RNA–Protein interactions for RNA: ENST00000355841.6

PDLIM7-202, Transcript of PDZ and LIM domain 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PDLIM7, Length 1,689 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-202ENST00000355841 BTAF1O14981 1849 aa23.54■■□□□ 1.36
PDLIM7-202ENST00000355841 HTATSF1O43719 755 aaKnown RBP23.54■■□□□ 1.36
PDLIM7-202ENST00000355841 TEFQ10587 303 aa23.54■■□□□ 1.36
PDLIM7-202ENST00000355841 ADAMTS7Q9UKP4 1686 aa23.53■■□□□ 1.36
PDLIM7-202ENST00000355841 BAG6P46379 1132 aa23.53■■□□□ 1.36
PDLIM7-202ENST00000355841 EZH2Q15910 746 aaKnown RBP23.51■■□□□ 1.35
PDLIM7-202ENST00000355841 VIRMAQ69YN4 1812 aaKnown RBP23.51■■□□□ 1.35
PDLIM7-202ENST00000355841 SLC39A6Q13433 755 aa23.51■■□□□ 1.35
PDLIM7-202ENST00000355841 ATG3Q9NT62 314 aa23.51■■□□□ 1.35
PDLIM7-202ENST00000355841 MRC1P22897 1456 aa23.5■■□□□ 1.35
PDLIM7-202ENST00000355841 CAMKK2Q96RR4 588 aa23.5■■□□□ 1.35
PDLIM7-202ENST00000355841 PLSCR1O15162 318 aa23.49■■□□□ 1.35
PDLIM7-202ENST00000355841 KCNQ4P56696 695 aa23.49■■□□□ 1.35
PDLIM7-202ENST00000355841 LMOD3Q0VAK6 560 aa23.49■■□□□ 1.35
PDLIM7-202ENST00000355841 MIS18AQ9NYP9 233 aa23.48■■□□□ 1.35
PDLIM7-202ENST00000355841 PALLDQ8WX93 1383 aa23.48■■□□□ 1.35
PDLIM7-202ENST00000355841 PROM2Q8N271 834 aa23.48■■□□□ 1.35
PDLIM7-202ENST00000355841 BTBD11A6QL63 1104 aa23.45■■□□□ 1.34
PDLIM7-202ENST00000355841 PTCD1O75127 700 aaKnown RBP23.45■■□□□ 1.34
PDLIM7-202ENST00000355841 TXNRD1Q16881 649 aa23.45■■□□□ 1.34
PDLIM7-202ENST00000355841 KCNQ3O43525 872 aa23.44■■□□□ 1.34
PDLIM7-202ENST00000355841 TAF7Q15545 349 aaPredicted RBP23.44■■□□□ 1.34
PDLIM7-202ENST00000355841 SMARCC1Q92922 1105 aaPredicted RBP23.44■■□□□ 1.34
PDLIM7-202ENST00000355841 RBM42Q9BTD8 480 aaKnown RBP23.44■■□□□ 1.34
PDLIM7-202ENST00000355841 LRRC4BQ9NT99 713 aa23.43■■□□□ 1.34
PDLIM7-202ENST00000355841 SIPA1L3O60292 1781 aaPredicted RBP23.42■■□□□ 1.34
PDLIM7-202ENST00000355841 WWC1Q8IX03 1113 aa23.42■■□□□ 1.34
PDLIM7-202ENST00000355841 LAS1LQ9Y4W2 734 aaKnown RBP23.42■■□□□ 1.34
PDLIM7-202ENST00000355841 LOC102724428A0A0B4J2F2 783 aa23.41■■□□□ 1.34
PDLIM7-202ENST00000355841 SIK1P57059 783 aa23.41■■□□□ 1.34
PDLIM7-202ENST00000355841 ZNF790Q6PG37 636 aa23.41■■□□□ 1.34
PDLIM7-202ENST00000355841 CCNL1Q9UK58 526 aaPredicted RBP23.41■■□□□ 1.34
PDLIM7-202ENST00000355841 SLC4A9Q96Q91 983 aa23.41■■□□□ 1.34
PDLIM7-202ENST00000355841 TTC5Q8N0Z6 440 aa23.4■■□□□ 1.34
PDLIM7-202ENST00000355841 CCDC27Q2M243 656 aa23.39■■□□□ 1.34
PDLIM7-202ENST00000355841 ZNF496Q96IT1 587 aaPredicted RBP23.38■■□□□ 1.33
PDLIM7-202ENST00000355841 LY75O60449 1722 aa23.38■■□□□ 1.33
PDLIM7-202ENST00000355841 ATP6V1AP38606 617 aa23.38■■□□□ 1.33
PDLIM7-202ENST00000355841 TSPYL4Q9UJ04 414 aa23.38■■□□□ 1.33
PDLIM7-202ENST00000355841 PAPPAQ13219 1627 aa23.38■■□□□ 1.33
PDLIM7-202ENST00000355841 SLC27A3Q5K4L6 730 aa23.37■■□□□ 1.33
PDLIM7-202ENST00000355841 RGPD3A6NKT7 1758 aaPredicted RBP23.36■■□□□ 1.33
PDLIM7-202ENST00000355841 RGPD4Q7Z3J3 1758 aa23.36■■□□□ 1.33
PDLIM7-202ENST00000355841 KCPQ6ZWJ8 1503 aa23.36■■□□□ 1.33
PDLIM7-202ENST00000355841 ITPK1Q13572 414 aa23.36■■□□□ 1.33
PDLIM7-202ENST00000355841 CHL1O00533 1208 aa23.34■■□□□ 1.33
PDLIM7-202ENST00000355841 NCBP3Q53F19 620 aaKnown RBP23.34■■□□□ 1.33
PDLIM7-202ENST00000355841 RREB1Q92766 1687 aa23.33■■□□□ 1.33
PDLIM7-202ENST00000355841 HNRNPUQ00839 825 aaKnown RBP eCLIP23.33■■□□□ 1.33
PDLIM7-202ENST00000355841 CALD1Q05682 793 aaKnown RBP23.33■■□□□ 1.33
PDLIM7-202ENST00000355841 CFAP44Q96MT7 982 aa23.33■■□□□ 1.33
PDLIM7-202ENST00000355841 ANO8Q9HCE9 1232 aaPredicted RBP23.33■■□□□ 1.33
PDLIM7-202ENST00000355841 PRAMEF22A3QJZ6 481 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 DNAJC10Q8IXB1 793 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 LINC00116Q8NCU8 138 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 FMNL2Q96PY5 1086 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 MBIPQ9NS73 344 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 ZNF853P0CG23 659 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 IFT57Q9NWB7 429 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 NUP188Q5SRE5 1749 aa23.32■■□□□ 1.32
PDLIM7-202ENST00000355841 UBR2Q8IWV8 1755 aa23.31■■□□□ 1.32
PDLIM7-202ENST00000355841 EIF4A1P60842 406 aaKnown RBP23.31■■□□□ 1.32
PDLIM7-202ENST00000355841 NGEFQ8N5V2 710 aa23.31■■□□□ 1.32
PDLIM7-202ENST00000355841 SPINK5Q9NQ38 1064 aaPredicted RBP23.31■■□□□ 1.32
PDLIM7-202ENST00000355841 ZNF521Q96K83 1311 aa23.31■■□□□ 1.32
PDLIM7-202ENST00000355841 GNAI1P63096 354 aa23.3■■□□□ 1.32
PDLIM7-202ENST00000355841 KRT24Q2M2I5 525 aa23.3■■□□□ 1.32
PDLIM7-202ENST00000355841 WDR63Q8IWG1 891 aa23.3■■□□□ 1.32
PDLIM7-202ENST00000355841 TSR2Q969E8 191 aaKnown RBP23.3■■□□□ 1.32
PDLIM7-202ENST00000355841 HEG1Q9ULI3 1381 aa23.3■■□□□ 1.32
PDLIM7-202ENST00000355841 KDM3BQ7LBC6 1761 aa23.3■■□□□ 1.32
PDLIM7-202ENST00000355841 ZNF827Q17R98 1081 aa23.29■■□□□ 1.32
PDLIM7-202ENST00000355841 BABAM1Q9NWV8 329 aa23.29■■□□□ 1.32
PDLIM7-202ENST00000355841 SMIM5Q71RC9 77 aa23.27■■□□□ 1.32
PDLIM7-202ENST00000355841 VSIG10Q8N0Z9 540 aa23.27■■□□□ 1.32
PDLIM7-202ENST00000355841 C5P01031 1676 aa23.26■■□□□ 1.31
PDLIM7-202ENST00000355841 IL16Q14005 1332 aa23.26■■□□□ 1.31
PDLIM7-202ENST00000355841 AKT1S1Q96B36 256 aa23.26■■□□□ 1.31
PDLIM7-202ENST00000355841 TJP1Q07157 1748 aa23.26■■□□□ 1.31
PDLIM7-202ENST00000355841 SNRPA1P09661 255 aaKnown RBP23.25■■□□□ 1.31
PDLIM7-202ENST00000355841 NBPF14Q5TI25 921 aa23.25■■□□□ 1.31
PDLIM7-202ENST00000355841 USP16Q9Y5T5 823 aa23.25■■□□□ 1.31
PDLIM7-202ENST00000355841 GIGYF1O75420 1035 aaPredicted RBP23.25■■□□□ 1.31
PDLIM7-202ENST00000355841 CYP19A1P11511 503 aaPredicted RBP23.25■■□□□ 1.31
PDLIM7-202ENST00000355841 STK32BQ9NY57 414 aa23.25■■□□□ 1.31
PDLIM7-202ENST00000355841 TAF1LQ8IZX4 1826 aa23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 PSDA5PKW4 1024 aaPredicted RBP23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 CRKLP46109 303 aaKnown RBP23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 R3HDM1Q15032 1099 aaKnown RBP23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 SLC15A2Q16348 729 aa23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 AMIGO3Q86WK7 504 aa23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 CDCA7LQ96GN5 454 aa23.24■■□□□ 1.31
PDLIM7-202ENST00000355841 ELL2O00472 640 aaPredicted RBP23.23■■□□□ 1.31
PDLIM7-202ENST00000355841 AK7Q96M32 723 aa23.23■■□□□ 1.31
PDLIM7-202ENST00000355841 TFCP2L1Q9NZI6 479 aa23.23■■□□□ 1.31
PDLIM7-202ENST00000355841 ZNF831Q5JPB2 1677 aa23.23■■□□□ 1.31
PDLIM7-202ENST00000355841 FANCIQ9NVI1 1328 aa23.23■■□□□ 1.31
PDLIM7-202ENST00000355841 C4BP0C0L5 1744 aa23.23■■□□□ 1.31
PDLIM7-202ENST00000355841 GOLGA2Q08379 1002 aa23.22■■□□□ 1.31
PDLIM7-202ENST00000355841 GNPATO15228 680 aa23.22■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms