RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 LARP1BQ659C4 914 aaKnown RBP17.55■□□□□ 0.4
NUP50-201ENST00000347635 RBM27Q9P2N5 1060 aaKnown RBP17.55■□□□□ 0.4
NUP50-201ENST00000347635 SDSP20132 328 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 CCDC183Q5T5S1 534 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 RAB11FIP3O75154 756 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 AMOTL1Q8IY63 956 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 VPS37DQ86XT2 251 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 HOMER1Q86YM7 354 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 A0A1W2PP64 1363 aa17.54■□□□□ 0.4
NUP50-201ENST00000347635 CASTP20810 708 aaKnown RBP17.53■□□□□ 0.4
NUP50-201ENST00000347635 MCM5P33992 734 aa17.53■□□□□ 0.4
NUP50-201ENST00000347635 RRAGDQ9NQL2 400 aaPredicted RBP17.53■□□□□ 0.4
NUP50-201ENST00000347635 CPLX2Q6PUV4 134 aaKnown RBP17.53■□□□□ 0.4
NUP50-201ENST00000347635 TOMM22Q9NS69 142 aa17.53■□□□□ 0.4
NUP50-201ENST00000347635 PDCL3Q9H2J4 239 aa17.53■□□□□ 0.4
NUP50-201ENST00000347635 TTC37Q6PGP7 1564 aa17.53■□□□□ 0.4
NUP50-201ENST00000347635 TAF7Q15545 349 aaPredicted RBP17.52■□□□□ 0.4
NUP50-201ENST00000347635 FBLN1P23142 703 aa17.52■□□□□ 0.4
NUP50-201ENST00000347635 NCBP3Q53F19 620 aaKnown RBP17.52■□□□□ 0.39
NUP50-201ENST00000347635 ANKRD44Q8N8A2 993 aa17.52■□□□□ 0.39
NUP50-201ENST00000347635 SIRT1Q96EB6 747 aa17.52■□□□□ 0.39
NUP50-201ENST00000347635 KIF1BPQ96EK5 621 aa17.52■□□□□ 0.39
NUP50-201ENST00000347635 VAMP4O75379 141 aa17.52■□□□□ 0.39
NUP50-201ENST00000347635 TRIM29Q14134 588 aa17.51■□□□□ 0.39
NUP50-201ENST00000347635 LRSAM1Q6UWE0 723 aa17.51■□□□□ 0.39
NUP50-201ENST00000347635 ZFYVE9O95405 1425 aa17.51■□□□□ 0.39
NUP50-201ENST00000347635 SF3B2Q13435 895 aaKnown RBP17.51■□□□□ 0.39
NUP50-201ENST00000347635 C8orf58Q8NAV2 365 aa17.51■□□□□ 0.39
NUP50-201ENST00000347635 KINO60870 393 aaKnown RBP17.51■□□□□ 0.39
NUP50-201ENST00000347635 NUP62CLQ9H1M0 184 aa17.51■□□□□ 0.39
NUP50-201ENST00000347635 PTPRTO14522 1441 aa17.51■□□□□ 0.39
NUP50-201ENST00000347635 STK3Q13188 491 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 AACSQ86V21 672 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 RBM33Q96EV2 1170 aaKnown RBP17.5■□□□□ 0.39
NUP50-201ENST00000347635 NEUROD6Q96NK8 337 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 STARD3NLO95772 234 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 DNAJC2Q99543 621 aaKnown RBP17.5■□□□□ 0.39
NUP50-201ENST00000347635 SDF4Q9BRK5 362 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 PDIA4P13667 645 aaKnown RBP17.5■□□□□ 0.39
NUP50-201ENST00000347635 SYNE3Q6ZMZ3 975 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 PHF23Q9BUL5 403 aaPredicted RBP17.5■□□□□ 0.39
NUP50-201ENST00000347635 TMEM2Q9UHN6 1383 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 YEATS2Q9ULM3 1422 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
NUP50-201ENST00000347635 KCNA6P17658 529 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 SPATA32Q96LK8 384 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 NPATQ14207 1427 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 BLOC1S2Q6QNY1 142 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 TSPYL6Q8N831 410 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 LRRFIP2Q9Y608 721 aaKnown RBP17.49■□□□□ 0.39
NUP50-201ENST00000347635 ZBTB7BO15156 539 aaPredicted RBP17.49■□□□□ 0.39
NUP50-201ENST00000347635 CCDC83Q8IWF9 413 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 DCTPP1Q9H773 170 aa17.49■□□□□ 0.39
NUP50-201ENST00000347635 TRDNQ13061 729 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 GOLGA6L1Q8N7Z2 621 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 POLKQ9UBT6 870 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 TRIM35Q9UPQ4 493 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 HECW2Q9P2P5 1572 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 ZNF396Q96N95 335 aaPredicted RBP17.48■□□□□ 0.39
NUP50-201ENST00000347635 C16orf71Q8IYS4 520 aaPredicted RBP17.48■□□□□ 0.39
NUP50-201ENST00000347635 MEIS3Q99687 375 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 GLRX3O76003 335 aaKnown RBP17.48■□□□□ 0.39
NUP50-201ENST00000347635 CREBRFQ8IUR6 639 aa17.48■□□□□ 0.39
NUP50-201ENST00000347635 CCAR2Q8N163 923 aaKnown RBP17.48■□□□□ 0.39
NUP50-201ENST00000347635 TNNT3P45378 269 aaPredicted RBP17.47■□□□□ 0.39
NUP50-201ENST00000347635 PLEKHM2Q8IWE5 1019 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 BCL11BQ9C0K0 894 aaPredicted RBP17.47■□□□□ 0.39
NUP50-201ENST00000347635 HOOK1Q9UJC3 728 aaKnown RBP17.47■□□□□ 0.39
NUP50-201ENST00000347635 ADCY10Q96PN6 1610 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 NCKAP5LQ9HCH0 1330 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 CEBPZQ03701 1054 aaKnown RBP17.47■□□□□ 0.39
NUP50-201ENST00000347635 FLIIQ13045 1269 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 MAP3K11Q16584 847 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 TMOD3Q9NYL9 352 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 LIMCH1Q9UPQ0 1083 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 TRPM1Q7Z4N2 1603 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 GDPD2Q9HCC8 539 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 USP25Q9UHP3 1055 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 LRRIQ1Q96JM4 1722 aa17.47■□□□□ 0.39
NUP50-201ENST00000347635 TSHZ3Q63HK5 1081 aa17.46■□□□□ 0.39
NUP50-201ENST00000347635 SIL1Q9H173 461 aa17.46■□□□□ 0.39
NUP50-201ENST00000347635 PDE1AP54750 535 aa17.46■□□□□ 0.39
NUP50-201ENST00000347635 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
NUP50-201ENST00000347635 ARGLU1Q9NWB6 273 aaPredicted RBP17.46■□□□□ 0.39
NUP50-201ENST00000347635 SH2B1Q9NRF2 756 aaPredicted RBP17.46■□□□□ 0.39
NUP50-201ENST00000347635 APPP05067 770 aa17.45■□□□□ 0.38
NUP50-201ENST00000347635 RALYLQ86SE5 291 aaKnown RBP17.45■□□□□ 0.38
NUP50-201ENST00000347635 IFNL2Q8IZJ0 200 aa17.45■□□□□ 0.38
NUP50-201ENST00000347635 MNS1Q8NEH6 495 aa17.45■□□□□ 0.38
NUP50-201ENST00000347635 CLASP1Q7Z460 1538 aa17.45■□□□□ 0.38
NUP50-201ENST00000347635 TEX35Q5T0J7 233 aa17.45■□□□□ 0.38
NUP50-201ENST00000347635 CCDC112Q8NEF3 446 aa17.45■□□□□ 0.38
NUP50-201ENST00000347635 RASSF8Q8NHQ8 419 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 ERCC6L2Q5T890 1561 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 EXOC5O00471 708 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 TPM1P09493 284 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 UVSSAQ2YD98 709 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 ANKRD24Q8TF21 1146 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 WASHC4Q2M389 1173 aa17.44■□□□□ 0.38
NUP50-201ENST00000347635 PHACTR3Q96KR7 559 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms