RNA–Protein interactions for RNA: ENST00000364313.1

RNVU1-3-201, Transcript of RNA, variant U1 small nuclear 3, humanhuman

BASIC

Gene RNVU1-3, Length 161 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNVU1-3-201ENST00000364313 PRKD2Q9BZL6 878 aa5.97□□□□□ -1.45
RNVU1-3-201ENST00000364313 WBP1LQ9NX94 342 aa5.97□□□□□ -1.45
RNVU1-3-201ENST00000364313 BRPF3Q9ULD4 1205 aa5.97□□□□□ -1.45
RNVU1-3-201ENST00000364313 NISCHQ9Y2I1 1504 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 ST18O60284 1047 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 CDK11BP21127 795 aaKnown RBP5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 MPSTP25325 297 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 FOXK2Q01167 660 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 PDE3BQ13370 1112 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 WNT2BQ93097 391 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 OTUD5Q96G74 571 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 MYO19Q96H55 970 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 KCTD15Q96SI1 283 aaPredicted RBP5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 GMLQ99445 158 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 TGIF2Q9GZN2 237 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 SLC6A16Q9GZN6 736 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 NLRP2Q9NX02 1062 aa5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 CDK11AQ9UQ88 783 aaPredicted RBP5.96□□□□□ -1.46
RNVU1-3-201ENST00000364313 FZD6O60353 706 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 INHAP05111 366 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 EHHADHQ08426 723 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 NAA30Q147X3 362 aaPredicted RBP5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 AGERQ15109 404 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 MTFR1Q15390 333 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 CC2D2BQ6DHV5 1058 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 CCDC24Q8N4L8 307 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 SCG3Q8WXD2 468 aaKnown RBP5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 STAC3Q96MF2 364 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 CUEDC1Q9NWM3 386 aaPredicted RBP5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 STIM2Q9P246 746 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 PARP2Q9UGN5 583 aa5.95□□□□□ -1.46
RNVU1-3-201ENST00000364313 FAM205CA6NFA0 338 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 SORBS3O60504 671 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 LDHBP07195 334 aaKnown RBP5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 EIF1AXP47813 144 aaKnown RBP5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 COPS2P61201 443 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 SH3BP2P78314 561 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 FANCCQ00597 558 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 XPCQ01831 940 aaPredicted RBP5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 MPNDQ8N594 471 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 FRMD6Q96NE9 622 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 TINF2Q9BSI4 451 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 C2orf49Q9BVC5 232 aaPredicted RBP5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 OSBPL3Q9H4L5 887 aa5.94□□□□□ -1.46
RNVU1-3-201ENST00000364313 ERVH48-1M5A8F1 160 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 TNFRSF10BO14763 440 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 LGR5O75473 907 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 VARSP26640 1264 aaKnown RBP5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 SCTRP47872 440 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 GDF10P55107 478 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 INTS6LQ5JSJ4 861 aaKnown RBP5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 NT5DC4Q86YG4 428 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 ABTB2Q8N961 1025 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 TMEM87AQ8NBN3 555 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 RNF34Q969K3 372 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 HS3ST6Q96QI5 342 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 SAP130Q9H0E3 1048 aa5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 SCHIP1Q9P0W5 487 aaPredicted RBP5.93□□□□□ -1.46
RNVU1-3-201ENST00000364313 A0A1W2PRU2 124 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 POTEB3A0JP26 581 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 TLL1O43897 1013 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 GNRH1P01148 92 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 HIRAP54198 1017 aaPredicted RBP5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 ENOX2Q16206 610 aaKnown RBP5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 TJAP1Q5JTD0 557 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 COX20Q5RI15 118 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 ALG1LQ6GMV1 187 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 POTEBQ6S5H4 581 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 THSD4Q6ZMP0 1018 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 NOP9Q86U38 636 aaKnown RBP5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 TNS4Q8IZW8 715 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 GJD3Q8N144 294 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 FBF1Q8TES7 1133 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 VTI1AQ96AJ9 217 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 CDK15Q96Q40 435 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 DUSP9Q99956 384 aaKnown RBP5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 TSPAN10Q9H1Z9 355 aaPredicted RBP5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 IL21Q9HBE4 155 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 CCDC87Q9NVE4 849 aa5.92□□□□□ -1.46
RNVU1-3-201ENST00000364313 GPR182O15218 404 aa5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 SMARCA5O60264 1052 aaPredicted RBP5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 USP5P45974 858 aa5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 DHX9Q08211 1270 aaKnown RBP5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 LINC01559Q495D7 138 aa5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 MTRQ99707 1265 aa5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 MRS2Q9HD23 443 aa5.91□□□□□ -1.46
RNVU1-3-201ENST00000364313 WNT7BP56706 349 aa5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 PSMA6P60900 246 aaKnown RBP5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 ATP2B2Q01814 1243 aa5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 RBL2Q08999 1139 aa5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 ESCO1Q5FWF5 840 aa5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 DPH6Q7L8W6 267 aa5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 ETNK1Q9HBU6 452 aa5.9□□□□□ -1.46
RNVU1-3-201ENST00000364313 A6NJY4 79 aa5.89□□□□□ -1.47
RNVU1-3-201ENST00000364313 CDK2AP1O14519 115 aa5.89□□□□□ -1.47
RNVU1-3-201ENST00000364313 PPP1R12BO60237 982 aaPredicted RBP5.89□□□□□ -1.47
RNVU1-3-201ENST00000364313 NCLP19338 710 aaKnown RBP5.89□□□□□ -1.47
RNVU1-3-201ENST00000364313 BRD2P25440 801 aaKnown RBP5.89□□□□□ -1.47
RNVU1-3-201ENST00000364313 MZF1P28698 734 aaPredicted RBP5.89□□□□□ -1.47
RNVU1-3-201ENST00000364313 GNA15P30679 374 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms