RNA–Protein interactions for RNA: ENST00000356654.8

ATN1-201, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,351 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-201ENST00000356654 ARHGEF5Q12774 1597 aa16.79■□□□□ 0.28
ATN1-201ENST00000356654 PIP4K2AP48426 406 aaPredicted RBP16.79■□□□□ 0.28
ATN1-201ENST00000356654 ATP2B1P20020 1258 aa16.79■□□□□ 0.28
ATN1-201ENST00000356654 BLOC1S2Q6QNY1 142 aa16.79■□□□□ 0.28
ATN1-201ENST00000356654 SAMD9LQ8IVG5 1584 aa16.79■□□□□ 0.28
ATN1-201ENST00000356654 HDAC1Q13547 482 aaPredicted RBP16.79■□□□□ 0.28
ATN1-201ENST00000356654 GPTP24298 496 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 TBC1D9Q6ZT07 1266 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 UBE3BQ7Z3V4 1068 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 IL13P35225 146 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 CEBPZQ03701 1054 aaKnown RBP16.78■□□□□ 0.28
ATN1-201ENST00000356654 TBC1D2Q9BYX2 928 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 EXOC5O00471 708 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 PES1O00541 588 aaKnown RBP16.78■□□□□ 0.28
ATN1-201ENST00000356654 GCC2Q8IWJ2 1684 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 ERCC6L2Q5T890 1561 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 NPHP3Q7Z494 1330 aa16.78■□□□□ 0.28
ATN1-201ENST00000356654 SAFBQ15424 915 aaKnown RBP eCLIP16.77■□□□□ 0.27
ATN1-201ENST00000356654 BMP2KLQ5H9B9 411 aa16.77■□□□□ 0.27
ATN1-201ENST00000356654 CCDC73Q6ZRK6 1079 aa16.77■□□□□ 0.27
ATN1-201ENST00000356654 TRIM35Q9UPQ4 493 aa16.77■□□□□ 0.27
ATN1-201ENST00000356654 HOXC9P31274 260 aa16.77■□□□□ 0.27
ATN1-201ENST00000356654 PDCP20941 246 aa16.76■□□□□ 0.27
ATN1-201ENST00000356654 MCM4P33991 863 aa16.76■□□□□ 0.27
ATN1-201ENST00000356654 C16orf71Q8IYS4 520 aaPredicted RBP16.76■□□□□ 0.27
ATN1-201ENST00000356654 IDH1O75874 414 aaKnown RBP16.76■□□□□ 0.27
ATN1-201ENST00000356654 METTL24Q5JXM2 366 aa16.76■□□□□ 0.27
ATN1-201ENST00000356654 CWC22Q9HCG8 908 aaKnown RBP16.76■□□□□ 0.27
ATN1-201ENST00000356654 NEO1Q92859 1461 aa16.76■□□□□ 0.27
ATN1-201ENST00000356654 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.76■□□□□ 0.278e-7■■■□□ 14.7
ATN1-201ENST00000356654 NUCB1Q02818 461 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 COPS6Q7L5N1 327 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 PRPF40BQ6NWY9 871 aaKnown RBP16.75■□□□□ 0.27
ATN1-201ENST00000356654 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 PDRG1Q9NUG6 133 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 MSH6P52701 1360 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 PIK3R4Q99570 1358 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 SNRPA1P09661 255 aaKnown RBP16.75■□□□□ 0.27
ATN1-201ENST00000356654 TTC37Q6PGP7 1564 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 ANKRD13DQ6ZTN6 518 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 KLHL34Q8N239 644 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 SDF4Q9BRK5 362 aa16.75■□□□□ 0.27
ATN1-201ENST00000356654 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
ATN1-201ENST00000356654 TPD52L1Q16890 204 aaPredicted RBP16.74■□□□□ 0.27
ATN1-201ENST00000356654 AKAP4Q5JQC9 854 aa16.74■□□□□ 0.27
ATN1-201ENST00000356654 ANKRD44Q8N8A2 993 aa16.74■□□□□ 0.27
ATN1-201ENST00000356654 NFATC2IPQ8NCF5 419 aa16.74■□□□□ 0.27
ATN1-201ENST00000356654 XAGE3Q8WTP9 111 aa16.74■□□□□ 0.27
ATN1-201ENST00000356654 NGLY1Q96IV0 654 aa16.74■□□□□ 0.27
ATN1-201ENST00000356654 SASS6Q6UVJ0 657 aa16.74■□□□□ 0.27
ATN1-201ENST00000356654 LARP1BQ659C4 914 aaKnown RBP16.74■□□□□ 0.27
ATN1-201ENST00000356654 SAMD1Q6SPF0 538 aaPredicted RBP16.74■□□□□ 0.27
ATN1-201ENST00000356654 LARP6Q9BRS8 491 aaKnown RBP16.74■□□□□ 0.27
ATN1-201ENST00000356654 KAT6BQ8WYB5 2073 aa16.73■□□□□ 0.27
ATN1-201ENST00000356654 ZBTB40Q9NUA8 1239 aa16.73■□□□□ 0.27
ATN1-201ENST00000356654 TRMT112Q9UI30 125 aaKnown RBP16.73■□□□□ 0.27
ATN1-201ENST00000356654 UGGT1Q9NYU2 1555 aa16.73■□□□□ 0.27
ATN1-201ENST00000356654 MRE11P49959 708 aa16.73■□□□□ 0.27
ATN1-201ENST00000356654 SART3Q15020 963 aaKnown RBP16.73■□□□□ 0.27
ATN1-201ENST00000356654 GNL3LQ9NVN8 582 aaKnown RBP16.73■□□□□ 0.27
ATN1-201ENST00000356654 NASPP49321 788 aaPredicted RBP16.73■□□□□ 0.27
ATN1-201ENST00000356654 ZCRB1Q8TBF4 217 aaKnown RBP16.73■□□□□ 0.27
ATN1-201ENST00000356654 PLA2R1Q13018 1463 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 IP6K1Q92551 441 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 ABCF2Q9UG63 623 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 TMEM2Q9UHN6 1383 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 MBD3O95983 291 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 G2E3Q7L622 706 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 ECHDC1Q9NTX5 307 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 IFIT5Q13325 482 aaKnown RBP16.72■□□□□ 0.27
ATN1-201ENST00000356654 BRPF3Q9ULD4 1205 aa16.72■□□□□ 0.27
ATN1-201ENST00000356654 MAGI2Q86UL8 1455 aa16.71■□□□□ 0.27
ATN1-201ENST00000356654 IFIT1P09914 478 aaKnown RBP16.71■□□□□ 0.27
ATN1-201ENST00000356654 RHPN1Q8TCX5 695 aa16.71■□□□□ 0.27
ATN1-201ENST00000356654 TTC22Q5TAA0 569 aa16.71■□□□□ 0.27
ATN1-201ENST00000356654 ZFYVE9O95405 1425 aa16.71■□□□□ 0.27
ATN1-201ENST00000356654 WDR33Q9C0J8 1336 aaKnown RBP16.71■□□□□ 0.27
ATN1-201ENST00000356654 SDSP20132 328 aa16.71■□□□□ 0.27
ATN1-201ENST00000356654 TBC1D32Q96NH3 1257 aa16.71■□□□□ 0.27
ATN1-201ENST00000356654 PHAXQ9H814 394 aaKnown RBP16.71■□□□□ 0.27
ATN1-201ENST00000356654 ANKRD1Q15327 319 aa16.7■□□□□ 0.26
ATN1-201ENST00000356654 CIZ1Q9ULV3 898 aaPredicted RBP16.7■□□□□ 0.26
ATN1-201ENST00000356654 IGHMBP2P38935 993 aaKnown RBP16.7■□□□□ 0.26
ATN1-201ENST00000356654 SNRKQ9NRH2 765 aa16.7■□□□□ 0.26
ATN1-201ENST00000356654 LRP2BPQ9P2M1 347 aa16.7■□□□□ 0.26
ATN1-201ENST00000356654 MYO5CQ9NQX4 1742 aa16.7■□□□□ 0.26
ATN1-201ENST00000356654 EDC4Q6P2E9 1401 aaKnown RBP16.7■□□□□ 0.26
ATN1-201ENST00000356654 FERMT3Q86UX7 667 aa16.7■□□□□ 0.26
ATN1-201ENST00000356654 C8orf34Q49A92 452 aa16.69■□□□□ 0.26
ATN1-201ENST00000356654 DDX11Q96FC9 970 aa16.69■□□□□ 0.26
ATN1-201ENST00000356654 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
ATN1-201ENST00000356654 NACAP1Q9BZK3 213 aa16.69■□□□□ 0.26
ATN1-201ENST00000356654 RAI14Q9P0K7 980 aa16.69■□□□□ 0.26
ATN1-201ENST00000356654 CCDC83Q8IWF9 413 aa16.68■□□□□ 0.26
ATN1-201ENST00000356654 ADGBQ8N7X0 1667 aa16.68■□□□□ 0.26
ATN1-201ENST00000356654 PLEKHG3A1L390 1219 aa16.68■□□□□ 0.26
ATN1-201ENST00000356654 PDE1AP54750 535 aa16.68■□□□□ 0.26
ATN1-201ENST00000356654 CWF19L2Q2TBE0 894 aaKnown RBP16.68■□□□□ 0.26
ATN1-201ENST00000356654 KSR2Q6VAB6 950 aa16.68■□□□□ 0.26
ATN1-201ENST00000356654 ATP8B2P98198 1209 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms