RNA–Protein interactions for RNA: ENST00000356005.8

FN1-204, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,846 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-204ENST00000356005 LDHCP07864 332 aa13.31□□□□□ -0.28
FN1-204ENST00000356005 NYXQ9GZU5 481 aa13.31□□□□□ -0.28
FN1-204ENST00000356005 CFAP43Q8NDM7 1665 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 KIF1BPQ96EK5 621 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 C8orf37Q96NL8 207 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 ZNHIT6Q9NWK9 470 aaKnown RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 IDH1O75874 414 aaKnown RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 NUP133Q8WUM0 1156 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 PLCH2O75038 1416 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 PDCL3Q9H2J4 239 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 RABEP1Q15276 862 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 ZNF444Q8N0Y2 327 aaPredicted RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 DBF4Q9UBU7 674 aaPredicted RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 LRRC59Q96AG4 307 aaKnown RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 C6orf229H3BNL8 230 aa13.3□□□□□ -0.28
FN1-204ENST00000356005 TMPOP42166 694 aaKnown RBP13.3□□□□□ -0.28
FN1-204ENST00000356005 SYCP2Q9BX26 1530 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 HLA-DOAP06340 250 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 TTF1Q15361 905 aaPredicted RBP13.29□□□□□ -0.28
FN1-204ENST00000356005 FAM13BQ9NYF5 915 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 HDAC9Q9UKV0 1011 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 SETQ01105 290 aaPredicted RBP13.29□□□□□ -0.28
FN1-204ENST00000356005 IQCA1Q86XH1 822 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 SETDB2Q96T68 719 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
FN1-204ENST00000356005 PPP1R12BO60237 982 aaPredicted RBP13.29□□□□□ -0.28
FN1-204ENST00000356005 NF2P35240 595 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 DUSP27Q5VZP5 1158 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 ZNF622Q969S3 477 aaKnown RBP eCLIP13.29□□□□□ -0.28
FN1-204ENST00000356005 ACBD3Q9H3P7 528 aa13.29□□□□□ -0.28
FN1-204ENST00000356005 GSTO1P78417 241 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 OGFOD1Q8N543 542 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 RNF41Q9H4P4 317 aaPredicted RBP13.28□□□□□ -0.28
FN1-204ENST00000356005 SMC2O95347 1197 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 STK38Q15208 465 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 RAB34Q9BZG1 259 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 NAIPQ13075 1403 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 CCP110O43303 1012 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 POTEJP0CG39 1038 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 TRAF1Q13077 416 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 ABCA5Q8WWZ7 1642 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 SPDYE4A6NLX3 237 aa13.28□□□□□ -0.28
FN1-204ENST00000356005 FBXO31Q5XUX0 539 aaPredicted RBP13.27□□□□□ -0.28
FN1-204ENST00000356005 NAPBQ9H115 298 aa13.27□□□□□ -0.28
FN1-204ENST00000356005 ZHX3Q9H4I2 956 aa13.27□□□□□ -0.28
FN1-204ENST00000356005 NOS1P29475 1434 aa13.27□□□□□ -0.28
FN1-204ENST00000356005 BLOC1S2Q6QNY1 142 aa13.27□□□□□ -0.28
FN1-204ENST00000356005 CWC25Q9NXE8 425 aaPredicted RBP13.27□□□□□ -0.28
FN1-204ENST00000356005 UGGT2Q9NYU1 1516 aa13.27□□□□□ -0.29
FN1-204ENST00000356005 CCDC152Q4G0S7 254 aa13.27□□□□□ -0.29
FN1-204ENST00000356005 FEZ1Q99689 392 aa13.27□□□□□ -0.29
FN1-204ENST00000356005 CFAP45Q9UL16 551 aa13.27□□□□□ -0.29
FN1-204ENST00000356005 C19orf44Q9H6X5 657 aa13.27□□□□□ -0.29
FN1-204ENST00000356005 PTPRCP08575 1304 aa13.27□□□□□ -0.29
FN1-204ENST00000356005 WDR62O43379 1518 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 NBPF6Q5VWK0 638 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 NBPF5PQ86XG9 351 aaPredicted RBP13.26□□□□□ -0.29
FN1-204ENST00000356005 CCDC150Q8NCX0 1101 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 NBPF4Q96M43 638 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 ATP2B1P20020 1258 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 DDB1Q16531 1140 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 WDR78Q5VTH9 848 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 RPAP2Q8IXW5 612 aaPredicted RBP13.26□□□□□ -0.29
FN1-204ENST00000356005 ZCRB1Q8TBF4 217 aaKnown RBP13.26□□□□□ -0.29
FN1-204ENST00000356005 RIMS2Q9UQ26 1411 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 TRPM2O94759 1503 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 GLRX3O76003 335 aaKnown RBP13.26□□□□□ -0.29
FN1-204ENST00000356005 NEK4P51957 841 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 CABP5Q9NP86 173 aa13.26□□□□□ -0.29
FN1-204ENST00000356005 MYD88Q99836 296 aa13.25□□□□□ -0.29
FN1-204ENST00000356005 MBD3O95983 291 aa13.25□□□□□ -0.29
FN1-204ENST00000356005 ALDH1L2Q3SY69 923 aa13.25□□□□□ -0.29
FN1-204ENST00000356005 ANKRD24Q8TF21 1146 aa13.25□□□□□ -0.29
FN1-204ENST00000356005 CDCA7Q9BWT1 371 aaPredicted RBP13.25□□□□□ -0.29
FN1-204ENST00000356005 ERLIN2O94905 339 aa13.25□□□□□ -0.29
FN1-204ENST00000356005 SCLT1Q96NL6 688 aa13.25□□□□□ -0.29
FN1-204ENST00000356005 TSR2Q969E8 191 aaKnown RBP13.25□□□□□ -0.29
FN1-204ENST00000356005 B4DLN1 442 aa13.24□□□□□ -0.29
FN1-204ENST00000356005 HMGB1P09429 215 aaKnown RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 SNRPA1P09661 255 aaKnown RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 MRPL12P52815 198 aaKnown RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 MVPQ14764 893 aaKnown RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 STK11IPQ8N1F8 1099 aa13.24□□□□□ -0.29
FN1-204ENST00000356005 TNNT3P45378 269 aaPredicted RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 CCDC12Q8WUD4 166 aaPredicted RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 CHD1O14646 1710 aa13.24□□□□□ -0.29
FN1-204ENST00000356005 ZRSR2Q15696 482 aaKnown RBP13.24□□□□□ -0.29
FN1-204ENST00000356005 DRC1Q96MC2 740 aa13.24□□□□□ -0.29
FN1-204ENST00000356005 ANKRD18AQ8IVF6 992 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 LMOD1P29536 600 aaPredicted RBP13.23□□□□□ -0.29
FN1-204ENST00000356005 PDILTQ8N807 584 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 CTCFLQ8NI51 663 aaPredicted RBP13.23□□□□□ -0.29
FN1-204ENST00000356005 GPATCH8Q9UKJ3 1502 aaKnown RBP13.23□□□□□ -0.29
FN1-204ENST00000356005 ATP10BO94823 1461 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 CAGE1Q8TC20 777 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 ATP6V1AP38606 617 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 ZSCAN31Q96LW9 406 aaPredicted RBP13.23□□□□□ -0.29
FN1-204ENST00000356005 PARP3Q9Y6F1 533 aa13.23□□□□□ -0.29
FN1-204ENST00000356005 PDE4BQ07343 736 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms