RNA–Protein interactions for RNA: ENST00000361901.6

CALD1-202, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 4,114 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-202ENST00000361901 CHMP4AQ9BY43 222 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 IFT172Q9UG01 1749 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 CHD1LQ86WJ1 897 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 JARID2Q92833 1246 aaPredicted RBP11.26□□□□□ -0.61
CALD1-202ENST00000361901 PHAXQ9H814 394 aaKnown RBP11.26□□□□□ -0.61
CALD1-202ENST00000361901 MYO3AQ8NEV4 1616 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 GNAI2P04899 355 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 CHPF2Q9P2E5 772 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 AXIN2Q9Y2T1 843 aa11.26□□□□□ -0.61
CALD1-202ENST00000361901 FER1L4A9Z1Z3 1794 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 VGLL3A8MV65 326 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 SRCIN1Q9C0H9 1055 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 IL1RAPL2Q9NP60 686 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 TPRNQ4KMQ1 711 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 PI4KAP2A4QPH2 592 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 PI4KAP1Q8N8J0 262 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 REREQ9P2R6 1566 aa11.25□□□□□ -0.61
CALD1-202ENST00000361901 DDX58O95786 925 aaKnown RBP11.24□□□□□ -0.61
CALD1-202ENST00000361901 HSP90AB1P08238 724 aaKnown RBP11.24□□□□□ -0.61
CALD1-202ENST00000361901 NOL8Q76FK4 1167 aaKnown RBP11.24□□□□□ -0.61
CALD1-202ENST00000361901 PHF23Q9BUL5 403 aaPredicted RBP11.24□□□□□ -0.61
CALD1-202ENST00000361901 DLC1Q96QB1 1528 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 PNPLA6Q8IY17 1366 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 CCT4P50991 539 aaKnown RBP11.24□□□□□ -0.61
CALD1-202ENST00000361901 GNAI3P08754 354 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 PIK3R4Q99570 1358 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 MAP3K5Q99683 1374 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 FAM177BA6PVY3 158 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 ARHGEF25Q86VW2 580 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 SIL1Q9H173 461 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 ZBTB40Q9NUA8 1239 aa11.24□□□□□ -0.61
CALD1-202ENST00000361901 AKAP4Q5JQC9 854 aa11.23□□□□□ -0.61
CALD1-202ENST00000361901 R3HCC1Q9Y3T6 440 aaKnown RBP11.23□□□□□ -0.61
CALD1-202ENST00000361901 NPHP1O15259 732 aa11.23□□□□□ -0.61
CALD1-202ENST00000361901 TSHZ3Q63HK5 1081 aa11.23□□□□□ -0.61
CALD1-202ENST00000361901 IFNL2Q8IZJ0 200 aa11.23□□□□□ -0.61
CALD1-202ENST00000361901 LRRFIP2Q9Y608 721 aaKnown RBP11.23□□□□□ -0.61
CALD1-202ENST00000361901 KCNJ4P48050 445 aa11.23□□□□□ -0.61
CALD1-202ENST00000361901 IGSF1Q8N6C5 1336 aa11.22□□□□□ -0.61
CALD1-202ENST00000361901 CEP170BQ9Y4F5 1589 aaPredicted RBP11.22□□□□□ -0.61
CALD1-202ENST00000361901 SRGAP3O43295 1099 aa11.22□□□□□ -0.61
CALD1-202ENST00000361901 HSCBQ8IWL3 235 aa11.22□□□□□ -0.61
CALD1-202ENST00000361901 TECPR2O15040 1411 aa11.22□□□□□ -0.61
CALD1-202ENST00000361901 MAP4K4O95819 1239 aaPredicted RBP11.22□□□□□ -0.61
CALD1-202ENST00000361901 GCC1Q96CN9 775 aa11.22□□□□□ -0.61
CALD1-202ENST00000361901 ZBTB7BO15156 539 aaPredicted RBP11.22□□□□□ -0.61
CALD1-202ENST00000361901 C16orf71Q8IYS4 520 aaPredicted RBP11.22□□□□□ -0.61
CALD1-202ENST00000361901 CDK12Q9NYV4 1490 aaPredicted RBP11.22□□□□□ -0.61
CALD1-202ENST00000361901 RNMTO43148 476 aaKnown RBP11.21□□□□□ -0.61
CALD1-202ENST00000361901 KDM2BQ8NHM5 1336 aa11.21□□□□□ -0.61
CALD1-202ENST00000361901 CCDC85AQ96PX6 553 aaPredicted RBP11.21□□□□□ -0.61
CALD1-202ENST00000361901 C22orf23Q9BZE7 217 aa11.21□□□□□ -0.62
CALD1-202ENST00000361901 TAOK2Q9UL54 1235 aa11.21□□□□□ -0.62
CALD1-202ENST00000361901 LRRC7Q96NW7 1537 aa11.21□□□□□ -0.62
CALD1-202ENST00000361901 SEC24BO95487 1268 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 ARHGAP45Q92619 1136 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 BTG4Q9NY30 223 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 ARHGEF10O15013 1369 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 ADGRL3Q9HAR2 1447 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 ATP5J2-PTCD1G3V325 749 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 DNAAF4Q8WXU2 420 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 MAP3K2Q9Y2U5 619 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 MAP2P11137 1827 aaKnown RBP11.2□□□□□ -0.62
CALD1-202ENST00000361901 DBF4Q9UBU7 674 aaPredicted RBP11.2□□□□□ -0.62
CALD1-202ENST00000361901 KIAA0232Q92628 1395 aa11.2□□□□□ -0.62
CALD1-202ENST00000361901 PTCH1Q13635 1447 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 CDC42BPGQ6DT37 1551 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 C3P01024 1663 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 PRAMEF22A3QJZ6 481 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 ZNF853P0CG23 659 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 BRINP3Q76B58 766 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 UBR1Q8IWV7 1749 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 ZCRB1Q8TBF4 217 aaKnown RBP11.19□□□□□ -0.62
CALD1-202ENST00000361901 PTPRCP08575 1304 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.19□□□□□ -0.62
CALD1-202ENST00000361901 NUTM1Q86Y26 1132 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 RPAP2Q8IXW5 612 aaPredicted RBP11.19□□□□□ -0.62
CALD1-202ENST00000361901 DIP2AQ14689 1571 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 MYD88Q99836 296 aa11.19□□□□□ -0.62
CALD1-202ENST00000361901 HTATSF1O43719 755 aaKnown RBP11.18□□□□□ -0.62
CALD1-202ENST00000361901 USP19O94966 1318 aa11.18□□□□□ -0.62
CALD1-202ENST00000361901 G3BP1Q13283 466 aaKnown RBP eCLIP11.18□□□□□ -0.628e-9■□□□□ 9.6
CALD1-202ENST00000361901 CWF19L2Q2TBE0 894 aaKnown RBP11.18□□□□□ -0.62
CALD1-202ENST00000361901 MED14O60244 1454 aa11.18□□□□□ -0.62
CALD1-202ENST00000361901 APPP05067 770 aa11.18□□□□□ -0.62
CALD1-202ENST00000361901 C8orf34Q49A92 452 aa11.18□□□□□ -0.62
CALD1-202ENST00000361901 MEX3CQ5U5Q3 659 aaKnown RBP11.18□□□□□ -0.62
CALD1-202ENST00000361901 DHX37Q8IY37 1157 aaKnown RBP11.18□□□□□ -0.62
CALD1-202ENST00000361901 PANK2Q9BZ23 570 aa11.18□□□□□ -0.62
CALD1-202ENST00000361901 ZBTB3Q9H5J0 574 aa11.18□□□□□ -0.62
CALD1-202ENST00000361901 MRE11P49959 708 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 ANKARQ7Z5J8 1434 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 LMTK3Q96Q04 1460 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 IFIT2P09913 472 aaKnown RBP11.17□□□□□ -0.62
CALD1-202ENST00000361901 HDAC1Q13547 482 aaPredicted RBP11.17□□□□□ -0.62
CALD1-202ENST00000361901 ZNF771Q7L3S4 317 aaPredicted RBP11.17□□□□□ -0.62
CALD1-202ENST00000361901 COPS6Q7L5N1 327 aa11.17□□□□□ -0.62
CALD1-202ENST00000361901 IPO4Q8TEX9 1081 aaKnown RBP11.17□□□□□ -0.62
CALD1-202ENST00000361901 OVOS2A0A0J9YW53 1432 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 179.8 ms