RNA–Protein interactions for RNA: ENST00000366822.2

LINC01558-201, Transcript of long intergenic non-protein coding RNA 1558, humanhuman

TSL 2

Gene LINC01558, Length 1,173 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558-201ENST00000366822 SLC52A2Q9HAB3 445 aa22.94■■□□□ 1.26
LINC01558-201ENST00000366822 TEFQ10587 303 aa22.93■■□□□ 1.26
LINC01558-201ENST00000366822 CABP4P57796 275 aa22.92■■□□□ 1.26
LINC01558-201ENST00000366822 GOLGA2Q08379 1002 aa22.91■■□□□ 1.26
LINC01558-201ENST00000366822 TAF7Q15545 349 aaPredicted RBP22.91■■□□□ 1.26
LINC01558-201ENST00000366822 IFT57Q9NWB7 429 aa22.91■■□□□ 1.26
LINC01558-201ENST00000366822 NHSQ6T4R5 1651 aa22.9■■□□□ 1.26
LINC01558-201ENST00000366822 ZNF853P0CG23 659 aa22.9■■□□□ 1.26
LINC01558-201ENST00000366822 NFATC2IPQ8NCF5 419 aa22.9■■□□□ 1.26
LINC01558-201ENST00000366822 ACSBG1Q96GR2 724 aa22.9■■□□□ 1.26
LINC01558-201ENST00000366822 DOT1LQ8TEK3 1739 aa22.9■■□□□ 1.26
LINC01558-201ENST00000366822 VIRMAQ69YN4 1812 aaKnown RBP22.89■■□□□ 1.26
LINC01558-201ENST00000366822 NUP188Q5SRE5 1749 aa22.89■■□□□ 1.26
LINC01558-201ENST00000366822 PRIM1P49642 420 aaKnown RBP22.89■■□□□ 1.25
LINC01558-201ENST00000366822 CFAP44Q96MT7 982 aa22.89■■□□□ 1.25
LINC01558-201ENST00000366822 SPINK5Q9NQ38 1064 aaPredicted RBP22.89■■□□□ 1.25
LINC01558-201ENST00000366822 BABAM1Q9NWV8 329 aa22.89■■□□□ 1.25
LINC01558-201ENST00000366822 CHL1O00533 1208 aa22.88■■□□□ 1.25
LINC01558-201ENST00000366822 GNAI1P63096 354 aa22.88■■□□□ 1.25
LINC01558-201ENST00000366822 TMOD3Q9NYL9 352 aa22.88■■□□□ 1.25
LINC01558-201ENST00000366822 SIPA1L3O60292 1781 aaPredicted RBP22.87■■□□□ 1.25
LINC01558-201ENST00000366822 E9PSI1 815 aa22.87■■□□□ 1.25
LINC01558-201ENST00000366822 SLFN5Q08AF3 891 aa22.87■■□□□ 1.25
LINC01558-201ENST00000366822 PIGBQ92521 554 aa22.87■■□□□ 1.25
LINC01558-201ENST00000366822 CDCA7LQ96GN5 454 aa22.87■■□□□ 1.25
LINC01558-201ENST00000366822 KAT6BQ8WYB5 2073 aa22.86■■□□□ 1.25
LINC01558-201ENST00000366822 BTBD11A6QL63 1104 aa22.86■■□□□ 1.25
LINC01558-201ENST00000366822 KCNQ2O43526 872 aa22.86■■□□□ 1.25
LINC01558-201ENST00000366822 TRIM37O94972 964 aa22.86■■□□□ 1.25
LINC01558-201ENST00000366822 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
LINC01558-201ENST00000366822 LAS1LQ9Y4W2 734 aaKnown RBP22.86■■□□□ 1.25
LINC01558-201ENST00000366822 EN1Q05925 392 aaPredicted RBP22.85■■□□□ 1.25
LINC01558-201ENST00000366822 MIS18AQ9NYP9 233 aa22.85■■□□□ 1.25
LINC01558-201ENST00000366822 ITGB4P16144 1822 aa22.85■■□□□ 1.25
LINC01558-201ENST00000366822 TRMT2AQ8IZ69 625 aaKnown RBP22.84■■□□□ 1.25
LINC01558-201ENST00000366822 MYH16Q9H6N6 1097 aa22.84■■□□□ 1.25
LINC01558-201ENST00000366822 MBIPQ9NS73 344 aa22.84■■□□□ 1.25
LINC01558-201ENST00000366822 TSPYL4Q9UJ04 414 aa22.84■■□□□ 1.25
LINC01558-201ENST00000366822 BTAF1O14981 1849 aa22.83■■□□□ 1.25
LINC01558-201ENST00000366822 PTF1AQ7RTS3 328 aa22.82■■□□□ 1.24
LINC01558-201ENST00000366822 BCL11BQ9C0K0 894 aaPredicted RBP22.82■■□□□ 1.24
LINC01558-201ENST00000366822 FANCIQ9NVI1 1328 aa22.82■■□□□ 1.24
LINC01558-201ENST00000366822 APBA3O96018 575 aa22.81■■□□□ 1.24
LINC01558-201ENST00000366822 PAPPAQ13219 1627 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 KCNQ3O43525 872 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 SLC39A6Q13433 755 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 DUSP27Q5VZP5 1158 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 ZNF790Q6PG37 636 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 TSR2Q969E8 191 aaKnown RBP22.8■■□□□ 1.24
LINC01558-201ENST00000366822 ATG3Q9NT62 314 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 KDM3BQ7LBC6 1761 aa22.8■■□□□ 1.24
LINC01558-201ENST00000366822 ASAP1Q9ULH1 1129 aa22.79■■□□□ 1.24
LINC01558-201ENST00000366822 TTC5Q8N0Z6 440 aa22.77■■□□□ 1.24
LINC01558-201ENST00000366822 EIF4A1P60842 406 aaKnown RBP22.76■■□□□ 1.23
LINC01558-201ENST00000366822 EZH2Q15910 746 aaKnown RBP22.76■■□□□ 1.23
LINC01558-201ENST00000366822 SMARCC1Q92922 1105 aaPredicted RBP22.76■■□□□ 1.23
LINC01558-201ENST00000366822 KCPQ6ZWJ8 1503 aa22.75■■□□□ 1.23
LINC01558-201ENST00000366822 HEG1Q9ULI3 1381 aa22.75■■□□□ 1.23
LINC01558-201ENST00000366822 ZNF496Q96IT1 587 aaPredicted RBP22.74■■□□□ 1.23
LINC01558-201ENST00000366822 PSDA5PKW4 1024 aaPredicted RBP22.73■■□□□ 1.23
LINC01558-201ENST00000366822 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
LINC01558-201ENST00000366822 FMNL2Q96PY5 1086 aa22.73■■□□□ 1.23
LINC01558-201ENST00000366822 CAMKK2Q96RR4 588 aa22.73■■□□□ 1.23
LINC01558-201ENST00000366822 PALLDQ8WX93 1383 aa22.73■■□□□ 1.23
LINC01558-201ENST00000366822 UBR2Q8IWV8 1755 aa22.73■■□□□ 1.23
LINC01558-201ENST00000366822 KRT24Q2M2I5 525 aa22.71■■□□□ 1.23
LINC01558-201ENST00000366822 C8orf58Q8NAV2 365 aa22.71■■□□□ 1.23
LINC01558-201ENST00000366822 PTCD1O75127 700 aaKnown RBP22.7■■□□□ 1.22
LINC01558-201ENST00000366822 GIGYF1O75420 1035 aaPredicted RBP22.69■■□□□ 1.22
LINC01558-201ENST00000366822 VSIG10Q8N0Z9 540 aa22.69■■□□□ 1.22
LINC01558-201ENST00000366822 TSPYL6Q8N831 410 aa22.69■■□□□ 1.22
LINC01558-201ENST00000366822 LY75O60449 1722 aa22.68■■□□□ 1.22
LINC01558-201ENST00000366822 LRP5O75197 1615 aa22.68■■□□□ 1.22
LINC01558-201ENST00000366822 SOS1Q07889 1333 aaPredicted RBP22.68■■□□□ 1.22
LINC01558-201ENST00000366822 R3HDM1Q15032 1099 aaKnown RBP22.68■■□□□ 1.22
LINC01558-201ENST00000366822 SLC4A9Q96Q91 983 aa22.68■■□□□ 1.22
LINC01558-201ENST00000366822 RBM42Q9BTD8 480 aaKnown RBP22.68■■□□□ 1.22
LINC01558-201ENST00000366822 LOC102724428A0A0B4J2F2 783 aa22.67■■□□□ 1.22
LINC01558-201ENST00000366822 PLSCR1O15162 318 aa22.67■■□□□ 1.22
LINC01558-201ENST00000366822 HOXB7P09629 217 aa22.67■■□□□ 1.22
LINC01558-201ENST00000366822 SNRPA1P09661 255 aaKnown RBP22.67■■□□□ 1.22
LINC01558-201ENST00000366822 SIK1P57059 783 aa22.67■■□□□ 1.22
LINC01558-201ENST00000366822 TWISTNBQ3B726 338 aaPredicted RBP22.67■■□□□ 1.22
LINC01558-201ENST00000366822 NBPF14Q5TI25 921 aa22.67■■□□□ 1.22
LINC01558-201ENST00000366822 ELL2O00472 640 aaPredicted RBP22.66■■□□□ 1.22
LINC01558-201ENST00000366822 VAMP4O75379 141 aa22.66■■□□□ 1.22
LINC01558-201ENST00000366822 CT47B1P0C2W7 299 aaPredicted RBP22.66■■□□□ 1.22
LINC01558-201ENST00000366822 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
LINC01558-201ENST00000366822 ATP6V1AP38606 617 aa22.64■■□□□ 1.21
LINC01558-201ENST00000366822 TEX13AQ9BXU3 409 aaPredicted RBP22.64■■□□□ 1.21
LINC01558-201ENST00000366822 ZNF831Q5JPB2 1677 aa22.63■■□□□ 1.21
LINC01558-201ENST00000366822 DNAJC10Q8IXB1 793 aa22.63■■□□□ 1.21
LINC01558-201ENST00000366822 CICQ96RK0 1608 aaPredicted RBP22.63■■□□□ 1.21
LINC01558-201ENST00000366822 ITPK1Q13572 414 aa22.62■■□□□ 1.21
LINC01558-201ENST00000366822 CCNL1Q9UK58 526 aaPredicted RBP22.62■■□□□ 1.21
LINC01558-201ENST00000366822 USP16Q9Y5T5 823 aa22.62■■□□□ 1.21
LINC01558-201ENST00000366822 CASZ1Q86V15 1759 aa22.61■■□□□ 1.21
LINC01558-201ENST00000366822 SLC27A3Q5K4L6 730 aa22.61■■□□□ 1.21
LINC01558-201ENST00000366822 ZNF428Q96B54 188 aa22.61■■□□□ 1.21
LINC01558-201ENST00000366822 C5P01031 1676 aa22.61■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms