RNA–Protein interactions for RNA: ENST00000367367.8

PTPRC-203, Transcript of protein tyrosine phosphatase, receptor type C, humanhuman

TSL 2

Gene PTPRC, Length 2,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRC-203ENST00000367367 LRRC59Q96AG4 307 aaKnown RBP4.4□□□□□ -1.71
PTPRC-203ENST00000367367 EVC2Q86UK5 1308 aa4.4□□□□□ -1.71
PTPRC-203ENST00000367367 LAPTM4AQ15012 233 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 KRT28Q7Z3Y7 464 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 NGDNQ8NEJ9 315 aaKnown RBP4.39□□□□□ -1.71
PTPRC-203ENST00000367367 OXER1Q8TDS5 423 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 TESK2Q96S53 571 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 POLR3AO14802 1390 aaPredicted RBP4.39□□□□□ -1.71
PTPRC-203ENST00000367367 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.39□□□□□ -1.71
PTPRC-203ENST00000367367 NWD2Q9ULI1 1742 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 ACEP12821 1306 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 SPATA31A6Q5VVP1 1343 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 SPATA31A3Q5VYP0 1347 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 DPYSL4O14531 572 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 PRIM1P49642 420 aaKnown RBP4.39□□□□□ -1.71
PTPRC-203ENST00000367367 PSME1Q06323 249 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 KAT6BQ8WYB5 2073 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 NRAPQ86VF7 1730 aa4.39□□□□□ -1.71
PTPRC-203ENST00000367367 SRCAPQ6ZRS2 3230 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 CD163L1Q9NR16 1453 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 ADAMTS2O95450 1211 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 USP6P35125 1406 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 MEX3CQ5U5Q3 659 aaKnown RBP4.38□□□□□ -1.71
PTPRC-203ENST00000367367 DMRTA1Q5VZB9 504 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 CABLES1Q8TDN4 633 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 CABP1Q9NZU7 370 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 BRWD3Q6RI45 1802 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 USP54Q70EL1 1684 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 SBNO1A3KN83 1393 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 ATAD2Q6PL18 1390 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 MAP2P11137 1827 aaKnown RBP4.38□□□□□ -1.71
PTPRC-203ENST00000367367 TK2O00142 265 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 FLIIQ13045 1269 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 NUTM2GQ5VZR2 741 aa4.38□□□□□ -1.71
PTPRC-203ENST00000367367 DDX27Q96GQ7 796 aaKnown RBP4.38□□□□□ -1.71
PTPRC-203ENST00000367367 RGS17Q9UGC6 210 aaPredicted RBP4.38□□□□□ -1.71
PTPRC-203ENST00000367367 RGPD2P0DJD1 1756 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 COL14A1Q05707 1796 aaKnown RBP4.37□□□□□ -1.71
PTPRC-203ENST00000367367 IRF6O14896 467 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 AMHR2Q16671 573 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 TMC1Q8TDI8 760 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 C8orf37Q96NL8 207 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 A0A1W2PP64 1363 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 ARHGEF10O15013 1369 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 ANKRD26Q9UPS8 1709 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 CPSF1Q10570 1443 aaKnown RBP4.37□□□□□ -1.71
PTPRC-203ENST00000367367 PSEN2P49810 448 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 PROCA1Q8NCQ7 364 aaPredicted RBP4.37□□□□□ -1.71
PTPRC-203ENST00000367367 SLC12A5Q9H2X9 1139 aa4.37□□□□□ -1.71
PTPRC-203ENST00000367367 SSH2Q76I76 1423 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 WNK3Q9BYP7 1800 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 HSPA5P11021 654 aaKnown RBP4.36□□□□□ -1.71
PTPRC-203ENST00000367367 EIF4G2P78344 907 aaKnown RBP eCLIP4.36□□□□□ -1.71
PTPRC-203ENST00000367367 SMYD5Q6GMV2 418 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 PHOX2BQ99453 314 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 KTN1Q86UP2 1357 aaKnown RBP4.36□□□□□ -1.71
PTPRC-203ENST00000367367 LMO7Q8WWI1 1683 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 COL18A1P39060 1754 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 AFF2P51816 1311 aa4.36□□□□□ -1.71
PTPRC-203ENST00000367367 TMF1P82094 1093 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 TMCO4Q5TGY1 634 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 ZNF787Q6DD87 383 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 POTEAQ6S8J7 498 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 ABTB2Q8N961 1025 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 POLR3GLQ9BT43 218 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 SLIT3O75094 1523 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 GLI3P10071 1580 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.35□□□□□ -1.71
PTPRC-203ENST00000367367 DDRGK1Q96HY6 314 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 NGLY1Q96IV0 654 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 SLIT2O94813 1529 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 BCL9LQ86UU0 1499 aa4.35□□□□□ -1.71
PTPRC-203ENST00000367367 KIAA0232Q92628 1395 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 NINLQ9Y2I6 1382 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 NFAT5O94916 1531 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 SOX12O15370 315 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 SNRKQ9NRH2 765 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 EDC4Q6P2E9 1401 aaKnown RBP4.34□□□□□ -1.71
PTPRC-203ENST00000367367 TTC21BQ7Z4L5 1316 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 ANKRD36BQ8N2N9 1353 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 CAMTA1Q9Y6Y1 1673 aa4.34□□□□□ -1.71
PTPRC-203ENST00000367367 UNCXA6NJT0 531 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 C11orf95C9JLR9 678 aaPredicted RBP4.34□□□□□ -1.72
PTPRC-203ENST00000367367 NLRP6P59044 892 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 ZC3H6P61129 1189 aaKnown RBP4.34□□□□□ -1.72
PTPRC-203ENST00000367367 GIGYF2Q6Y7W6 1299 aaKnown RBP4.34□□□□□ -1.72
PTPRC-203ENST00000367367 NME9Q86XW9 330 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 USP21Q9UK80 565 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 COG6Q9Y2V7 657 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 OVOS2A0A0J9YW53 1432 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 OVOS2Q6IE36 1432 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 USP19O94966 1318 aa4.34□□□□□ -1.72
PTPRC-203ENST00000367367 BRD4O60885 1362 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-203ENST00000367367 PEAK1Q9H792 1746 aa4.33□□□□□ -1.72
PTPRC-203ENST00000367367 NSD3Q9BZ95 1437 aa4.33□□□□□ -1.72
PTPRC-203ENST00000367367 GFRA3O60609 400 aa4.33□□□□□ -1.72
PTPRC-203ENST00000367367 CHRNA2Q15822 529 aa4.33□□□□□ -1.72
PTPRC-203ENST00000367367 ZNF772Q68DY9 489 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-203ENST00000367367 HDGFL2Q7Z4V5 671 aaPredicted RBP4.33□□□□□ -1.72
PTPRC-203ENST00000367367 NLRP7Q8WX94 980 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms