RNA–Protein interactions for RNA: ENST00000357710.8

PSEN1-202, Transcript of presenilin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PSEN1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-202ENST00000357710 TXLNBQ8N3L3 684 aa13.6□□□□□ -0.23
PSEN1-202ENST00000357710 CWC15Q9P013 229 aaKnown RBP13.6□□□□□ -0.23
PSEN1-202ENST00000357710 DISP3Q9P2K9 1392 aa13.6□□□□□ -0.23
PSEN1-202ENST00000357710 PTPRMP28827 1452 aa13.6□□□□□ -0.23
PSEN1-202ENST00000357710 TMEM132EQ6IEE7 984 aa13.59□□□□□ -0.23
PSEN1-202ENST00000357710 SMC5Q8IY18 1101 aa13.59□□□□□ -0.23
PSEN1-202ENST00000357710 KIF18AQ8NI77 898 aa13.59□□□□□ -0.23
PSEN1-202ENST00000357710 SETD1BQ9UPS6 1966 aaKnown RBP13.59□□□□□ -0.23
PSEN1-202ENST00000357710 THEMISQ8N1K5 641 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-202ENST00000357710 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
PSEN1-202ENST00000357710 TSC1Q92574 1164 aa13.59□□□□□ -0.23
PSEN1-202ENST00000357710 YTHDC2Q9H6S0 1430 aaKnown RBP13.58□□□□□ -0.24
PSEN1-202ENST00000357710 PLEKHG1Q9ULL1 1385 aa13.58□□□□□ -0.24
PSEN1-202ENST00000357710 ERICH4A6NGS2 130 aa13.58□□□□□ -0.24
PSEN1-202ENST00000357710 CDCA8Q53HL2 280 aa13.58□□□□□ -0.24
PSEN1-202ENST00000357710 ARID4AP29374 1257 aaPredicted RBP13.58□□□□□ -0.24
PSEN1-202ENST00000357710 SUGP1Q8IWZ8 645 aaKnown RBP13.58□□□□□ -0.24
PSEN1-202ENST00000357710 TRAK1Q9UPV9 953 aa13.58□□□□□ -0.24
PSEN1-202ENST00000357710 EID1Q9Y6B2 187 aa13.58□□□□□ -0.24
PSEN1-202ENST00000357710 CCDC196A0A1B0GTZ2 297 aa13.57□□□□□ -0.24
PSEN1-202ENST00000357710 ATP6V1AP38606 617 aa13.57□□□□□ -0.24
PSEN1-202ENST00000357710 MPNDQ8N594 471 aa13.57□□□□□ -0.24
PSEN1-202ENST00000357710 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.57□□□□□ -0.24
PSEN1-202ENST00000357710 TBC1D22AQ8WUA7 517 aa13.57□□□□□ -0.24
PSEN1-202ENST00000357710 TACO1Q9BSH4 297 aaKnown RBP13.57□□□□□ -0.24
PSEN1-202ENST00000357710 DLC1Q96QB1 1528 aa13.56□□□□□ -0.24
PSEN1-202ENST00000357710 PAIP2Q9BPZ3 127 aaKnown RBP13.56□□□□□ -0.24
PSEN1-202ENST00000357710 KNDC1Q76NI1 1749 aa13.56□□□□□ -0.24
PSEN1-202ENST00000357710 RABEP1Q15276 862 aa13.56□□□□□ -0.24
PSEN1-202ENST00000357710 PAXBP1Q9Y5B6 917 aa13.56□□□□□ -0.24
PSEN1-202ENST00000357710 KCNA4P22459 653 aa13.55□□□□□ -0.24
PSEN1-202ENST00000357710 C20orf194Q5TEA3 1177 aa13.55□□□□□ -0.24
PSEN1-202ENST00000357710 SNX21Q969T3 373 aa13.55□□□□□ -0.24
PSEN1-202ENST00000357710 SENP3Q9H4L4 574 aaPredicted RBP13.55□□□□□ -0.24
PSEN1-202ENST00000357710 DIP2AQ14689 1571 aa13.55□□□□□ -0.24
PSEN1-202ENST00000357710 CTAGE5O15320 804 aa13.55□□□□□ -0.24
PSEN1-202ENST00000357710 RBSNQ9H1K0 784 aa13.55□□□□□ -0.24
PSEN1-202ENST00000357710 MYO1CO00159 1063 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 NCBP1Q09161 790 aaKnown RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 MTA1Q13330 715 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 TXNDC2Q86VQ3 553 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 NEFHP12036 1026 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 JARID2Q92833 1246 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 DDX49Q9Y6V7 483 aaKnown RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 MPHOSPH10O00566 681 aaKnown RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 NRDCO43847 1150 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 SEC24BO95487 1268 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 TTC31Q49AM3 519 aaPredicted RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 CALR3Q96L12 384 aaKnown RBP13.54□□□□□ -0.24
PSEN1-202ENST00000357710 POLKQ9UBT6 870 aa13.54□□□□□ -0.24
PSEN1-202ENST00000357710 ADAMTS13Q76LX8 1427 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 SETDB1Q15047 1291 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 NOL10Q9BSC4 688 aaKnown RBP13.53□□□□□ -0.24
PSEN1-202ENST00000357710 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.53□□□□□ -0.24
PSEN1-202ENST00000357710 LTKP29376 864 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 ZSCAN23Q3MJ62 389 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 TEX35Q5T0J7 233 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 ANKRD23Q86SG2 305 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 CEP89Q96ST8 783 aa13.53□□□□□ -0.24
PSEN1-202ENST00000357710 MYOM1P52179 1685 aa13.52□□□□□ -0.24
PSEN1-202ENST00000357710 TPM3P06753 285 aa13.52□□□□□ -0.24
PSEN1-202ENST00000357710 ZNF397Q8NF99 534 aaPredicted RBP13.52□□□□□ -0.24
PSEN1-202ENST00000357710 CPS1P31327 1500 aa13.52□□□□□ -0.25
PSEN1-202ENST00000357710 KIF1BPQ96EK5 621 aa13.52□□□□□ -0.25
PSEN1-202ENST00000357710 MCTP2Q6DN12 878 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 ABCC11Q96J66 1382 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 TECPR2O15040 1411 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 SLFNL1Q499Z3 407 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 TRERF1Q96PN7 1200 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 ATG3Q9NT62 314 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 MED14O60244 1454 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 METP08581 1390 aa13.51□□□□□ -0.25
PSEN1-202ENST00000357710 SRPK2P78362 688 aaKnown RBP13.5□□□□□ -0.25
PSEN1-202ENST00000357710 MKL1Q969V6 931 aa13.5□□□□□ -0.25
PSEN1-202ENST00000357710 LRSAM1Q6UWE0 723 aa13.5□□□□□ -0.25
PSEN1-202ENST00000357710 BORCS6Q96GS4 357 aa13.5□□□□□ -0.25
PSEN1-202ENST00000357710 TULP4Q9NRJ4 1543 aa13.5□□□□□ -0.25
PSEN1-202ENST00000357710 H0YHG0 523 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 SARNPP82979 210 aaKnown RBP13.49□□□□□ -0.25
PSEN1-202ENST00000357710 BIRC2Q13490 618 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 ANKRD20A12PQ8NF67 263 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 DRC1Q96MC2 740 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 TMX1Q9H3N1 280 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 ZBTB12Q9Y330 459 aaPredicted RBP13.49□□□□□ -0.25
PSEN1-202ENST00000357710 MAP2K2P36507 400 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.49□□□□□ -0.25
PSEN1-202ENST00000357710 TOMM22Q9NS69 142 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 PLEKHH1Q9ULM0 1364 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 PLIN1O60240 522 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 IPO7O95373 1038 aaKnown RBP13.49□□□□□ -0.25
PSEN1-202ENST00000357710 DNAJC21Q5F1R6 531 aaKnown RBP13.49□□□□□ -0.25
PSEN1-202ENST00000357710 ZNF513Q8N8E2 541 aaPredicted RBP13.49□□□□□ -0.25
PSEN1-202ENST00000357710 ZNF446Q9NWS9 450 aa13.49□□□□□ -0.25
PSEN1-202ENST00000357710 EVC2Q86UK5 1308 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 CCDC96Q2M329 555 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 TSGA10IPQ3SY00 556 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 ZC3H12AQ5D1E8 599 aaKnown RBP13.48□□□□□ -0.25
PSEN1-202ENST00000357710 C10orf67Q8IYJ2 551 aa13.48□□□□□ -0.25
PSEN1-202ENST00000357710 PRAM1Q96QH2 718 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms