RNA–Protein interactions for RNA: ENST00000356396.8

LSS-201, Transcript of lanosterol synthase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSS, Length 2,995 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSS-201ENST00000356396 STK31Q9BXU1 1019 aa17.51■□□□□ 0.39
LSS-201ENST00000356396 MFAP1P55081 439 aaKnown RBP17.51■□□□□ 0.39
LSS-201ENST00000356396 EVA1CP58658 441 aa17.51■□□□□ 0.39
LSS-201ENST00000356396 SYTL4Q96C24 671 aaPredicted RBP17.51■□□□□ 0.39
LSS-201ENST00000356396 SPATA31A3Q5VYP0 1347 aa17.5■□□□□ 0.39
LSS-201ENST00000356396 RNMTO43148 476 aaKnown RBP17.5■□□□□ 0.39
LSS-201ENST00000356396 PLEKHO1Q53GL0 409 aaPredicted RBP17.5■□□□□ 0.39
LSS-201ENST00000356396 CWF19L2Q2TBE0 894 aaKnown RBP17.49■□□□□ 0.39
LSS-201ENST00000356396 NFAT5O94916 1531 aa17.49■□□□□ 0.39
LSS-201ENST00000356396 PI4KAP2A4QPH2 592 aa17.49■□□□□ 0.39
LSS-201ENST00000356396 PI4KAP1Q8N8J0 262 aa17.49■□□□□ 0.39
LSS-201ENST00000356396 BTG4Q9NY30 223 aa17.49■□□□□ 0.39
LSS-201ENST00000356396 MED1Q15648 1581 aaPredicted RBP17.48■□□□□ 0.39
LSS-201ENST00000356396 FAM182BQ5T319 152 aa17.48■□□□□ 0.39
LSS-201ENST00000356396 USP16Q9Y5T5 823 aa17.48■□□□□ 0.39
LSS-201ENST00000356396 PNMA6EA0A0J9YXQ4 647 aa17.47■□□□□ 0.39
LSS-201ENST00000356396 EIF4A1P60842 406 aaKnown RBP17.47■□□□□ 0.39
LSS-201ENST00000356396 FAM161AQ3B820 660 aa17.47■□□□□ 0.39
LSS-201ENST00000356396 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
LSS-201ENST00000356396 NBPF7P0C2Y1 421 aaPredicted RBP17.46■□□□□ 0.39
LSS-201ENST00000356396 ZNF496Q96IT1 587 aaPredicted RBP17.46■□□□□ 0.39
LSS-201ENST00000356396 IL1RAPL2Q9NP60 686 aa17.46■□□□□ 0.39
LSS-201ENST00000356396 MEGF6O75095 1541 aa17.45■□□□□ 0.38
LSS-201ENST00000356396 MAP4K4O95819 1239 aaPredicted RBP17.45■□□□□ 0.38
LSS-201ENST00000356396 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
LSS-201ENST00000356396 ABCC4O15439 1325 aa17.45■□□□□ 0.38
LSS-201ENST00000356396 TATP17735 454 aaPredicted RBP17.45■□□□□ 0.38
LSS-201ENST00000356396 KCNQ4P56696 695 aa17.45■□□□□ 0.38
LSS-201ENST00000356396 STRCQ7RTU9 1775 aa17.45■□□□□ 0.38
LSS-201ENST00000356396 AKAP4Q5JQC9 854 aa17.44■□□□□ 0.38
LSS-201ENST00000356396 SMIM5Q71RC9 77 aa17.44■□□□□ 0.38
LSS-201ENST00000356396 ZBTB47Q9UFB7 747 aaPredicted RBP17.44■□□□□ 0.38
LSS-201ENST00000356396 CT47B1P0C2W7 299 aaPredicted RBP17.43■□□□□ 0.38
LSS-201ENST00000356396 KLHDC4Q8TBB5 520 aa17.43■□□□□ 0.38
LSS-201ENST00000356396 API5Q9BZZ5 524 aaKnown RBP17.43■□□□□ 0.38
LSS-201ENST00000356396 RGPD1P0DJD0 1748 aa17.43■□□□□ 0.38
LSS-201ENST00000356396 ATP5J2-PTCD1G3V325 749 aa17.43■□□□□ 0.38
LSS-201ENST00000356396 NOP58Q9Y2X3 529 aaKnown RBP17.43■□□□□ 0.38
LSS-201ENST00000356396 RGS12O14924 1447 aa17.42■□□□□ 0.38
LSS-201ENST00000356396 CCDC30Q5VVM6 783 aa17.42■□□□□ 0.38
LSS-201ENST00000356396 IPO9Q96P70 1041 aaKnown RBP17.42■□□□□ 0.38
LSS-201ENST00000356396 CHD1LQ86WJ1 897 aa17.42■□□□□ 0.38
LSS-201ENST00000356396 PHKG2P15735 406 aa17.41■□□□□ 0.38
LSS-201ENST00000356396 DTNBO60941 627 aa17.41■□□□□ 0.38
LSS-201ENST00000356396 CCDC85AQ96PX6 553 aaPredicted RBP17.41■□□□□ 0.38
LSS-201ENST00000356396 CEP85Q6P2H3 762 aa17.4■□□□□ 0.38
LSS-201ENST00000356396 SLKQ9H2G2 1235 aaPredicted RBP17.4■□□□□ 0.38
LSS-201ENST00000356396 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
LSS-201ENST00000356396 PA2G4Q9UQ80 394 aaKnown RBP17.4■□□□□ 0.38
LSS-201ENST00000356396 FOXD4L1Q9NU39 408 aa17.4■□□□□ 0.38
LSS-201ENST00000356396 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
LSS-201ENST00000356396 MAP3K2Q9Y2U5 619 aa17.39■□□□□ 0.37
LSS-201ENST00000356396 GIGYF1O75420 1035 aaPredicted RBP17.38■□□□□ 0.37
LSS-201ENST00000356396 A1BGP04217 495 aa17.38■□□□□ 0.37
LSS-201ENST00000356396 ZNF790Q6PG37 636 aa17.38■□□□□ 0.37
LSS-201ENST00000356396 SIL1Q9H173 461 aa17.38■□□□□ 0.37
LSS-201ENST00000356396 CABP4P57796 275 aa17.38■□□□□ 0.37
LSS-201ENST00000356396 USP44Q9H0E7 712 aa17.37■□□□□ 0.37
LSS-201ENST00000356396 MS4A1P11836 297 aa17.37■□□□□ 0.37
LSS-201ENST00000356396 SMC5Q8IY18 1101 aa17.37■□□□□ 0.37
LSS-201ENST00000356396 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.37■□□□□ 0.37
LSS-201ENST00000356396 NUTM1Q86Y26 1132 aa17.37■□□□□ 0.37
LSS-201ENST00000356396 RBM42Q9BTD8 480 aaKnown RBP17.36■□□□□ 0.37
LSS-201ENST00000356396 XIRP1Q702N8 1843 aaKnown RBP17.36■□□□□ 0.37
LSS-201ENST00000356396 RTL1A6NKG5 1358 aa17.36■□□□□ 0.37
LSS-201ENST00000356396 NUCB1Q02818 461 aa17.36■□□□□ 0.37
LSS-201ENST00000356396 INTS3Q68E01 1043 aaKnown RBP17.36■□□□□ 0.37
LSS-201ENST00000356396 COPS6Q7L5N1 327 aa17.36■□□□□ 0.37
LSS-201ENST00000356396 HDAC1Q13547 482 aaPredicted RBP17.35■□□□□ 0.37
LSS-201ENST00000356396 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
LSS-201ENST00000356396 ASAP1Q9ULH1 1129 aa17.35■□□□□ 0.37
LSS-201ENST00000356396 KDM6AO15550 1401 aaPredicted RBP17.35■□□□□ 0.37
LSS-201ENST00000356396 IFNL2Q8IZJ0 200 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 XAGE3Q8WTP9 111 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 ZBTB3Q9H5J0 574 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 SLC52A2Q9HAB3 445 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 FAM177BA6PVY3 158 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 GSPT1P15170 499 aaKnown RBP17.34■□□□□ 0.37
LSS-201ENST00000356396 AMOTQ4VCS5 1084 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 CEMIPQ8WUJ3 1361 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 NCBP3Q53F19 620 aaKnown RBP17.34■□□□□ 0.37
LSS-201ENST00000356396 TTC5Q8N0Z6 440 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 ZCRB1Q8TBF4 217 aaKnown RBP17.34■□□□□ 0.37
LSS-201ENST00000356396 ARHGAP45Q92619 1136 aa17.34■□□□□ 0.37
LSS-201ENST00000356396 SOS2Q07890 1332 aaPredicted RBP17.33■□□□□ 0.37
LSS-201ENST00000356396 ANP32EQ9BTT0 268 aa17.33■□□□□ 0.37
LSS-201ENST00000356396 TRPM3Q9HCF6 1732 aaPredicted RBP17.33■□□□□ 0.36
LSS-201ENST00000356396 SPG7Q9UQ90 795 aa17.32■□□□□ 0.36
LSS-201ENST00000356396 NDUFB9Q9Y6M9 179 aa17.32■□□□□ 0.36
LSS-201ENST00000356396 UBTFL1P0CB47 393 aaPredicted RBP17.32■□□□□ 0.36
LSS-201ENST00000356396 PPP1R42Q7Z4L9 355 aa17.32■□□□□ 0.36
LSS-201ENST00000356396 RIC3Q7Z5B4 369 aa17.32■□□□□ 0.36
LSS-201ENST00000356396 SRGAP3O43295 1099 aa17.31■□□□□ 0.36
LSS-201ENST00000356396 TTLL7Q6ZT98 887 aa17.31■□□□□ 0.36
LSS-201ENST00000356396 DNAAF4Q8WXU2 420 aa17.31■□□□□ 0.36
LSS-201ENST00000356396 MYD88Q99836 296 aa17.31■□□□□ 0.36
LSS-201ENST00000356396 PTF1AQ7RTS3 328 aa17.31■□□□□ 0.36
LSS-201ENST00000356396 C9orf78Q9NZ63 289 aaPredicted RBP17.31■□□□□ 0.36
LSS-201ENST00000356396 SURF6O75683 361 aaKnown RBP17.31■□□□□ 0.36
LSS-201ENST00000356396 SRCIN1Q9C0H9 1055 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms