RNA–Protein interactions for RNA: ENST00000355311.9

EBF3-201, Transcript of early B cell factor 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene EBF3, Length 2,993 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-201ENST00000355311 VIRMAQ69YN4 1812 aaKnown RBP16.93■□□□□ 0.3
EBF3-201ENST00000355311 AATKQ6ZMQ8 1374 aa16.93■□□□□ 0.3
EBF3-201ENST00000355311 GNAT3A8MTJ3 354 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 HOXC9P31274 260 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 CHMP4BQ9H444 224 aaKnown RBP16.92■□□□□ 0.3
EBF3-201ENST00000355311 GDPD2Q9HCC8 539 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 ADAMTS13Q76LX8 1427 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 KIAA1211Q6ZU35 1233 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 RPAP2Q8IXW5 612 aaPredicted RBP16.92■□□□□ 0.3
EBF3-201ENST00000355311 CDK12Q9NYV4 1490 aaPredicted RBP16.92■□□□□ 0.3
EBF3-201ENST00000355311 USP6P35125 1406 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 PIK3R4Q99570 1358 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 SURF6O75683 361 aaKnown RBP16.92■□□□□ 0.3
EBF3-201ENST00000355311 GNAI2P04899 355 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 NBPF6Q5VWK0 638 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 CAVIN1Q6NZI2 390 aaKnown RBP16.92■□□□□ 0.3
EBF3-201ENST00000355311 NBPF4Q96M43 638 aa16.92■□□□□ 0.3
EBF3-201ENST00000355311 PRPF40AO75400 957 aaKnown RBP16.91■□□□□ 0.3
EBF3-201ENST00000355311 NBPF7P0C2Y1 421 aaPredicted RBP16.91■□□□□ 0.3
EBF3-201ENST00000355311 CPA1P15085 419 aa16.91■□□□□ 0.3
EBF3-201ENST00000355311 PSME1Q06323 249 aa16.91■□□□□ 0.3
EBF3-201ENST00000355311 RAB3GAP1Q15042 981 aa16.9■□□□□ 0.3
EBF3-201ENST00000355311 ORAI2Q96SN7 254 aa16.9■□□□□ 0.3
EBF3-201ENST00000355311 RGS12O14924 1447 aa16.9■□□□□ 0.3
EBF3-201ENST00000355311 TAF7Q15545 349 aaPredicted RBP16.89■□□□□ 0.3
EBF3-201ENST00000355311 GBP4Q96PP9 640 aa16.89■□□□□ 0.3
EBF3-201ENST00000355311 CHPF2Q9P2E5 772 aa16.89■□□□□ 0.3
EBF3-201ENST00000355311 SNX21Q969T3 373 aa16.89■□□□□ 0.29
EBF3-201ENST00000355311 PI4KAP2A4QPH2 592 aa16.89■□□□□ 0.29
EBF3-201ENST00000355311 BAG4O95429 457 aaKnown RBP16.89■□□□□ 0.29
EBF3-201ENST00000355311 ZC3H6P61129 1189 aaKnown RBP16.89■□□□□ 0.29
EBF3-201ENST00000355311 PI4KAP1Q8N8J0 262 aa16.89■□□□□ 0.29
EBF3-201ENST00000355311 FAM13BQ9NYF5 915 aa16.89■□□□□ 0.29
EBF3-201ENST00000355311 ATP10DQ9P241 1426 aa16.88■□□□□ 0.29
EBF3-201ENST00000355311 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
EBF3-201ENST00000355311 OS9Q13438 667 aaPredicted RBP16.88■□□□□ 0.29
EBF3-201ENST00000355311 USP44Q9H0E7 712 aa16.88■□□□□ 0.29
EBF3-201ENST00000355311 NSFL1CQ9UNZ2 370 aaKnown RBP16.88■□□□□ 0.29
EBF3-201ENST00000355311 PA2G4Q9UQ80 394 aaKnown RBP16.88■□□□□ 0.29
EBF3-201ENST00000355311 HMMRO75330 724 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 DDIT3P35638 169 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 CASC1Q6TDU7 716 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 LRRCC1Q9C099 1032 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 CRB1P82279 1406 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 KNDC1Q76NI1 1749 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 DDX11L8A8MPP1 907 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 SRGAP3O43295 1099 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 UBTFL1P0CB47 393 aaPredicted RBP16.87■□□□□ 0.29
EBF3-201ENST00000355311 CCDC30Q5VVM6 783 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 PPP1R42Q7Z4L9 355 aa16.87■□□□□ 0.29
EBF3-201ENST00000355311 CEP170BQ9Y4F5 1589 aaPredicted RBP16.87■□□□□ 0.29
EBF3-201ENST00000355311 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.86■□□□□ 0.29
EBF3-201ENST00000355311 RNF214Q8ND24 703 aa16.86■□□□□ 0.29
EBF3-201ENST00000355311 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
EBF3-201ENST00000355311 MX1P20591 662 aa16.86■□□□□ 0.29
EBF3-201ENST00000355311 SLC39A6Q13433 755 aa16.86■□□□□ 0.29
EBF3-201ENST00000355311 PROSER3Q2NL68 480 aa16.86■□□□□ 0.29
EBF3-201ENST00000355311 ANKRD26Q9UPS8 1709 aa16.85■□□□□ 0.29
EBF3-201ENST00000355311 CWF19L2Q2TBE0 894 aaKnown RBP16.85■□□□□ 0.29
EBF3-201ENST00000355311 CDC42BPGQ6DT37 1551 aa16.85■□□□□ 0.29
EBF3-201ENST00000355311 ERC2O15083 957 aa16.85■□□□□ 0.29
EBF3-201ENST00000355311 SIL1Q9H173 461 aa16.85■□□□□ 0.29
EBF3-201ENST00000355311 PTPRCP08575 1304 aa16.85■□□□□ 0.29
EBF3-201ENST00000355311 FLT4P35916 1363 aa16.85■□□□□ 0.29
EBF3-201ENST00000355311 KLHDC4Q8TBB5 520 aa16.84■□□□□ 0.29
EBF3-201ENST00000355311 CCT4P50991 539 aaKnown RBP16.84■□□□□ 0.29
EBF3-201ENST00000355311 CWC27Q6UX04 472 aaKnown RBP16.84■□□□□ 0.29
EBF3-201ENST00000355311 THEMISQ8N1K5 641 aaPredicted RBP16.84■□□□□ 0.29
EBF3-201ENST00000355311 RABEP1Q15276 862 aa16.83■□□□□ 0.29
EBF3-201ENST00000355311 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.29
EBF3-201ENST00000355311 OVOS2A0A0J9YW53 1432 aa16.83■□□□□ 0.28
EBF3-201ENST00000355311 TEFQ10587 303 aa16.83■□□□□ 0.28
EBF3-201ENST00000355311 OVOS2Q6IE36 1432 aa16.83■□□□□ 0.28
EBF3-201ENST00000355311 PHF8Q9UPP1 1060 aa16.83■□□□□ 0.28
EBF3-201ENST00000355311 MYL6BP14649 208 aa16.83■□□□□ 0.28
EBF3-201ENST00000355311 CABLES1Q8TDN4 633 aa16.83■□□□□ 0.28
EBF3-201ENST00000355311 PRDM10Q9NQV6 1147 aa16.82■□□□□ 0.28
EBF3-201ENST00000355311 SOS1Q07889 1333 aaPredicted RBP16.82■□□□□ 0.28
EBF3-201ENST00000355311 ST18O60284 1047 aa16.82■□□□□ 0.28
EBF3-201ENST00000355311 ZDHHC9Q9Y397 364 aa16.82■□□□□ 0.28
EBF3-201ENST00000355311 NDUFB9Q9Y6M9 179 aa16.82■□□□□ 0.28
EBF3-201ENST00000355311 PEAK1Q9H792 1746 aa16.81■□□□□ 0.28
EBF3-201ENST00000355311 IGSF1Q8N6C5 1336 aa16.81■□□□□ 0.28
EBF3-201ENST00000355311 BTBD11A6QL63 1104 aa16.81■□□□□ 0.28
EBF3-201ENST00000355311 TMX3Q96JJ7 454 aa16.81■□□□□ 0.28
EBF3-201ENST00000355311 PDCL3Q9H2J4 239 aa16.81■□□□□ 0.28
EBF3-201ENST00000355311 R3HCC1Q9Y3T6 440 aaKnown RBP16.81■□□□□ 0.28
EBF3-201ENST00000355311 RGPD8O14715 1765 aaPredicted RBP16.81■□□□□ 0.28
EBF3-201ENST00000355311 REC8O95072 547 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.8■□□□□ 0.28
EBF3-201ENST00000355311 SBNO1A3KN83 1393 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 GOLGA6L22H0YM25 854 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 ATP8B2P98198 1209 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 TCEANC2Q96MN5 208 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 ESYT1Q9BSJ8 1104 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 AXIN2Q9Y2T1 843 aa16.8■□□□□ 0.28
EBF3-201ENST00000355311 HAP1P54257 671 aaPredicted RBP16.79■□□□□ 0.28
EBF3-201ENST00000355311 COL9A3Q14050 684 aaPredicted RBP16.79■□□□□ 0.28
EBF3-201ENST00000355311 TBX22Q9Y458 520 aa16.79■□□□□ 0.28
EBF3-201ENST00000355311 CHMLP26374 656 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms