RNA–Protein interactions for RNA: ENST00000369763.4

LRIF1-201, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene LRIF1, Length 3,475 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-201ENST00000369763 CPA1P15085 419 aa13.28□□□□□ -0.28
LRIF1-201ENST00000369763 CDK12Q9NYV4 1490 aaPredicted RBP13.28□□□□□ -0.28
LRIF1-201ENST00000369763 PTPRCP08575 1304 aa13.28□□□□□ -0.28
LRIF1-201ENST00000369763 PTMSP20962 102 aa13.28□□□□□ -0.28
LRIF1-201ENST00000369763 ZSCAN30Q86W11 494 aa13.28□□□□□ -0.28
LRIF1-201ENST00000369763 KNDC1Q76NI1 1749 aa13.27□□□□□ -0.28
LRIF1-201ENST00000369763 SURF6O75683 361 aaKnown RBP13.27□□□□□ -0.28
LRIF1-201ENST00000369763 PREX1Q8TCU6 1659 aa13.27□□□□□ -0.28
LRIF1-201ENST00000369763 HAP1P54257 671 aaPredicted RBP13.27□□□□□ -0.28
LRIF1-201ENST00000369763 ESYT1Q9BSJ8 1104 aa13.27□□□□□ -0.28
LRIF1-201ENST00000369763 CYP2E1P05181 493 aaPredicted RBP13.27□□□□□ -0.29
LRIF1-201ENST00000369763 PTMAP06454 111 aaKnown RBP13.27□□□□□ -0.29
LRIF1-201ENST00000369763 LTKP29376 864 aa13.27□□□□□ -0.29
LRIF1-201ENST00000369763 GADD45BO75293 160 aaPredicted RBP13.26□□□□□ -0.29
LRIF1-201ENST00000369763 AATKQ6ZMQ8 1374 aa13.26□□□□□ -0.29
LRIF1-201ENST00000369763 CCT4P50991 539 aaKnown RBP13.26□□□□□ -0.29
LRIF1-201ENST00000369763 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
LRIF1-201ENST00000369763 CWC22Q9HCG8 908 aaKnown RBP13.26□□□□□ -0.29
LRIF1-201ENST00000369763 SPG7Q9UQ90 795 aa13.25□□□□□ -0.29
LRIF1-201ENST00000369763 KIF20BQ96Q89 1820 aa13.25□□□□□ -0.29
LRIF1-201ENST00000369763 UBTFL1P0CB47 393 aaPredicted RBP13.25□□□□□ -0.29
LRIF1-201ENST00000369763 CHMLP26374 656 aa13.25□□□□□ -0.29
LRIF1-201ENST00000369763 ZNF830Q96NB3 372 aaPredicted RBP13.25□□□□□ -0.29
LRIF1-201ENST00000369763 MCCP23508 829 aa13.25□□□□□ -0.29
LRIF1-201ENST00000369763 OS9Q13438 667 aaPredicted RBP13.25□□□□□ -0.29
LRIF1-201ENST00000369763 CHMP3Q9Y3E7 222 aa13.25□□□□□ -0.29
LRIF1-201ENST00000369763 CWC27Q6UX04 472 aaKnown RBP13.24□□□□□ -0.29
LRIF1-201ENST00000369763 HDGFL1Q5TGJ6 251 aa13.24□□□□□ -0.29
LRIF1-201ENST00000369763 ZNF445P59923 1031 aa13.23□□□□□ -0.29
LRIF1-201ENST00000369763 PPP1R9BQ96SB3 815 aa13.23□□□□□ -0.29
LRIF1-201ENST00000369763 TSPOAP1O95153 1857 aa13.23□□□□□ -0.29
LRIF1-201ENST00000369763 SRGAP3O43295 1099 aa13.23□□□□□ -0.29
LRIF1-201ENST00000369763 CCDC30Q5VVM6 783 aa13.23□□□□□ -0.29
LRIF1-201ENST00000369763 PPP1R42Q7Z4L9 355 aa13.23□□□□□ -0.29
LRIF1-201ENST00000369763 IL17REQ8NFR9 667 aa13.22□□□□□ -0.29
LRIF1-201ENST00000369763 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
LRIF1-201ENST00000369763 DLG5Q8TDM6 1919 aa13.22□□□□□ -0.29
LRIF1-201ENST00000369763 ANKRD26Q9UPS8 1709 aa13.22□□□□□ -0.29
LRIF1-201ENST00000369763 NBPF7P0C2Y1 421 aaPredicted RBP13.22□□□□□ -0.29
LRIF1-201ENST00000369763 HDGFP51858 240 aaKnown RBP13.22□□□□□ -0.29
LRIF1-201ENST00000369763 USP44Q9H0E7 712 aa13.22□□□□□ -0.29
LRIF1-201ENST00000369763 CLEC17AQ6ZS10 378 aa13.22□□□□□ -0.29
LRIF1-201ENST00000369763 CRB1P82279 1406 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 FIBPO43427 364 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 KCNQ3O43525 872 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 GNAI3P08754 354 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 ABTB2Q8N961 1025 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 CDC42BPGQ6DT37 1551 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 LMOD2Q6P5Q4 547 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 LRSAM1Q6UWE0 723 aa13.21□□□□□ -0.29
LRIF1-201ENST00000369763 ATP8B2P98198 1209 aa13.21□□□□□ -0.3
LRIF1-201ENST00000369763 DNTTIP2Q5QJE6 756 aaKnown RBP13.21□□□□□ -0.3
LRIF1-201ENST00000369763 USP48Q86UV5 1035 aa13.21□□□□□ -0.3
LRIF1-201ENST00000369763 JARID2Q92833 1246 aaPredicted RBP13.21□□□□□ -0.3
LRIF1-201ENST00000369763 C17orf53Q8N3J3 647 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-201ENST00000369763 CNPY2Q9Y2B0 182 aa13.2□□□□□ -0.3
LRIF1-201ENST00000369763 KIAA0232Q92628 1395 aa13.2□□□□□ -0.3
LRIF1-201ENST00000369763 TAF7Q15545 349 aaPredicted RBP13.2□□□□□ -0.3
LRIF1-201ENST00000369763 BRD1O95696 1058 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 RASEFQ8IZ41 740 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 LGR6Q9HBX8 967 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 RICTORQ6R327 1708 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 CLTCQ00610 1675 aaKnown RBP13.19□□□□□ -0.3
LRIF1-201ENST00000369763 KIF24Q5T7B8 1368 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 PI4KAP2A4QPH2 592 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 PI4KAP1Q8N8J0 262 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 TCEANC2Q96MN5 208 aa13.19□□□□□ -0.3
LRIF1-201ENST00000369763 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.19□□□□□ -0.3
LRIF1-201ENST00000369763 PA2G4Q9UQ80 394 aaKnown RBP13.19□□□□□ -0.3
LRIF1-201ENST00000369763 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.18□□□□□ -0.3
LRIF1-201ENST00000369763 CHPF2Q9P2E5 772 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 USP25Q9UHP3 1055 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 SOS1Q07889 1333 aaPredicted RBP13.18□□□□□ -0.3
LRIF1-201ENST00000369763 GLIPR1L2Q4G1C9 344 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 FAM177BA6PVY3 158 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 TSC1Q92574 1164 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 OSBPL3Q9H4L5 887 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 DLC1Q96QB1 1528 aa13.18□□□□□ -0.3
LRIF1-201ENST00000369763 TSPY26PQ9H489 355 aa13.17□□□□□ -0.3
LRIF1-201ENST00000369763 CCDC9Q9Y3X0 531 aaKnown RBP13.17□□□□□ -0.3
LRIF1-201ENST00000369763 RRP9O43818 475 aaKnown RBP13.17□□□□□ -0.3
LRIF1-201ENST00000369763 OFD1O75665 1012 aa13.17□□□□□ -0.3
LRIF1-201ENST00000369763 MPRIPQ6WCQ1 1025 aa13.17□□□□□ -0.3
LRIF1-201ENST00000369763 RHPN1Q8TCX5 695 aa13.17□□□□□ -0.3
LRIF1-201ENST00000369763 SRCIN1Q9C0H9 1055 aa13.17□□□□□ -0.3
LRIF1-201ENST00000369763 RIMS1Q86UR5 1692 aaKnown RBP13.17□□□□□ -0.3
LRIF1-201ENST00000369763 CASTP20810 708 aaKnown RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 AIMP1Q12904 312 aaKnown RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 CCDC83Q8IWF9 413 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 USP6P35125 1406 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 UQCRHLA0A096LP55 91 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 PLEKHG3A1L390 1219 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 VPS37CA5D8V6 355 aaPredicted RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 UQCRHP07919 91 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 HCLS1P14317 486 aaPredicted RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 AK2P54819 239 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 FERMT3Q86UX7 667 aa13.16□□□□□ -0.3
LRIF1-201ENST00000369763 LRRC59Q96AG4 307 aaKnown RBP13.16□□□□□ -0.3
LRIF1-201ENST00000369763 LARGE1O95461 756 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms