RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 ZNF530Q6P9A1 599 aaPredicted RBP11.15□□□□□ -0.62
TOP1-201ENST00000361337 FOXD4L3Q6VB84 417 aaPredicted RBP11.15□□□□□ -0.62
TOP1-201ENST00000361337 MRPL50Q8N5N7 158 aaKnown RBP11.15□□□□□ -0.62
TOP1-201ENST00000361337 STK31Q9BXU1 1019 aa11.15□□□□□ -0.62
TOP1-201ENST00000361337 C19orf44Q9H6X5 657 aa11.15□□□□□ -0.62
TOP1-201ENST00000361337 RBM27Q9P2N5 1060 aaKnown RBP11.15□□□□□ -0.62
TOP1-201ENST00000361337 LRRC37A3O60309 1634 aa11.15□□□□□ -0.62
TOP1-201ENST00000361337 DIP2AQ14689 1571 aa11.15□□□□□ -0.62
TOP1-201ENST00000361337 NSD2O96028 1365 aa11.15□□□□□ -0.63
TOP1-201ENST00000361337 PPP1R9BQ96SB3 815 aa11.14□□□□□ -0.63
TOP1-201ENST00000361337 ALDH1L2Q3SY69 923 aa11.14□□□□□ -0.63
TOP1-201ENST00000361337 ZGPATQ8N5A5 531 aaKnown RBP11.14□□□□□ -0.63
TOP1-201ENST00000361337 IGSF3O75054 1194 aa11.14□□□□□ -0.63
TOP1-201ENST00000361337 KLHL40Q2TBA0 621 aa11.14□□□□□ -0.63
TOP1-201ENST00000361337 ZNF771Q7L3S4 317 aaPredicted RBP11.14□□□□□ -0.63
TOP1-201ENST00000361337 CCDC173Q0VFZ6 552 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 RBSNQ9H1K0 784 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 VGLL3A8MV65 326 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 UBAP1LF5GYI3 381 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 CADPS2Q86UW7 1296 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 ZSCAN30Q86W11 494 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 GCC1Q96CN9 775 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 ADAMTS7Q9UKP4 1686 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 NPHP1O15259 732 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 ANXA1P04083 346 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
TOP1-201ENST00000361337 PLEKHM2Q8IWE5 1019 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 MAP3K19Q56UN5 1328 aa11.13□□□□□ -0.63
TOP1-201ENST00000361337 EIF4A2Q14240 407 aaKnown RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 ZSCAN23Q3MJ62 389 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 C8orf58Q8NAV2 365 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 CHMP4BQ9H444 224 aaKnown RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 PTCD1O75127 700 aaKnown RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 CDC45O75419 566 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 PRIM1P49642 420 aaKnown RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 OS9Q13438 667 aaPredicted RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 CHMP4AQ9BY43 222 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 MBIPQ9NS73 344 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 LMBRD1Q9NUN5 540 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 NSFL1CQ9UNZ2 370 aaKnown RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 SLIT1O75093 1534 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 NWD1Q149M9 1564 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 CD163L1Q9NR16 1453 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 TNNT3P45378 269 aaPredicted RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 FKBP5Q13451 457 aaPredicted RBP11.12□□□□□ -0.63
TOP1-201ENST00000361337 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
TOP1-201ENST00000361337 ITSN1Q15811 1721 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 FAM177BA6PVY3 158 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 SMARCA5O60264 1052 aaPredicted RBP11.11□□□□□ -0.63
TOP1-201ENST00000361337 GCP02774 474 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 PIP4K2AP48426 406 aaPredicted RBP11.11□□□□□ -0.63
TOP1-201ENST00000361337 CLEC17AQ6ZS10 378 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 GPT2Q8TD30 523 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 LMOD3Q0VAK6 560 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 ZDHHC9Q9Y397 364 aa11.11□□□□□ -0.63
TOP1-201ENST00000361337 CHD2O14647 1828 aaKnown RBP11.11□□□□□ -0.63
TOP1-201ENST00000361337 PRPF40AO75400 957 aaKnown RBP11.1□□□□□ -0.63
TOP1-201ENST00000361337 CALD1Q05682 793 aaKnown RBP11.1□□□□□ -0.63
TOP1-201ENST00000361337 A2ML1A8K2U0 1454 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 OFD1O75665 1012 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 FCHSD2O94868 740 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 CYP2E1P05181 493 aaPredicted RBP11.1□□□□□ -0.63
TOP1-201ENST00000361337 TPM2P07951 284 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 TWISTNBQ3B726 338 aaPredicted RBP11.1□□□□□ -0.63
TOP1-201ENST00000361337 USP26Q9BXU7 913 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 ABCC4O15439 1325 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 PNPLA6Q8IY17 1366 aa11.1□□□□□ -0.63
TOP1-201ENST00000361337 CBX1P83916 185 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 EYA1Q99502 592 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 TAOK2Q9UL54 1235 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 TECPR2O15040 1411 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 RNF214Q8ND24 703 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 ANKRD24Q8TF21 1146 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 TRERF1Q96PN7 1200 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 PUS7Q96PZ0 661 aaKnown RBP11.09□□□□□ -0.63
TOP1-201ENST00000361337 TMEM94Q12767 1356 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 ARHGAP23Q9P227 1491 aa11.09□□□□□ -0.63
TOP1-201ENST00000361337 PTCH1Q13635 1447 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 PIK3R4Q99570 1358 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 SLC4A2P04920 1241 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 MYL6BP14649 208 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
TOP1-201ENST00000361337 ZNF445P59923 1031 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 GNAI1P63096 354 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 NFE2L2Q16236 605 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 TTC22Q5TAA0 569 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 TTC5Q8N0Z6 440 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.08□□□□□ -0.64
TOP1-201ENST00000361337 FAM135BQ49AJ0 1406 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 SLC39A6Q13433 755 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 TMEM63CQ9P1W3 806 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 ALKQ9UM73 1620 aa11.08□□□□□ -0.64
TOP1-201ENST00000361337 MSH6P52701 1360 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 LMO7Q8WWI1 1683 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 SDSP20132 328 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 RABEP1Q15276 862 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 F6X3S4 739 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 SLAIN2Q9P270 581 aa11.07□□□□□ -0.64
TOP1-201ENST00000361337 SYCE3A1L190 88 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms