RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 SIRT1Q96EB6 747 aa15.08■□□□□ 0
PTPN7-202ENST00000367279 MX1P20591 662 aa15.07■□□□□ 0
PTPN7-202ENST00000367279 MCCP23508 829 aa15.07■□□□□ 0
PTPN7-202ENST00000367279 CRB1P82279 1406 aa15.07■□□□□ 0
PTPN7-202ENST00000367279 DIP2BQ9P265 1576 aa15.07■□□□□ 0
PTPN7-202ENST00000367279 AGLP35573 1532 aa15.07■□□□□ 0
PTPN7-202ENST00000367279 UPF3BQ9BZI7 483 aaKnown RBP15.07■□□□□ 0
PTPN7-202ENST00000367279 C3P01024 1663 aa15.07■□□□□ 0
PTPN7-202ENST00000367279 NUTM1Q86Y26 1132 aa15.06■□□□□ 0
PTPN7-202ENST00000367279 RIMS1Q86UR5 1692 aaKnown RBP15.06■□□□□ 0
PTPN7-202ENST00000367279 GNAT3A8MTJ3 354 aa15.06■□□□□ 0
PTPN7-202ENST00000367279 GNAI3P08754 354 aa15.06■□□□□ 0
PTPN7-202ENST00000367279 OVOS2A0A0J9YW53 1432 aa15.05■□□□□ 0
PTPN7-202ENST00000367279 OVOS2Q6IE36 1432 aa15.05■□□□□ 0
PTPN7-202ENST00000367279 CWC22Q9HCG8 908 aaKnown RBP15.05■□□□□ 0
PTPN7-202ENST00000367279 ZSCAN23Q3MJ62 389 aa15.05■□□□□ -0
PTPN7-202ENST00000367279 ABTB2Q8N961 1025 aa15.05■□□□□ -0
PTPN7-202ENST00000367279 FLT4P35916 1363 aa15.05■□□□□ -0
PTPN7-202ENST00000367279 UBTFL1P0CB47 393 aaPredicted RBP15.05■□□□□ -0
PTPN7-202ENST00000367279 LMBRD1Q9NUN5 540 aa15.05■□□□□ -0
PTPN7-202ENST00000367279 TMX3Q96JJ7 454 aa15.04■□□□□ -0
PTPN7-202ENST00000367279 ESYT1Q9BSJ8 1104 aa15.04■□□□□ -0
PTPN7-202ENST00000367279 PALD1Q9ULE6 856 aa15.04■□□□□ -0
PTPN7-202ENST00000367279 AKAP12Q02952 1782 aa15.04■□□□□ -0
PTPN7-202ENST00000367279 HDGFL1Q5TGJ6 251 aa15.04■□□□□ -0
PTPN7-202ENST00000367279 RBM33Q96EV2 1170 aaKnown RBP15.04■□□□□ -0
PTPN7-202ENST00000367279 SURF6O75683 361 aaKnown RBP15.03■□□□□ -0
PTPN7-202ENST00000367279 CCDC173Q0VFZ6 552 aa15.03■□□□□ -0
PTPN7-202ENST00000367279 PHAXQ9H814 394 aaKnown RBP15.03■□□□□ -0
PTPN7-202ENST00000367279 TECPR2O15040 1411 aa15.03■□□□□ -0
PTPN7-202ENST00000367279 ARHGEF10O15013 1369 aa15.03■□□□□ -0
PTPN7-202ENST00000367279 SBNO1A3KN83 1393 aa15.02■□□□□ -0
PTPN7-202ENST00000367279 MSNP26038 577 aaKnown RBP15.02■□□□□ -0
PTPN7-202ENST00000367279 ADAMTS13Q76LX8 1427 aa15.02■□□□□ -0
PTPN7-202ENST00000367279 UNC5CLQ8IV45 518 aa15.02■□□□□ -0
PTPN7-202ENST00000367279 PEAK1Q9H792 1746 aa15.02■□□□□ -0
PTPN7-202ENST00000367279 ATP8B2P98198 1209 aa15.02□□□□□ -0.01
PTPN7-202ENST00000367279 OS9Q13438 667 aaPredicted RBP15.02□□□□□ -0.01
PTPN7-202ENST00000367279 RNF214Q8ND24 703 aa15.02□□□□□ -0.01
PTPN7-202ENST00000367279 REREQ9P2R6 1566 aa15.02□□□□□ -0.01
PTPN7-202ENST00000367279 SYCE3A1L190 88 aa15.02□□□□□ -0.01
PTPN7-202ENST00000367279 PRIM1P49642 420 aaKnown RBP15.02□□□□□ -0.01
PTPN7-202ENST00000367279 LARP6Q9BRS8 491 aaKnown RBP15.02□□□□□ -0.01
PTPN7-202ENST00000367279 ZDHHC9Q9Y397 364 aa15.02□□□□□ -0.01
PTPN7-202ENST00000367279 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.02□□□□□ -0.01
PTPN7-202ENST00000367279 ANXA1P04083 346 aa15.01□□□□□ -0.01
PTPN7-202ENST00000367279 IL17REQ8NFR9 667 aa15.01□□□□□ -0.01
PTPN7-202ENST00000367279 TTC21AQ8NDW8 1320 aa15.01□□□□□ -0.01
PTPN7-202ENST00000367279 CHMLP26374 656 aa15.01□□□□□ -0.01
PTPN7-202ENST00000367279 GPT2Q8TD30 523 aa15□□□□□ -0.01
PTPN7-202ENST00000367279 RBSNQ9H1K0 784 aa15□□□□□ -0.01
PTPN7-202ENST00000367279 GDPD2Q9HCC8 539 aa15□□□□□ -0.01
PTPN7-202ENST00000367279 TAF7Q15545 349 aaPredicted RBP15□□□□□ -0.01
PTPN7-202ENST00000367279 CYP2E1P05181 493 aaPredicted RBP15□□□□□ -0.01
PTPN7-202ENST00000367279 HOXC9P31274 260 aa15□□□□□ -0.01
PTPN7-202ENST00000367279 NSFL1CQ9UNZ2 370 aaKnown RBP15□□□□□ -0.01
PTPN7-202ENST00000367279 IGSF1Q8N6C5 1336 aa15□□□□□ -0.01
PTPN7-202ENST00000367279 NRKQ7Z2Y5 1582 aa15□□□□□ -0.01
PTPN7-202ENST00000367279 CEP170BQ9Y4F5 1589 aaPredicted RBP15□□□□□ -0.01
PTPN7-202ENST00000367279 SETD1BQ9UPS6 1966 aaKnown RBP14.99□□□□□ -0.01
PTPN7-202ENST00000367279 OSBPL3Q9H4L5 887 aa14.99□□□□□ -0.01
PTPN7-202ENST00000367279 USP31Q70CQ4 1352 aa14.99□□□□□ -0.01
PTPN7-202ENST00000367279 DTNBO60941 627 aa14.99□□□□□ -0.01
PTPN7-202ENST00000367279 CLEC17AQ6ZS10 378 aa14.99□□□□□ -0.01
PTPN7-202ENST00000367279 PPP1R42Q7Z4L9 355 aa14.99□□□□□ -0.01
PTPN7-202ENST00000367279 PTPRUQ92729 1446 aa14.99□□□□□ -0.01
PTPN7-202ENST00000367279 SRGAP3O43295 1099 aa14.98□□□□□ -0.01
PTPN7-202ENST00000367279 USP44Q9H0E7 712 aa14.98□□□□□ -0.01
PTPN7-202ENST00000367279 LMOD2Q6P5Q4 547 aa14.98□□□□□ -0.01
PTPN7-202ENST00000367279 SRCIN1Q9C0H9 1055 aa14.97□□□□□ -0.01
PTPN7-202ENST00000367279 TMEM63CQ9P1W3 806 aa14.97□□□□□ -0.01
PTPN7-202ENST00000367279 PLEKHG1Q9ULL1 1385 aa14.97□□□□□ -0.01
PTPN7-202ENST00000367279 ZNF445P59923 1031 aa14.97□□□□□ -0.01
PTPN7-202ENST00000367279 MAP3K5Q99683 1374 aa14.96□□□□□ -0.01
PTPN7-202ENST00000367279 IBTKQ9P2D0 1353 aaPredicted RBP14.96□□□□□ -0.01
PTPN7-202ENST00000367279 IL25Q9H293 177 aa14.96□□□□□ -0.02
PTPN7-202ENST00000367279 MCM2P49736 904 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 CWC27Q6UX04 472 aaKnown RBP14.95□□□□□ -0.02
PTPN7-202ENST00000367279 ZSCAN30Q86W11 494 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 NBPF7P0C2Y1 421 aaPredicted RBP14.95□□□□□ -0.02
PTPN7-202ENST00000367279 KCNA6P17658 529 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 KIAA1211Q6ZU35 1233 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 LGR6Q9HBX8 967 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 CHPF2Q9P2E5 772 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 PI4KAP2A4QPH2 592 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 PI4KAP1Q8N8J0 262 aa14.95□□□□□ -0.02
PTPN7-202ENST00000367279 TEFQ10587 303 aa14.94□□□□□ -0.02
PTPN7-202ENST00000367279 MPNDQ8N594 471 aa14.94□□□□□ -0.02
PTPN7-202ENST00000367279 SPG7Q9UQ90 795 aa14.94□□□□□ -0.02
PTPN7-202ENST00000367279 KCNQ3O43525 872 aa14.94□□□□□ -0.02
PTPN7-202ENST00000367279 PTMAP06454 111 aaKnown RBP14.94□□□□□ -0.02
PTPN7-202ENST00000367279 RHPN1Q8TCX5 695 aa14.94□□□□□ -0.02
PTPN7-202ENST00000367279 PPP1R9BQ96SB3 815 aa14.94□□□□□ -0.02
PTPN7-202ENST00000367279 KDRP35968 1356 aa14.93□□□□□ -0.02
PTPN7-202ENST00000367279 UBR1Q8IWV7 1749 aa14.93□□□□□ -0.02
PTPN7-202ENST00000367279 HTATSF1O43719 755 aaKnown RBP14.93□□□□□ -0.02
PTPN7-202ENST00000367279 DDX54Q8TDD1 881 aaKnown RBP14.93□□□□□ -0.02
PTPN7-202ENST00000367279 SOS1Q07889 1333 aaPredicted RBP14.93□□□□□ -0.02
PTPN7-202ENST00000367279 MPRIPQ6WCQ1 1025 aa14.93□□□□□ -0.02
PTPN7-202ENST00000367279 SALL3Q9BXA9 1300 aa14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms