RNA–Protein interactions for RNA: ENST00000361675.6

CALD1-201, Transcript of caldesmon 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALD1, Length 3,612 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-201ENST00000361675 BCAR3O75815 825 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 MCM5P33992 734 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 GYS2P54840 703 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 DMRT2Q9Y5R5 561 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 CFAP74Q9C0B2 1584 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 DRC7Q8IY82 874 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 FAM212AQ96EL1 285 aa10.9□□□□□ -0.66
CALD1-201ENST00000361675 EIF3AQ14152 1382 aaKnown RBP10.9□□□□□ -0.67
CALD1-201ENST00000361675 SART3Q15020 963 aaKnown RBP10.9□□□□□ -0.67
CALD1-201ENST00000361675 FEZ1Q99689 392 aa10.9□□□□□ -0.67
CALD1-201ENST00000361675 KRT222Q8N1A0 295 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 USP25Q9UHP3 1055 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 KDM5AP29375 1690 aaKnown RBP10.89□□□□□ -0.67
CALD1-201ENST00000361675 SATB1Q01826 763 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 E2F4Q16254 413 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.89□□□□□ -0.67
CALD1-201ENST00000361675 PDE6BP35913 854 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 HNRNPH2P55795 449 aaKnown RBP10.89□□□□□ -0.67
CALD1-201ENST00000361675 SKIDA1Q1XH10 827 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 EVI5LQ96CN4 794 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 BCL2L13Q9BXK5 485 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 DEF6Q9H4E7 631 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 PDZRN3Q9UPQ7 1066 aa10.89□□□□□ -0.67
CALD1-201ENST00000361675 TSPOAP1O95153 1857 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 SH3BP5O60239 455 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 HDAC1Q13547 482 aaPredicted RBP10.88□□□□□ -0.67
CALD1-201ENST00000361675 CCDC96Q2M329 555 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 KLHL40Q2TBA0 621 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 FEZ2Q9UHY8 353 aaPredicted RBP10.88□□□□□ -0.67
CALD1-201ENST00000361675 RIMBP3CA6NJZ7 1639 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 RIMBP3BA6NNM3 1639 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 RIMBP3Q9UFD9 1639 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 SMC4Q9NTJ3 1288 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 IFT57Q9NWB7 429 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 TSHZ1Q6ZSZ6 1077 aa10.88□□□□□ -0.67
CALD1-201ENST00000361675 NAA30Q147X3 362 aaPredicted RBP10.87□□□□□ -0.67
CALD1-201ENST00000361675 TERF2Q15554 542 aa10.87□□□□□ -0.67
CALD1-201ENST00000361675 TTLL5Q6EMB2 1281 aa10.87□□□□□ -0.67
CALD1-201ENST00000361675 C16orf45Q96MC5 204 aaPredicted RBP10.87□□□□□ -0.67
CALD1-201ENST00000361675 CABP2Q9NPB3 220 aa10.87□□□□□ -0.67
CALD1-201ENST00000361675 NEXMIFQ5QGS0 1516 aa10.87□□□□□ -0.67
CALD1-201ENST00000361675 MYO5BQ9ULV0 1848 aa10.87□□□□□ -0.67
CALD1-201ENST00000361675 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.87□□□□□ -0.67
CALD1-201ENST00000361675 NOL10Q9BSC4 688 aaKnown RBP10.87□□□□□ -0.67
CALD1-201ENST00000361675 PIK3C2BO00750 1634 aa10.87□□□□□ -0.67
CALD1-201ENST00000361675 BAG4O95429 457 aaKnown RBP10.86□□□□□ -0.67
CALD1-201ENST00000361675 PAX3P23760 479 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 ZNF280DQ6N043 979 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 ST7Q9NRC1 585 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 NEK11Q8NG66 645 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 GTF3C6Q969F1 213 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 APAF1O14727 1248 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 SLFN14P0C7P3 912 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 RAD51AP2Q09MP3 1159 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 GEMIN8Q9NWZ8 242 aaKnown RBP10.86□□□□□ -0.67
CALD1-201ENST00000361675 ZNF521Q96K83 1311 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 MYO3AQ8NEV4 1616 aa10.86□□□□□ -0.67
CALD1-201ENST00000361675 PPME1Q9Y570 386 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 ZMYM4Q5VZL5 1548 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 QRICH2Q9H0J4 1663 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 NSD3Q9BZ95 1437 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 BIRC2Q13490 618 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 ZRSR2Q15696 482 aaKnown RBP10.85□□□□□ -0.67
CALD1-201ENST00000361675 DUSP27Q5VZP5 1158 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 CTDP1Q9Y5B0 961 aaPredicted RBP10.85□□□□□ -0.67
CALD1-201ENST00000361675 NRDCO43847 1150 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 SETBP1Q9Y6X0 1596 aa10.85□□□□□ -0.67
CALD1-201ENST00000361675 ANKRD62A6NC57 917 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 TRIM66O15016 1216 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 SCP2P22307 547 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 TEX35Q5T0J7 233 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 CHAMP1Q96JM3 812 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 ZC3H13Q5T200 1668 aaKnown RBP10.84□□□□□ -0.67
CALD1-201ENST00000361675 CCDC112Q8NEF3 446 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 EFCC1Q9HA90 598 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 GLI2P10070 1586 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 IBSPP21815 317 aaPredicted RBP10.84□□□□□ -0.67
CALD1-201ENST00000361675 CT47A1Q5JQC4 288 aaPredicted RBP10.84□□□□□ -0.67
CALD1-201ENST00000361675 ZCRB1Q8TBF4 217 aaKnown RBP10.84□□□□□ -0.67
CALD1-201ENST00000361675 TULP4Q9NRJ4 1543 aa10.84□□□□□ -0.67
CALD1-201ENST00000361675 CCDC191Q8NCU4 936 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 CEP83Q9Y592 693 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 DNAJC21Q5F1R6 531 aaKnown RBP10.83□□□□□ -0.68
CALD1-201ENST00000361675 TSPY26PQ9H489 355 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 DIP2BQ9P265 1576 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 NPC1L1Q9UHC9 1359 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 SBNO2Q9Y2G9 1366 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 RAB3GAP1Q15042 981 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 KRBA2Q6ZNG9 492 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 FRMD4BQ9Y2L6 1034 aa10.83□□□□□ -0.68
CALD1-201ENST00000361675 RPGRIP1LQ68CZ1 1315 aa10.82□□□□□ -0.68
CALD1-201ENST00000361675 ICE2Q659A1 982 aa10.82□□□□□ -0.68
CALD1-201ENST00000361675 MICAL1Q8TDZ2 1067 aa10.82□□□□□ -0.68
CALD1-201ENST00000361675 PIBF1Q8WXW3 757 aa10.82□□□□□ -0.68
CALD1-201ENST00000361675 VTI1AQ96AJ9 217 aa10.82□□□□□ -0.68
CALD1-201ENST00000361675 RBM42Q9BTD8 480 aaKnown RBP10.82□□□□□ -0.68
CALD1-201ENST00000361675 SF3A1Q15459 793 aaKnown RBP10.82□□□□□ -0.68
CALD1-201ENST00000361675 ARHGAP31Q2M1Z3 1444 aa10.82□□□□□ -0.68
CALD1-201ENST00000361675 RRP7AQ9Y3A4 280 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms