RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 NUP188Q5SRE5 1749 aa24.69■■□□□ 1.54
LMNA-204ENST00000368298 SLC27A3Q5K4L6 730 aa24.68■■□□□ 1.54
LMNA-204ENST00000368298 CCDC146Q8IYE0 955 aa24.68■■□□□ 1.54
LMNA-204ENST00000368298 ATG3Q9NT62 314 aa24.68■■□□□ 1.54
LMNA-204ENST00000368298 ASAP1Q9ULH1 1129 aa24.68■■□□□ 1.54
LMNA-204ENST00000368298 PALLDQ8WX93 1383 aa24.67■■□□□ 1.54
LMNA-204ENST00000368298 CCER2I3L3R5 266 aa24.67■■□□□ 1.54
LMNA-204ENST00000368298 TMPOP42166 694 aaKnown RBP24.67■■□□□ 1.54
LMNA-204ENST00000368298 RTF1Q92541 710 aaKnown RBP24.67■■□□□ 1.54
LMNA-204ENST00000368298 SIPA1L3O60292 1781 aaPredicted RBP24.67■■□□□ 1.54
LMNA-204ENST00000368298 LRRC4BQ9NT99 713 aa24.64■■□□□ 1.54
LMNA-204ENST00000368298 RIPK4P57078 832 aa24.64■■□□□ 1.53
LMNA-204ENST00000368298 TEFQ10587 303 aa24.64■■□□□ 1.53
LMNA-204ENST00000368298 MCM10Q7L590 875 aa24.64■■□□□ 1.53
LMNA-204ENST00000368298 ZNF831Q5JPB2 1677 aa24.63■■□□□ 1.53
LMNA-204ENST00000368298 PAPPAQ13219 1627 aa24.63■■□□□ 1.53
LMNA-204ENST00000368298 HMGB2P26583 209 aaKnown RBP24.62■■□□□ 1.53
LMNA-204ENST00000368298 LMOD3Q0VAK6 560 aa24.61■■□□□ 1.53
LMNA-204ENST00000368298 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
LMNA-204ENST00000368298 CCNL1Q9UK58 526 aaPredicted RBP24.61■■□□□ 1.53
LMNA-204ENST00000368298 LOC102724428A0A0B4J2F2 783 aa24.6■■□□□ 1.53
LMNA-204ENST00000368298 SIK1P57059 783 aa24.6■■□□□ 1.53
LMNA-204ENST00000368298 APAF1O14727 1248 aa24.59■■□□□ 1.53
LMNA-204ENST00000368298 NBPF14Q5TI25 921 aa24.58■■□□□ 1.53
LMNA-204ENST00000368298 TAF1LQ8IZX4 1826 aa24.58■■□□□ 1.53
LMNA-204ENST00000368298 TRIM35Q9UPQ4 493 aa24.58■■□□□ 1.52
LMNA-204ENST00000368298 RRP7AQ9Y3A4 280 aaKnown RBP24.58■■□□□ 1.52
LMNA-204ENST00000368298 UBR2Q8IWV8 1755 aa24.57■■□□□ 1.52
LMNA-204ENST00000368298 TAF7Q15545 349 aaPredicted RBP24.57■■□□□ 1.52
LMNA-204ENST00000368298 NCBP3Q53F19 620 aaKnown RBP24.57■■□□□ 1.52
LMNA-204ENST00000368298 CICQ96RK0 1608 aaPredicted RBP24.57■■□□□ 1.52
LMNA-204ENST00000368298 KCNQ4P56696 695 aa24.56■■□□□ 1.52
LMNA-204ENST00000368298 SLC39A6Q13433 755 aa24.56■■□□□ 1.52
LMNA-204ENST00000368298 SLC4A9Q96Q91 983 aa24.56■■□□□ 1.52
LMNA-204ENST00000368298 C5P01031 1676 aa24.56■■□□□ 1.52
LMNA-204ENST00000368298 KCPQ6ZWJ8 1503 aa24.55■■□□□ 1.52
LMNA-204ENST00000368298 NEUROD2Q15784 382 aa24.55■■□□□ 1.52
LMNA-204ENST00000368298 ZNF790Q6PG37 636 aa24.55■■□□□ 1.52
LMNA-204ENST00000368298 FAM9BQ8IZU0 186 aa24.55■■□□□ 1.52
LMNA-204ENST00000368298 ANO8Q9HCE9 1232 aaPredicted RBP24.55■■□□□ 1.52
LMNA-204ENST00000368298 BTBD11A6QL63 1104 aa24.54■■□□□ 1.52
LMNA-204ENST00000368298 ATP6V1AP38606 617 aa24.53■■□□□ 1.52
LMNA-204ENST00000368298 AKT1S1Q96B36 256 aa24.53■■□□□ 1.52
LMNA-204ENST00000368298 RBM42Q9BTD8 480 aaKnown RBP24.53■■□□□ 1.52
LMNA-204ENST00000368298 THUMPD2Q9BTF0 503 aaKnown RBP24.53■■□□□ 1.52
LMNA-204ENST00000368298 PSDA5PKW4 1024 aaPredicted RBP24.52■■□□□ 1.52
LMNA-204ENST00000368298 PTCD1O75127 700 aaKnown RBP24.52■■□□□ 1.52
LMNA-204ENST00000368298 SLC15A2Q16348 729 aa24.52■■□□□ 1.52
LMNA-204ENST00000368298 ITPK1Q13572 414 aa24.51■■□□□ 1.51
LMNA-204ENST00000368298 TTC5Q8N0Z6 440 aa24.51■■□□□ 1.51
LMNA-204ENST00000368298 VSIG10Q8N0Z9 540 aa24.51■■□□□ 1.51
LMNA-204ENST00000368298 STK32BQ9NY57 414 aa24.51■■□□□ 1.51
LMNA-204ENST00000368298 CCDC27Q2M243 656 aa24.51■■□□□ 1.51
LMNA-204ENST00000368298 BABAM1Q9NWV8 329 aa24.51■■□□□ 1.51
LMNA-204ENST00000368298 ZNF827Q17R98 1081 aa24.5■■□□□ 1.51
LMNA-204ENST00000368298 C4BP0C0L5 1744 aa24.5■■□□□ 1.51
LMNA-204ENST00000368298 COL5A3P25940 1745 aaPredicted RBP24.5■■□□□ 1.51
LMNA-204ENST00000368298 KDM3BQ7LBC6 1761 aa24.49■■□□□ 1.51
LMNA-204ENST00000368298 TJP1Q07157 1748 aa24.48■■□□□ 1.51
LMNA-204ENST00000368298 SRCAPQ6ZRS2 3230 aa24.48■■□□□ 1.51
LMNA-204ENST00000368298 R3HDM1Q15032 1099 aaKnown RBP24.48■■□□□ 1.51
LMNA-204ENST00000368298 LINC00116Q8NCU8 138 aa24.48■■□□□ 1.51
LMNA-204ENST00000368298 ZNF496Q96IT1 587 aaPredicted RBP24.48■■□□□ 1.51
LMNA-204ENST00000368298 QSER1Q2KHR3 1735 aa24.48■■□□□ 1.51
LMNA-204ENST00000368298 KCNQ3O43525 872 aa24.47■■□□□ 1.51
LMNA-204ENST00000368298 NGEFQ8N5V2 710 aa24.47■■□□□ 1.51
LMNA-204ENST00000368298 FMNL2Q96PY5 1086 aa24.47■■□□□ 1.51
LMNA-204ENST00000368298 HEG1Q9ULI3 1381 aa24.46■■□□□ 1.51
LMNA-204ENST00000368298 RC3H1Q5TC82 1133 aaKnown RBP24.46■■□□□ 1.51
LMNA-204ENST00000368298 CENPBP07199 599 aaPredicted RBP24.45■■□□□ 1.51
LMNA-204ENST00000368298 YTHDC1Q96MU7 727 aaKnown RBP24.45■■□□□ 1.51
LMNA-204ENST00000368298 CHL1O00533 1208 aa24.45■■□□□ 1.5
LMNA-204ENST00000368298 MIS18AQ9NYP9 233 aa24.45■■□□□ 1.5
LMNA-204ENST00000368298 CNTNAP4Q9C0A0 1308 aa24.44■■□□□ 1.5
LMNA-204ENST00000368298 CALD1Q05682 793 aaKnown RBP24.44■■□□□ 1.5
LMNA-204ENST00000368298 WWC1Q8IX03 1113 aa24.43■■□□□ 1.5
LMNA-204ENST00000368298 TEX13AQ9BXU3 409 aaPredicted RBP24.43■■□□□ 1.5
LMNA-204ENST00000368298 TUBGCP6Q96RT7 1819 aa24.43■■□□□ 1.5
LMNA-204ENST00000368298 DNAJC10Q8IXB1 793 aa24.42■■□□□ 1.5
LMNA-204ENST00000368298 CFAP44Q96MT7 982 aa24.42■■□□□ 1.5
LMNA-204ENST00000368298 TFCP2L1Q9NZI6 479 aa24.42■■□□□ 1.5
LMNA-204ENST00000368298 UBR3Q6ZT12 1888 aa24.42■■□□□ 1.5
LMNA-204ENST00000368298 MYH14Q7Z406 1995 aaKnown RBP24.41■■□□□ 1.5
LMNA-204ENST00000368298 ZNF853P0CG23 659 aa24.41■■□□□ 1.5
LMNA-204ENST00000368298 CYP19A1P11511 503 aaPredicted RBP24.41■■□□□ 1.5
LMNA-204ENST00000368298 EIF4A1P60842 406 aaKnown RBP24.41■■□□□ 1.5
LMNA-204ENST00000368298 TSPYL4Q9UJ04 414 aa24.41■■□□□ 1.5
LMNA-204ENST00000368298 CASZ1Q86V15 1759 aa24.41■■□□□ 1.5
LMNA-204ENST00000368298 CRKLP46109 303 aaKnown RBP24.4■■□□□ 1.5
LMNA-204ENST00000368298 AK7Q96M32 723 aa24.4■■□□□ 1.5
LMNA-204ENST00000368298 PNPLA7Q6ZV29 1317 aa24.4■■□□□ 1.5
LMNA-204ENST00000368298 SNRPA1P09661 255 aaKnown RBP24.39■■□□□ 1.5
LMNA-204ENST00000368298 FLAD1Q8NFF5 587 aa24.38■■□□□ 1.49
LMNA-204ENST00000368298 IFT57Q9NWB7 429 aa24.38■■□□□ 1.49
LMNA-204ENST00000368298 RPS6KA4O75676 772 aa24.38■■□□□ 1.49
LMNA-204ENST00000368298 STARD3NLO95772 234 aa24.38■■□□□ 1.49
LMNA-204ENST00000368298 SSFA2P28290 1259 aa24.38■■□□□ 1.49
LMNA-204ENST00000368298 INTS5Q6P9B9 1019 aaKnown RBP24.38■■□□□ 1.49
LMNA-204ENST00000368298 LRP5O75197 1615 aa24.38■■□□□ 1.49
LMNA-204ENST00000368298 IL16Q14005 1332 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms