RNA–Protein interactions for RNA: ENST00000367178.7

SCAF8-201, Transcript of SR-related CTD associated factor 8, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SCAF8, Length 5,057 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-201ENST00000367178 SOGA3Q5TF21 947 aa19.54■□□□□ 0.72
SCAF8-201ENST00000367178 CASTP20810 708 aaKnown RBP19.54■□□□□ 0.72
SCAF8-201ENST00000367178 MNS1Q8NEH6 495 aa19.53■□□□□ 0.72
SCAF8-201ENST00000367178 ANKRD24Q8TF21 1146 aa19.53■□□□□ 0.72
SCAF8-201ENST00000367178 FILIP1LQ4L180 1135 aa19.53■□□□□ 0.72
SCAF8-201ENST00000367178 ZSCAN29Q8IWY8 852 aaPredicted RBP19.53■□□□□ 0.72
SCAF8-201ENST00000367178 TRMT112Q9UI30 125 aaKnown RBP19.53■□□□□ 0.72
SCAF8-201ENST00000367178 CT47A1Q5JQC4 288 aaPredicted RBP19.53■□□□□ 0.72
SCAF8-201ENST00000367178 NGLY1Q96IV0 654 aa19.53■□□□□ 0.72
SCAF8-201ENST00000367178 TRAPPC8Q9Y2L5 1435 aa19.52■□□□□ 0.72
SCAF8-201ENST00000367178 IL16Q14005 1332 aa19.52■□□□□ 0.72
SCAF8-201ENST00000367178 TEX14Q8IWB6 1497 aa19.52■□□□□ 0.72
SCAF8-201ENST00000367178 KRT18P05783 430 aaKnown RBP19.52■□□□□ 0.72
SCAF8-201ENST00000367178 HSP90AB2PQ58FF8 381 aa19.52■□□□□ 0.72
SCAF8-201ENST00000367178 UPF3BQ9BZI7 483 aaKnown RBP19.52■□□□□ 0.72
SCAF8-201ENST00000367178 WDR7Q9Y4E6 1490 aa19.52■□□□□ 0.72
SCAF8-201ENST00000367178 CCAR1Q8IX12 1150 aaKnown RBP19.52■□□□□ 0.72
SCAF8-201ENST00000367178 CCDC8Q9H0W5 538 aaPredicted RBP19.52■□□□□ 0.72
SCAF8-201ENST00000367178 CCDC192P0DO97 292 aa19.52■□□□□ 0.71
SCAF8-201ENST00000367178 TNMDQ9H2S6 317 aa19.52■□□□□ 0.71
SCAF8-201ENST00000367178 U3KPZ7 1027 aaPredicted RBP19.52■□□□□ 0.71
SCAF8-201ENST00000367178 CHRNA2Q15822 529 aa19.51■□□□□ 0.71
SCAF8-201ENST00000367178 ZBTB3Q9H5J0 574 aa19.51■□□□□ 0.71
SCAF8-201ENST00000367178 RALGAPBQ86X10 1494 aa19.51■□□□□ 0.71
SCAF8-201ENST00000367178 TTC21AQ8NDW8 1320 aa19.51■□□□□ 0.71
SCAF8-201ENST00000367178 NOL7Q9UMY1 257 aaKnown RBP19.51■□□□□ 0.71
SCAF8-201ENST00000367178 SKAP1Q86WV1 359 aa19.51■□□□□ 0.71
SCAF8-201ENST00000367178 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
SCAF8-201ENST00000367178 PRPF40BQ6NWY9 871 aaKnown RBP19.51■□□□□ 0.71
SCAF8-201ENST00000367178 DMRT2Q9Y5R5 561 aa19.51■□□□□ 0.71
SCAF8-201ENST00000367178 CAVIN4Q5BKX8 364 aa19.5■□□□□ 0.71
SCAF8-201ENST00000367178 TNNT3P45378 269 aaPredicted RBP19.5■□□□□ 0.71
SCAF8-201ENST00000367178 NUP160Q12769 1436 aa19.5■□□□□ 0.71
SCAF8-201ENST00000367178 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
SCAF8-201ENST00000367178 MAGEC2Q9UBF1 373 aaPredicted RBP19.5■□□□□ 0.71
SCAF8-201ENST00000367178 CFAP45Q9UL16 551 aa19.5■□□□□ 0.71
SCAF8-201ENST00000367178 PRAG1Q86YV5 1406 aa19.49■□□□□ 0.71
SCAF8-201ENST00000367178 ITSN2Q9NZM3 1697 aa19.49■□□□□ 0.71
SCAF8-201ENST00000367178 PDIA4P13667 645 aaKnown RBP19.49■□□□□ 0.71
SCAF8-201ENST00000367178 FAM13BQ9NYF5 915 aa19.49■□□□□ 0.71
SCAF8-201ENST00000367178 MAP3K2Q9Y2U5 619 aa19.49■□□□□ 0.71
SCAF8-201ENST00000367178 BRPF1P55201 1214 aaPredicted RBP19.48■□□□□ 0.71
SCAF8-201ENST00000367178 PI4KAP2A4QPH2 592 aa19.48■□□□□ 0.71
SCAF8-201ENST00000367178 PI4KAP1Q8N8J0 262 aa19.48■□□□□ 0.71
SCAF8-201ENST00000367178 DDX11Q96FC9 970 aa19.48■□□□□ 0.71
SCAF8-201ENST00000367178 TEX13AQ9BXU3 409 aaPredicted RBP19.48■□□□□ 0.71
SCAF8-201ENST00000367178 GPTP24298 496 aa19.48■□□□□ 0.71
SCAF8-201ENST00000367178 MCM4P33991 863 aa19.48■□□□□ 0.71
SCAF8-201ENST00000367178 RIMS2Q9UQ26 1411 aa19.48■□□□□ 0.71
SCAF8-201ENST00000367178 PIK3R4Q99570 1358 aa19.47■□□□□ 0.71
SCAF8-201ENST00000367178 ANKRD18BA2A2Z9 1011 aa19.47■□□□□ 0.71
SCAF8-201ENST00000367178 WASF1Q92558 559 aa19.46■□□□□ 0.71
SCAF8-201ENST00000367178 ODF2Q5BJF6 829 aa19.46■□□□□ 0.71
SCAF8-201ENST00000367178 SMARCE1Q969G3 411 aa19.46■□□□□ 0.71
SCAF8-201ENST00000367178 PPIP5K1Q6PFW1 1433 aa19.46■□□□□ 0.71
SCAF8-201ENST00000367178 DCAF8L1A6NGE4 600 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 MAP3K12Q12852 859 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 NAPBQ9H115 298 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 ARGLU1Q9NWB6 273 aaPredicted RBP19.45■□□□□ 0.7
SCAF8-201ENST00000367178 MAPKBP1O60336 1514 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 ATP5J2-PTCD1G3V325 749 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 SERPINC1P01008 464 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 SNRPA1P09661 255 aaKnown RBP19.45■□□□□ 0.7
SCAF8-201ENST00000367178 CCDC83Q8IWF9 413 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 MINDY4BA8MYZ0 360 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 TTLL5Q6EMB2 1281 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 ECHDC1Q9NTX5 307 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 MSH6P52701 1360 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 ABCC10Q5T3U5 1492 aa19.45■□□□□ 0.7
SCAF8-201ENST00000367178 SLC5A1P13866 664 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 TMOD2Q9NZR1 351 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 ANXA1P04083 346 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 CCDC173Q0VFZ6 552 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 STIM1Q13586 685 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 UBE3BQ7Z3V4 1068 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 DACH1Q9UI36 760 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 KIAA0556O60303 1618 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 ASXL1Q8IXJ9 1541 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 FERMT3Q86UX7 667 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 ANKIB1Q9P2G1 1089 aa19.44■□□□□ 0.7
SCAF8-201ENST00000367178 PIBF1Q8WXW3 757 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 ZHX3Q9H4I2 956 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 NPHP3Q7Z494 1330 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 CWC25Q9NXE8 425 aaPredicted RBP19.43■□□□□ 0.7
SCAF8-201ENST00000367178 USP5P45974 858 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 TMEM132AQ24JP5 1023 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 PPP1R42Q7Z4L9 355 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 SPC24Q8NBT2 197 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 ZNF287Q9HBT7 754 aa19.43■□□□□ 0.7
SCAF8-201ENST00000367178 ADAMTS12P58397 1594 aa19.42■□□□□ 0.7
SCAF8-201ENST00000367178 NUP62CLQ9H1M0 184 aa19.42■□□□□ 0.7
SCAF8-201ENST00000367178 ZFYVE27Q5T4F4 411 aa19.42■□□□□ 0.7
SCAF8-201ENST00000367178 CNKSR2Q8WXI2 1034 aa19.42■□□□□ 0.7
SCAF8-201ENST00000367178 ARHGAP45Q92619 1136 aa19.42■□□□□ 0.7
SCAF8-201ENST00000367178 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
SCAF8-201ENST00000367178 LDHAL6AQ6ZMR3 332 aa19.41■□□□□ 0.7
SCAF8-201ENST00000367178 DZIP1Q86YF9 867 aaKnown RBP19.41■□□□□ 0.7
SCAF8-201ENST00000367178 POLR3DP05423 398 aaPredicted RBP19.41■□□□□ 0.7
SCAF8-201ENST00000367178 PUS7Q96PZ0 661 aaKnown RBP19.41■□□□□ 0.7
SCAF8-201ENST00000367178 SH2B1Q9NRF2 756 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms