RNA–Protein interactions for RNA: ENST00000361373.8

LDB3-202, Transcript of LIM domain binding 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LDB3, Length 5,297 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-202ENST00000361373 PRAG1Q86YV5 1406 aa15.94■□□□□ 0.14
LDB3-202ENST00000361373 LARP1BQ659C4 914 aaKnown RBP15.94■□□□□ 0.14
LDB3-202ENST00000361373 JAKMIP1Q96N16 626 aaKnown RBP15.94■□□□□ 0.14
LDB3-202ENST00000361373 TRAK2O60296 914 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 SLC5A1P13866 664 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 MAP3K12Q12852 859 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 SLF2Q8IX21 1173 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 ZSCAN29Q8IWY8 852 aaPredicted RBP15.93■□□□□ 0.14
LDB3-202ENST00000361373 IL27Q8NEV9 243 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 C19orf44Q9H6X5 657 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 DACH1Q9UI36 760 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 CFAP45Q9UL16 551 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 ARHGAP45Q92619 1136 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 PTPRKQ15262 1439 aa15.93■□□□□ 0.14
LDB3-202ENST00000361373 ABCF2Q9UG63 623 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 FAM13BQ9NYF5 915 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 MAGEC2Q9UBF1 373 aaPredicted RBP15.92■□□□□ 0.14
LDB3-202ENST00000361373 MAP4K4O95819 1239 aaPredicted RBP15.92■□□□□ 0.14
LDB3-202ENST00000361373 KRT18P05783 430 aaKnown RBP15.92■□□□□ 0.14
LDB3-202ENST00000361373 CT47A1Q5JQC4 288 aaPredicted RBP15.92■□□□□ 0.14
LDB3-202ENST00000361373 NUP133Q8WUM0 1156 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 TBX22Q9Y458 520 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 PPIP5K1Q6PFW1 1433 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 FIBPO43427 364 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 WWC2Q6AWC2 1192 aa15.92■□□□□ 0.14
LDB3-202ENST00000361373 HMGB1P09429 215 aaKnown RBP15.91■□□□□ 0.14
LDB3-202ENST00000361373 STIM1Q13586 685 aa15.91■□□□□ 0.14
LDB3-202ENST00000361373 CDC5LQ99459 802 aaKnown RBP15.91■□□□□ 0.14
LDB3-202ENST00000361373 EIF2AK4Q9P2K8 1649 aaKnown RBP15.91■□□□□ 0.14
LDB3-202ENST00000361373 NUTM1Q86Y26 1132 aa15.91■□□□□ 0.14
LDB3-202ENST00000361373 PRPF40AO75400 957 aaKnown RBP15.91■□□□□ 0.14
LDB3-202ENST00000361373 ASXL1Q8IXJ9 1541 aa15.91■□□□□ 0.14
LDB3-202ENST00000361373 CCDC196A0A1B0GTZ2 297 aa15.9■□□□□ 0.14
LDB3-202ENST00000361373 NASPP49321 788 aaPredicted RBP15.9■□□□□ 0.14
LDB3-202ENST00000361373 PPP1R42Q7Z4L9 355 aa15.9■□□□□ 0.14
LDB3-202ENST00000361373 ZNF592Q92610 1267 aa15.9■□□□□ 0.14
LDB3-202ENST00000361373 CCDC85AQ96PX6 553 aaPredicted RBP15.9■□□□□ 0.14
LDB3-202ENST00000361373 CWC25Q9NXE8 425 aaPredicted RBP15.9■□□□□ 0.14
LDB3-202ENST00000361373 CCDC39Q9UFE4 941 aa15.9■□□□□ 0.14
LDB3-202ENST00000361373 SMARCE1Q969G3 411 aa15.9■□□□□ 0.14
LDB3-202ENST00000361373 TSPY26PQ9H489 355 aa15.89■□□□□ 0.14
LDB3-202ENST00000361373 EIF4G3O43432 1585 aaKnown RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 ZCRB1Q8TBF4 217 aaKnown RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 RPGRQ92834 1020 aaKnown RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 SMARCC1Q92922 1105 aaPredicted RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 ODF2Q5BJF6 829 aa15.89■□□□□ 0.13
LDB3-202ENST00000361373 CAVIN1Q6NZI2 390 aaKnown RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 LRRFIP2Q9Y608 721 aaKnown RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 CCP110O43303 1012 aa15.89■□□□□ 0.13
LDB3-202ENST00000361373 ME1P48163 572 aa15.89■□□□□ 0.13
LDB3-202ENST00000361373 STK3Q13188 491 aa15.89■□□□□ 0.13
LDB3-202ENST00000361373 BMP2KQ9NSY1 1161 aaPredicted RBP15.89■□□□□ 0.13
LDB3-202ENST00000361373 ZMYM3Q14202 1370 aa15.89■□□□□ 0.13
LDB3-202ENST00000361373 TRIM27P14373 513 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 RNF41Q9H4P4 317 aaPredicted RBP15.88■□□□□ 0.13
LDB3-202ENST00000361373 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.88■□□□□ 0.13
LDB3-202ENST00000361373 TRIM5Q9C035 493 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 MBIPQ9NS73 344 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 CCDC192P0DO97 292 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 ANKIB1Q9P2G1 1089 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 TTF1Q15361 905 aaPredicted RBP15.88■□□□□ 0.13
LDB3-202ENST00000361373 TRPM2O94759 1503 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 F6X3S4 739 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 NAP1L1P55209 391 aaKnown RBP15.88■□□□□ 0.13
LDB3-202ENST00000361373 AKAP4Q5JQC9 854 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 AK7Q96M32 723 aa15.88■□□□□ 0.13
LDB3-202ENST00000361373 CCDC173Q0VFZ6 552 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 NAPBQ9H115 298 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 FLT4P35916 1363 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 LDHCP07864 332 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 USP5P45974 858 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 DZIP1Q86YF9 867 aaKnown RBP15.87■□□□□ 0.13
LDB3-202ENST00000361373 SH2B1Q9NRF2 756 aaPredicted RBP15.87■□□□□ 0.13
LDB3-202ENST00000361373 ECHDC1Q9NTX5 307 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 KDM4AO75164 1064 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 CNKSR2Q8WXI2 1034 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 CEP131Q9UPN4 1083 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 MAP3K2Q9Y2U5 619 aa15.87■□□□□ 0.13
LDB3-202ENST00000361373 POLR3AO14802 1390 aaPredicted RBP15.86■□□□□ 0.13
LDB3-202ENST00000361373 ARHGEF12Q9NZN5 1544 aa15.86■□□□□ 0.13
LDB3-202ENST00000361373 HSP90AB2PQ58FF8 381 aa15.86■□□□□ 0.13
LDB3-202ENST00000361373 RSPH6AQ9H0K4 717 aa15.86■□□□□ 0.13
LDB3-202ENST00000361373 BOLA2Q9H3K6 86 aa15.86■□□□□ 0.13
LDB3-202ENST00000361373 EVI5LQ96CN4 794 aa15.86■□□□□ 0.13
LDB3-202ENST00000361373 POLR3DP05423 398 aaPredicted RBP15.85■□□□□ 0.13
LDB3-202ENST00000361373 RDXP35241 583 aaKnown RBP15.85■□□□□ 0.13
LDB3-202ENST00000361373 CHRNA2Q15822 529 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 TMEM132AQ24JP5 1023 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 MNS1Q8NEH6 495 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 ZBTB3Q9H5J0 574 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 ANKRD13DQ6ZTN6 518 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 PDILTQ8N807 584 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 CASTP20810 708 aaKnown RBP15.85■□□□□ 0.13
LDB3-202ENST00000361373 MKNK2Q9HBH9 465 aa15.85■□□□□ 0.13
LDB3-202ENST00000361373 ARGLU1Q9NWB6 273 aaPredicted RBP15.85■□□□□ 0.13
LDB3-202ENST00000361373 UBAP1LF5GYI3 381 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 ALDH1L1O75891 902 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 LDHAL6AQ6ZMR3 332 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 IQCA1Q86XH1 822 aa15.84■□□□□ 0.13
LDB3-202ENST00000361373 TNMDQ9H2S6 317 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms