RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 MCM5P33992 734 aa9.98□□□□□ -0.81
CDC42SE1-201ENST00000357235 LRSAM1Q6UWE0 723 aa9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 G2E3Q7L622 706 aa9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 PIK3R4Q99570 1358 aa9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 NEXMIFQ5QGS0 1516 aa9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 MAP4K4O95819 1239 aaPredicted RBP9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 PDE1AP54750 535 aa9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 PALD1Q9ULE6 856 aa9.97□□□□□ -0.81
CDC42SE1-201ENST00000357235 NUDT16Q96DE0 195 aaKnown RBP9.96□□□□□ -0.81
CDC42SE1-201ENST00000357235 IBTKQ9P2D0 1353 aaPredicted RBP9.96□□□□□ -0.81
CDC42SE1-201ENST00000357235 PTPRMP28827 1452 aa9.96□□□□□ -0.81
CDC42SE1-201ENST00000357235 NEO1Q92859 1461 aa9.96□□□□□ -0.81
CDC42SE1-201ENST00000357235 FOXO3O43524 673 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 MCCP23508 829 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 TSPYL4Q9UJ04 414 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 RTL1A6NKG5 1358 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 HSP90AB2PQ58FF8 381 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 MYRIPQ8NFW9 859 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 RTF1Q92541 710 aaKnown RBP9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 IL1RAPL2Q9NP60 686 aa9.96□□□□□ -0.82
CDC42SE1-201ENST00000357235 HAP1P54257 671 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 MAPK8IP2Q13387 824 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 FKBP5Q13451 457 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 ATP2B3Q16720 1220 aa9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 ZNF771Q7L3S4 317 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 TEX2Q8IWB9 1127 aa9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 WASLO00401 505 aaPredicted RBP9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 EIF4A2Q14240 407 aaKnown RBP9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 FRMPD1Q5SYB0 1578 aa9.95□□□□□ -0.82
CDC42SE1-201ENST00000357235 IGSF3O75054 1194 aa9.94□□□□□ -0.82
CDC42SE1-201ENST00000357235 GADD45BO75293 160 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-201ENST00000357235 MBD3O95983 291 aa9.94□□□□□ -0.82
CDC42SE1-201ENST00000357235 IRX3P78415 501 aaPredicted RBP9.94□□□□□ -0.82
CDC42SE1-201ENST00000357235 TSPY26PQ9H489 355 aa9.94□□□□□ -0.82
CDC42SE1-201ENST00000357235 CCDC39Q9UFE4 941 aa9.94□□□□□ -0.82
CDC42SE1-201ENST00000357235 MX1P20591 662 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 PDLIM2Q96JY6 352 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 STK31Q9BXU1 1019 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 LRRCC1Q9C099 1032 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 CCDC61Q9Y6R9 512 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 ATP10DQ9P241 1426 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 SPDYE4A6NLX3 237 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 GNAI2P04899 355 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 TSC1Q92574 1164 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 JARID2Q92833 1246 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 SYAP1Q96A49 352 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 ESYT1Q9BSJ8 1104 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 USP25Q9UHP3 1055 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 PNMA6EA0A0J9YXQ4 647 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 CHL1O00533 1208 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 HMGN5P82970 282 aaKnown RBP9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 ZNF710Q8N1W2 664 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 C17orf53Q8N3J3 647 aaPredicted RBP9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 CHMP4AQ9BY43 222 aa9.93□□□□□ -0.82
CDC42SE1-201ENST00000357235 MLH3Q9UHC1 1453 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 KCNJ4P48050 445 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 IRX5P78411 483 aaPredicted RBP9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 NUTM1Q86Y26 1132 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 UNC5CLQ8IV45 518 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 PRIMPOLQ96LW4 560 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 FAM177BA6PVY3 158 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 USP48Q86UV5 1035 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 DNAJC2Q99543 621 aaKnown RBP9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 PTPRCP08575 1304 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 SIGLEC1Q9BZZ2 1709 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 HECW2Q9P2P5 1572 aa9.92□□□□□ -0.82
CDC42SE1-201ENST00000357235 YEATS2Q9ULM3 1422 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 FIBPO43427 364 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 BRD1O95696 1058 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 SECISBP2LQ93073 1101 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 TTC12Q9H892 705 aaPredicted RBP9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 CHMP3Q9Y3E7 222 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.91□□□□□ -0.827e-17■■■□□ 16.2
CDC42SE1-201ENST00000357235 ARHGEF40Q8TER5 1519 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 BRD2P25440 801 aaKnown RBP9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 KIAA2012Q0VF49 1180 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 PLPPR3Q6T4P5 718 aa9.91□□□□□ -0.82
CDC42SE1-201ENST00000357235 HCLS1P14317 486 aaPredicted RBP9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 CHMLP26374 656 aa9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 PDCL2Q8N4E4 241 aa9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 KIF3AQ9Y496 699 aa9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 PIK3C2BO00750 1634 aa9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 MCM2P49736 904 aa9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 CCT4P50991 539 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 DDX54Q8TDD1 881 aaKnown RBP9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 CNPY2Q9Y2B0 182 aa9.9□□□□□ -0.82
CDC42SE1-201ENST00000357235 CHRM1P11229 460 aaPredicted RBP9.9□□□□□ -0.83
CDC42SE1-201ENST00000357235 LTV1Q96GA3 475 aaPredicted RBP9.9□□□□□ -0.83
CDC42SE1-201ENST00000357235 MAP2P11137 1827 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 PHF14O94880 888 aa9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 CPA1P15085 419 aa9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 SLC20A2Q08357 652 aa9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 MTHFSDQ2M296 383 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 IL25Q9H293 177 aa9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 EDC4Q6P2E9 1401 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 SURF6O75683 361 aaKnown RBP9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 FLIIQ13045 1269 aa9.89□□□□□ -0.83
CDC42SE1-201ENST00000357235 KNDC1Q76NI1 1749 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms