RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 TNS1Q9HBL0 1735 aaKnown RBP8.47□□□□□ -1.05
SUDS3-201ENST00000360286 PLSCR1O15162 318 aa8.47□□□□□ -1.05
SUDS3-201ENST00000360286 HTATSF1O43719 755 aaKnown RBP8.47□□□□□ -1.05
SUDS3-201ENST00000360286 BAG6P46379 1132 aa8.47□□□□□ -1.05
SUDS3-201ENST00000360286 SLC52A2Q9HAB3 445 aa8.47□□□□□ -1.05
SUDS3-201ENST00000360286 ATG3Q9NT62 314 aa8.47□□□□□ -1.05
SUDS3-201ENST00000360286 TRIM35Q9UPQ4 493 aa8.47□□□□□ -1.05
SUDS3-201ENST00000360286 SALL2Q9Y467 1007 aaPredicted RBP8.47□□□□□ -1.05
SUDS3-201ENST00000360286 BTAF1O14981 1849 aa8.47□□□□□ -1.05
SUDS3-201ENST00000360286 KCNQ4P56696 695 aa8.46□□□□□ -1.06
SUDS3-201ENST00000360286 TEFQ10587 303 aa8.46□□□□□ -1.06
SUDS3-201ENST00000360286 SLC39A6Q13433 755 aa8.46□□□□□ -1.06
SUDS3-201ENST00000360286 MIS18AQ9NYP9 233 aa8.46□□□□□ -1.06
SUDS3-201ENST00000360286 KCNQ3O43525 872 aa8.45□□□□□ -1.06
SUDS3-201ENST00000360286 KCNA4P22459 653 aa8.45□□□□□ -1.06
SUDS3-201ENST00000360286 TXNRD1Q16881 649 aa8.45□□□□□ -1.06
SUDS3-201ENST00000360286 CEMIPQ8WUJ3 1361 aa8.45□□□□□ -1.06
SUDS3-201ENST00000360286 ADAMTS7Q9UKP4 1686 aa8.44□□□□□ -1.06
SUDS3-201ENST00000360286 BTBD11A6QL63 1104 aa8.44□□□□□ -1.06
SUDS3-201ENST00000360286 TAF7Q15545 349 aaPredicted RBP8.44□□□□□ -1.06
SUDS3-201ENST00000360286 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
SUDS3-201ENST00000360286 SLC4A9Q96Q91 983 aa8.44□□□□□ -1.06
SUDS3-201ENST00000360286 RBM42Q9BTD8 480 aaKnown RBP8.44□□□□□ -1.06
SUDS3-201ENST00000360286 LRRC4BQ9NT99 713 aa8.44□□□□□ -1.06
SUDS3-201ENST00000360286 PTCD1O75127 700 aaKnown RBP8.43□□□□□ -1.06
SUDS3-201ENST00000360286 LMOD3Q0VAK6 560 aa8.43□□□□□ -1.06
SUDS3-201ENST00000360286 LAS1LQ9Y4W2 734 aaKnown RBP8.43□□□□□ -1.06
SUDS3-201ENST00000360286 PALLDQ8WX93 1383 aa8.43□□□□□ -1.06
SUDS3-201ENST00000360286 LOC102724428A0A0B4J2F2 783 aa8.42□□□□□ -1.06
SUDS3-201ENST00000360286 ATP6V1AP38606 617 aa8.42□□□□□ -1.06
SUDS3-201ENST00000360286 SIK1P57059 783 aa8.42□□□□□ -1.06
SUDS3-201ENST00000360286 ZNF790Q6PG37 636 aa8.42□□□□□ -1.06
SUDS3-201ENST00000360286 CCNL1Q9UK58 526 aaPredicted RBP8.42□□□□□ -1.06
SUDS3-201ENST00000360286 MRC1P22897 1456 aa8.42□□□□□ -1.06
SUDS3-201ENST00000360286 SIPA1L3O60292 1781 aaPredicted RBP8.42□□□□□ -1.06
SUDS3-201ENST00000360286 LY75O60449 1722 aa8.41□□□□□ -1.06
SUDS3-201ENST00000360286 ITPK1Q13572 414 aa8.41□□□□□ -1.06
SUDS3-201ENST00000360286 SLC27A3Q5K4L6 730 aa8.41□□□□□ -1.06
SUDS3-201ENST00000360286 WWC1Q8IX03 1113 aa8.41□□□□□ -1.06
SUDS3-201ENST00000360286 TTC5Q8N0Z6 440 aa8.41□□□□□ -1.06
SUDS3-201ENST00000360286 ZNF496Q96IT1 587 aaPredicted RBP8.41□□□□□ -1.06
SUDS3-201ENST00000360286 PRAMEF22A3QJZ6 481 aa8.4□□□□□ -1.06
SUDS3-201ENST00000360286 CCDC27Q2M243 656 aa8.4□□□□□ -1.06
SUDS3-201ENST00000360286 SMIM5Q71RC9 77 aa8.4□□□□□ -1.06
SUDS3-201ENST00000360286 DNAJC10Q8IXB1 793 aa8.4□□□□□ -1.06
SUDS3-201ENST00000360286 LINC00116Q8NCU8 138 aa8.4□□□□□ -1.06
SUDS3-201ENST00000360286 TSPYL4Q9UJ04 414 aa8.4□□□□□ -1.06
SUDS3-201ENST00000360286 CHL1O00533 1208 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 ZNF853P0CG23 659 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 EIF4A1P60842 406 aaKnown RBP8.39□□□□□ -1.07
SUDS3-201ENST00000360286 ZNF827Q17R98 1081 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 NCBP3Q53F19 620 aaKnown RBP8.39□□□□□ -1.07
SUDS3-201ENST00000360286 NBPF14Q5TI25 921 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 AKT1S1Q96B36 256 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 CFAP44Q96MT7 982 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 FMNL2Q96PY5 1086 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 ANO8Q9HCE9 1232 aaPredicted RBP8.39□□□□□ -1.07
SUDS3-201ENST00000360286 RREB1Q92766 1687 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 KCPQ6ZWJ8 1503 aa8.39□□□□□ -1.07
SUDS3-201ENST00000360286 RGPD3A6NKT7 1758 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-201ENST00000360286 RGPD4Q7Z3J3 1758 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 NUP188Q5SRE5 1749 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 PSDA5PKW4 1024 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-201ENST00000360286 R3HDM1Q15032 1099 aaKnown RBP8.38□□□□□ -1.07
SUDS3-201ENST00000360286 SLC15A2Q16348 729 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 KRT24Q2M2I5 525 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 WDR63Q8IWG1 891 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 SPINK5Q9NQ38 1064 aaPredicted RBP8.38□□□□□ -1.07
SUDS3-201ENST00000360286 MBIPQ9NS73 344 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 STK32BQ9NY57 414 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 USP16Q9Y5T5 823 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 PAPPAQ13219 1627 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 TAF1LQ8IZX4 1826 aa8.38□□□□□ -1.07
SUDS3-201ENST00000360286 HEG1Q9ULI3 1381 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 CYP19A1P11511 503 aaPredicted RBP8.37□□□□□ -1.07
SUDS3-201ENST00000360286 GNAI1P63096 354 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 CALD1Q05682 793 aaKnown RBP8.37□□□□□ -1.07
SUDS3-201ENST00000360286 AMIGO3Q86WK7 504 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 VSIG10Q8N0Z9 540 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 TSR2Q969E8 191 aaKnown RBP8.37□□□□□ -1.07
SUDS3-201ENST00000360286 IFT57Q9NWB7 429 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 BABAM1Q9NWV8 329 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 KDM3BQ7LBC6 1761 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 UBR2Q8IWV8 1755 aa8.37□□□□□ -1.07
SUDS3-201ENST00000360286 MYH14Q7Z406 1995 aaKnown RBP8.37□□□□□ -1.07
SUDS3-201ENST00000360286 ZNF521Q96K83 1311 aa8.36□□□□□ -1.07
SUDS3-201ENST00000360286 ELL2O00472 640 aaPredicted RBP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 GIGYF1O75420 1035 aaPredicted RBP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 A1BGP04217 495 aa8.36□□□□□ -1.07
SUDS3-201ENST00000360286 SNRPA1P09661 255 aaKnown RBP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 CRKLP46109 303 aaKnown RBP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 HNRNPUQ00839 825 aaKnown RBP eCLIP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 INTS5Q6P9B9 1019 aaKnown RBP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 NGEFQ8N5V2 710 aa8.36□□□□□ -1.07
SUDS3-201ENST00000360286 CDCA7LQ96GN5 454 aa8.36□□□□□ -1.07
SUDS3-201ENST00000360286 AK7Q96M32 723 aa8.36□□□□□ -1.07
SUDS3-201ENST00000360286 PDGFDQ9GZP0 370 aaPredicted RBP8.36□□□□□ -1.07
SUDS3-201ENST00000360286 TFCP2L1Q9NZI6 479 aa8.36□□□□□ -1.07
SUDS3-201ENST00000360286 IL16Q14005 1332 aa8.35□□□□□ -1.07
SUDS3-201ENST00000360286 TJP1Q07157 1748 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms