RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 NLRP6P59044 892 aa22.19■■□□□ 1.14
PTP4A3-202ENST00000349124 UNC5CLQ8IV45 518 aa22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 OSBPL3Q9H4L5 887 aa22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 ITSN1Q15811 1721 aa22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 NASPP49321 788 aaPredicted RBP22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 IL17REQ8NFR9 667 aa22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 RIMS1Q86UR5 1692 aaKnown RBP22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 SSH2Q76I76 1423 aa22.18■■□□□ 1.14
PTP4A3-202ENST00000349124 PTMSP20962 102 aa22.17■■□□□ 1.14
PTP4A3-202ENST00000349124 LRRFIP2Q9Y608 721 aaKnown RBP22.17■■□□□ 1.14
PTP4A3-202ENST00000349124 ARHGEF10O15013 1369 aa22.17■■□□□ 1.14
PTP4A3-202ENST00000349124 TRIM6-TRIM34B2RNG4 842 aa22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 USHBP1Q8N6Y0 703 aa22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 LRRCC1Q9C099 1032 aa22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 CEP170BQ9Y4F5 1589 aaPredicted RBP22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 GPT2Q8TD30 523 aa22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 IL1RAPL2Q9NP60 686 aa22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 NSFL1CQ9UNZ2 370 aaKnown RBP22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 IGSF1Q8N6C5 1336 aa22.16■■□□□ 1.14
PTP4A3-202ENST00000349124 ZSCAN23Q3MJ62 389 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 FLT4P35916 1363 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 SALL3Q9BXA9 1300 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 TMX3Q96JJ7 454 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 ESYT1Q9BSJ8 1104 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 IL25Q9H293 177 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 MX1P20591 662 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 ATP8B2P98198 1209 aa22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 CWC22Q9HCG8 908 aaKnown RBP22.15■■□□□ 1.14
PTP4A3-202ENST00000349124 PHAXQ9H814 394 aaKnown RBP22.14■■□□□ 1.13
PTP4A3-202ENST00000349124 ANO2Q9NQ90 1003 aa22.14■■□□□ 1.13
PTP4A3-202ENST00000349124 SBNO1A3KN83 1393 aa22.14■■□□□ 1.13
PTP4A3-202ENST00000349124 CCDC30Q5VVM6 783 aa22.14■■□□□ 1.13
PTP4A3-202ENST00000349124 GNAT3A8MTJ3 354 aa22.13■■□□□ 1.13
PTP4A3-202ENST00000349124 MAP4K4O95819 1239 aaPredicted RBP22.13■■□□□ 1.13
PTP4A3-202ENST00000349124 USP44Q9H0E7 712 aa22.13■■□□□ 1.13
PTP4A3-202ENST00000349124 KDRP35968 1356 aa22.13■■□□□ 1.13
PTP4A3-202ENST00000349124 CHMLP26374 656 aa22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 FOXD4L6Q3SYB3 417 aaPredicted RBP22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 FOXD4L3Q6VB84 417 aaPredicted RBP22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 UPF3BQ9BZI7 483 aaKnown RBP22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 RBSNQ9H1K0 784 aa22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 PRIM1P49642 420 aaKnown RBP22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 NUTM1Q86Y26 1132 aa22.12■■□□□ 1.13
PTP4A3-202ENST00000349124 PLEKHG1Q9ULL1 1385 aa22.11■■□□□ 1.13
PTP4A3-202ENST00000349124 TTC21AQ8NDW8 1320 aa22.11■■□□□ 1.13
PTP4A3-202ENST00000349124 HOXC9P31274 260 aa22.11■■□□□ 1.13
PTP4A3-202ENST00000349124 RGPD1P0DJD0 1748 aa22.11■■□□□ 1.13
PTP4A3-202ENST00000349124 GNAI3P08754 354 aa22.1■■□□□ 1.13
PTP4A3-202ENST00000349124 EID1Q9Y6B2 187 aa22.1■■□□□ 1.13
PTP4A3-202ENST00000349124 EIF2S2P20042 333 aaKnown RBP22.09■■□□□ 1.13
PTP4A3-202ENST00000349124 ZNF445P59923 1031 aa22.09■■□□□ 1.13
PTP4A3-202ENST00000349124 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
PTP4A3-202ENST00000349124 RBM33Q96EV2 1170 aaKnown RBP22.08■■□□□ 1.13
PTP4A3-202ENST00000349124 PPP1R9BQ96SB3 815 aa22.08■■□□□ 1.13
PTP4A3-202ENST00000349124 TMEM63CQ9P1W3 806 aa22.08■■□□□ 1.13
PTP4A3-202ENST00000349124 TAF7Q15545 349 aaPredicted RBP22.08■■□□□ 1.12
PTP4A3-202ENST00000349124 IBTKQ9P2D0 1353 aaPredicted RBP22.07■■□□□ 1.12
PTP4A3-202ENST00000349124 CCDC173Q0VFZ6 552 aa22.07■■□□□ 1.12
PTP4A3-202ENST00000349124 ABTB2Q8N961 1025 aa22.07■■□□□ 1.12
PTP4A3-202ENST00000349124 PLEKHG5O94827 1062 aa22.07■■□□□ 1.12
PTP4A3-202ENST00000349124 ANXA1P04083 346 aa22.06■■□□□ 1.12
PTP4A3-202ENST00000349124 HDGFL1Q5TGJ6 251 aa22.06■■□□□ 1.12
PTP4A3-202ENST00000349124 UBR1Q8IWV7 1749 aa22.06■■□□□ 1.12
PTP4A3-202ENST00000349124 UBTFL1P0CB47 393 aaPredicted RBP22.06■■□□□ 1.12
PTP4A3-202ENST00000349124 LARP6Q9BRS8 491 aaKnown RBP22.05■■□□□ 1.12
PTP4A3-202ENST00000349124 SYCE3A1L190 88 aa22.05■■□□□ 1.12
PTP4A3-202ENST00000349124 DTNBO60941 627 aa22.05■■□□□ 1.12
PTP4A3-202ENST00000349124 SURF6O75683 361 aaKnown RBP22.05■■□□□ 1.12
PTP4A3-202ENST00000349124 PPP1R42Q7Z4L9 355 aa22.05■■□□□ 1.12
PTP4A3-202ENST00000349124 LGR6Q9HBX8 967 aa22.05■■□□□ 1.12
PTP4A3-202ENST00000349124 KCNQ3O43525 872 aa22.04■■□□□ 1.12
PTP4A3-202ENST00000349124 GDPD2Q9HCC8 539 aa22.04■■□□□ 1.12
PTP4A3-202ENST00000349124 STAP2Q9UGK3 403 aa22.04■■□□□ 1.12
PTP4A3-202ENST00000349124 ZBTB7CA1YPR0 619 aa22.03■■□□□ 1.12
PTP4A3-202ENST00000349124 HTATSF1O43719 755 aaKnown RBP22.03■■□□□ 1.12
PTP4A3-202ENST00000349124 NBPF7P0C2Y1 421 aaPredicted RBP22.03■■□□□ 1.12
PTP4A3-202ENST00000349124 KCNA6P17658 529 aa22.03■■□□□ 1.12
PTP4A3-202ENST00000349124 TOPAZ1Q8N9V7 1692 aa22.03■■□□□ 1.12
PTP4A3-202ENST00000349124 TBX22Q9Y458 520 aa22.03■■□□□ 1.12
PTP4A3-202ENST00000349124 ANP32BQ92688 251 aaKnown RBP22.02■■□□□ 1.12
PTP4A3-202ENST00000349124 NALCNQ8IZF0 1738 aa22.02■■□□□ 1.12
PTP4A3-202ENST00000349124 BRD1O95696 1058 aa22.01■■□□□ 1.11
PTP4A3-202ENST00000349124 CUL4AQ13619 759 aa22.01■■□□□ 1.11
PTP4A3-202ENST00000349124 TPRNQ4KMQ1 711 aa22.01■■□□□ 1.11
PTP4A3-202ENST00000349124 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
PTP4A3-202ENST00000349124 RNF214Q8ND24 703 aa22■■□□□ 1.11
PTP4A3-202ENST00000349124 SSH3Q8TE77 659 aa22■■□□□ 1.11
PTP4A3-202ENST00000349124 MCCP23508 829 aa22■■□□□ 1.11
PTP4A3-202ENST00000349124 SRGAP3O43295 1099 aa22■■□□□ 1.11
PTP4A3-202ENST00000349124 SOS1Q07889 1333 aaPredicted RBP21.99■■□□□ 1.11
PTP4A3-202ENST00000349124 ZSCAN30Q86W11 494 aa21.99■■□□□ 1.11
PTP4A3-202ENST00000349124 RHPN1Q8TCX5 695 aa21.99■■□□□ 1.11
PTP4A3-202ENST00000349124 CHPF2Q9P2E5 772 aa21.99■■□□□ 1.11
PTP4A3-202ENST00000349124 PI4KAP2A4QPH2 592 aa21.98■■□□□ 1.11
PTP4A3-202ENST00000349124 NBPF6Q5VWK0 638 aa21.98■■□□□ 1.11
PTP4A3-202ENST00000349124 PI4KAP1Q8N8J0 262 aa21.98■■□□□ 1.11
PTP4A3-202ENST00000349124 NBPF4Q96M43 638 aa21.98■■□□□ 1.11
PTP4A3-202ENST00000349124 SRCIN1Q9C0H9 1055 aa21.98■■□□□ 1.11
PTP4A3-202ENST00000349124 RGPD8O14715 1765 aaPredicted RBP21.97■■□□□ 1.11
PTP4A3-202ENST00000349124 GADD45BO75293 160 aaPredicted RBP21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms