RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 RBSNQ9H1K0 784 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 ACEP12821 1306 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
CAPN3-205ENST00000357568 NGDNQ8NEJ9 315 aaKnown RBP13.06□□□□□ -0.32
CAPN3-205ENST00000357568 R3HCC1Q9Y3T6 440 aaKnown RBP13.06□□□□□ -0.32
CAPN3-205ENST00000357568 UQCRHLA0A096LP55 91 aa13.05□□□□□ -0.32
CAPN3-205ENST00000357568 FCHSD2O94868 740 aa13.05□□□□□ -0.32
CAPN3-205ENST00000357568 UQCRHP07919 91 aa13.05□□□□□ -0.32
CAPN3-205ENST00000357568 PSME1Q06323 249 aa13.05□□□□□ -0.32
CAPN3-205ENST00000357568 MCTP1Q6DN14 999 aa13.05□□□□□ -0.32
CAPN3-205ENST00000357568 MRPL50Q8N5N7 158 aaKnown RBP13.05□□□□□ -0.32
CAPN3-205ENST00000357568 SOS2Q07890 1332 aaPredicted RBP13.05□□□□□ -0.32
CAPN3-205ENST00000357568 USP6P35125 1406 aa13.05□□□□□ -0.32
CAPN3-205ENST00000357568 CAVIN1Q6NZI2 390 aaKnown RBP13.05□□□□□ -0.32
CAPN3-205ENST00000357568 COL16A1Q07092 1604 aaPredicted RBP13.04□□□□□ -0.32
CAPN3-205ENST00000357568 ST18O60284 1047 aa13.04□□□□□ -0.32
CAPN3-205ENST00000357568 INTS3Q68E01 1043 aaKnown RBP13.04□□□□□ -0.32
CAPN3-205ENST00000357568 USP26Q9BXU7 913 aa13.04□□□□□ -0.32
CAPN3-205ENST00000357568 A0A1W2PP64 1363 aa13.04□□□□□ -0.32
CAPN3-205ENST00000357568 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
CAPN3-205ENST00000357568 PIP4K2BP78356 416 aa13.04□□□□□ -0.32
CAPN3-205ENST00000357568 UTP14CQ5TAP6 766 aaKnown RBP13.04□□□□□ -0.32
CAPN3-205ENST00000357568 EDC4Q6P2E9 1401 aaKnown RBP13.03□□□□□ -0.32
CAPN3-205ENST00000357568 TTC22Q5TAA0 569 aa13.03□□□□□ -0.32
CAPN3-205ENST00000357568 API5Q9BZZ5 524 aaKnown RBP13.03□□□□□ -0.32
CAPN3-205ENST00000357568 USP54Q70EL1 1684 aa13.03□□□□□ -0.32
CAPN3-205ENST00000357568 ALS2Q96Q42 1657 aa13.03□□□□□ -0.32
CAPN3-205ENST00000357568 KIF20BQ96Q89 1820 aa13.03□□□□□ -0.32
CAPN3-205ENST00000357568 KRT28Q7Z3Y7 464 aa13.03□□□□□ -0.32
CAPN3-205ENST00000357568 RBM42Q9BTD8 480 aaKnown RBP13.03□□□□□ -0.32
CAPN3-205ENST00000357568 DIAPH1O60610 1272 aaKnown RBP13.02□□□□□ -0.32
CAPN3-205ENST00000357568 PRIM1P49642 420 aaKnown RBP13.02□□□□□ -0.32
CAPN3-205ENST00000357568 CASC1Q6TDU7 716 aa13.02□□□□□ -0.32
CAPN3-205ENST00000357568 DCTPP1Q9H773 170 aa13.02□□□□□ -0.32
CAPN3-205ENST00000357568 MCM2P49736 904 aa13.02□□□□□ -0.33
CAPN3-205ENST00000357568 PLEKHM2Q8IWE5 1019 aa13.02□□□□□ -0.33
CAPN3-205ENST00000357568 SIRT2Q8IXJ6 389 aa13.02□□□□□ -0.33
CAPN3-205ENST00000357568 IFT57Q9NWB7 429 aa13.02□□□□□ -0.33
CAPN3-205ENST00000357568 TTC21AQ8NDW8 1320 aa13.02□□□□□ -0.33
CAPN3-205ENST00000357568 U2SURPO15042 1029 aaKnown RBP13.01□□□□□ -0.33
CAPN3-205ENST00000357568 FOXO3O43524 673 aa13.01□□□□□ -0.33
CAPN3-205ENST00000357568 VAMP4O75379 141 aa13.01□□□□□ -0.33
CAPN3-205ENST00000357568 GSPT1P15170 499 aaKnown RBP13.01□□□□□ -0.33
CAPN3-205ENST00000357568 PRIMPOLQ96LW4 560 aa13.01□□□□□ -0.33
CAPN3-205ENST00000357568 GPT2Q8TD30 523 aa13.01□□□□□ -0.33
CAPN3-205ENST00000357568 TNS3Q68CZ2 1445 aa13.01□□□□□ -0.33
CAPN3-205ENST00000357568 COL22A1Q8NFW1 1626 aaPredicted RBP13□□□□□ -0.33
CAPN3-205ENST00000357568 UVSSAQ2YD98 709 aa13□□□□□ -0.33
CAPN3-205ENST00000357568 SYAP1Q96A49 352 aaPredicted RBP13□□□□□ -0.33
CAPN3-205ENST00000357568 FAM13BQ9NYF5 915 aa13□□□□□ -0.33
CAPN3-205ENST00000357568 REC8O95072 547 aa13□□□□□ -0.33
CAPN3-205ENST00000357568 GTF2F1P35269 517 aaKnown RBP eCLIP13□□□□□ -0.33
CAPN3-205ENST00000357568 GNAI1P63096 354 aa13□□□□□ -0.33
CAPN3-205ENST00000357568 HMGN5P82970 282 aaKnown RBP13□□□□□ -0.33
CAPN3-205ENST00000357568 ZNF853P0CG23 659 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 FAM184AQ8NB25 1140 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 CCDC94Q9BW85 323 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-205ENST00000357568 MED1Q15648 1581 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-205ENST00000357568 ARHGEF10O15013 1369 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 SPATA31A3Q5VYP0 1347 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 TTC21BQ7Z4L5 1316 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 PHF14O94880 888 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
CAPN3-205ENST00000357568 KIAA2012Q0VF49 1180 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 MYRIPQ8NFW9 859 aa12.99□□□□□ -0.33
CAPN3-205ENST00000357568 LRRC59Q96AG4 307 aaKnown RBP12.99□□□□□ -0.33
CAPN3-205ENST00000357568 IL17RAQ96F46 866 aa12.98□□□□□ -0.33
CAPN3-205ENST00000357568 NFE2L2Q16236 605 aa12.98□□□□□ -0.33
CAPN3-205ENST00000357568 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
CAPN3-205ENST00000357568 USP31Q70CQ4 1352 aa12.98□□□□□ -0.33
CAPN3-205ENST00000357568 PRPF40AO75400 957 aaKnown RBP12.97□□□□□ -0.33
CAPN3-205ENST00000357568 NCLP19338 710 aaKnown RBP12.97□□□□□ -0.33
CAPN3-205ENST00000357568 RPAP2Q8IXW5 612 aaPredicted RBP12.97□□□□□ -0.33
CAPN3-205ENST00000357568 ZDHHC9Q9Y397 364 aa12.97□□□□□ -0.33
CAPN3-205ENST00000357568 LMOD3Q0VAK6 560 aa12.97□□□□□ -0.33
CAPN3-205ENST00000357568 INTS4Q96HW7 963 aaKnown RBP12.97□□□□□ -0.33
CAPN3-205ENST00000357568 TMEM63CQ9P1W3 806 aa12.97□□□□□ -0.33
CAPN3-205ENST00000357568 FYB1O15117 783 aa12.96□□□□□ -0.33
CAPN3-205ENST00000357568 ANKRD44Q8N8A2 993 aa12.96□□□□□ -0.33
CAPN3-205ENST00000357568 DDX17Q92841 729 aaKnown RBP12.96□□□□□ -0.33
CAPN3-205ENST00000357568 CRYBG1Q9Y4K1 1723 aa12.96□□□□□ -0.33
CAPN3-205ENST00000357568 ATP10DQ9P241 1426 aa12.96□□□□□ -0.33
CAPN3-205ENST00000357568 CUL4AQ13619 759 aa12.96□□□□□ -0.33
CAPN3-205ENST00000357568 TSPY26PQ9H489 355 aa12.96□□□□□ -0.33
CAPN3-205ENST00000357568 EPB41L2O43491 1005 aaKnown RBP12.96□□□□□ -0.34
CAPN3-205ENST00000357568 BRD1O95696 1058 aa12.96□□□□□ -0.34
CAPN3-205ENST00000357568 JCADQ9P266 1359 aa12.95□□□□□ -0.34
CAPN3-205ENST00000357568 MARF1Q9Y4F3 1742 aaKnown RBP12.95□□□□□ -0.34
CAPN3-205ENST00000357568 HSPA1LP34931 641 aa12.95□□□□□ -0.34
CAPN3-205ENST00000357568 DMTNQ08495 405 aa12.95□□□□□ -0.34
CAPN3-205ENST00000357568 OSBPL3Q9H4L5 887 aa12.95□□□□□ -0.34
CAPN3-205ENST00000357568 AK9Q5TCS8 1911 aa12.94□□□□□ -0.34
CAPN3-205ENST00000357568 ABCA3Q99758 1704 aa12.94□□□□□ -0.34
CAPN3-205ENST00000357568 ANAPC15P60006 121 aa12.94□□□□□ -0.34
CAPN3-205ENST00000357568 PIAS4Q8N2W9 510 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-205ENST00000357568 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
CAPN3-205ENST00000357568 SLIT3O75094 1523 aa12.94□□□□□ -0.34
CAPN3-205ENST00000357568 CDK12Q9NYV4 1490 aaPredicted RBP12.94□□□□□ -0.34
CAPN3-205ENST00000357568 ERC2O15083 957 aa12.94□□□□□ -0.34
CAPN3-205ENST00000357568 GTPBP4Q9BZE4 634 aaKnown RBP12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms