RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 CCER2I3L3R5 266 aa15.64■□□□□ 0.09
SNCA-202ENST00000345009 BAG6P46379 1132 aa15.64■□□□□ 0.09
SNCA-202ENST00000345009 SP7Q8TDD2 431 aaPredicted RBP15.64■□□□□ 0.09
SNCA-202ENST00000345009 RTF1Q92541 710 aaKnown RBP15.64■□□□□ 0.09
SNCA-202ENST00000345009 ACSBG1Q96GR2 724 aa15.64■□□□□ 0.09
SNCA-202ENST00000345009 PHACTR3Q96KR7 559 aa15.64■□□□□ 0.09
SNCA-202ENST00000345009 APBA3O96018 575 aa15.63■□□□□ 0.09
SNCA-202ENST00000345009 PRIM1P49642 420 aaKnown RBP15.63■□□□□ 0.09
SNCA-202ENST00000345009 PNISRQ8TF01 805 aaKnown RBP15.63■□□□□ 0.09
SNCA-202ENST00000345009 RUNDC1Q96C34 613 aa15.63■□□□□ 0.09
SNCA-202ENST00000345009 PLEKHF1Q96S99 279 aa15.62■□□□□ 0.09
SNCA-202ENST00000345009 PKD1L3Q7Z443 1732 aa15.61■□□□□ 0.09
SNCA-202ENST00000345009 HTATSF1O43719 755 aaKnown RBP15.61■□□□□ 0.09
SNCA-202ENST00000345009 HMGB2P26583 209 aaKnown RBP15.61■□□□□ 0.09
SNCA-202ENST00000345009 CABP4P57796 275 aa15.61■□□□□ 0.09
SNCA-202ENST00000345009 CCDC184Q52MB2 194 aa15.61■□□□□ 0.09
SNCA-202ENST00000345009 MPRIPQ6WCQ1 1025 aa15.61■□□□□ 0.09
SNCA-202ENST00000345009 TMOD3Q9NYL9 352 aa15.61■□□□□ 0.09
SNCA-202ENST00000345009 KCNQ2O43526 872 aa15.6■□□□□ 0.09
SNCA-202ENST00000345009 NFE2L2Q16236 605 aa15.6■□□□□ 0.09
SNCA-202ENST00000345009 MAP3K5Q99683 1374 aa15.6■□□□□ 0.09
SNCA-202ENST00000345009 PLSCR1O15162 318 aa15.59■□□□□ 0.09
SNCA-202ENST00000345009 LMOD3Q0VAK6 560 aa15.59■□□□□ 0.09
SNCA-202ENST00000345009 CCDC146Q8IYE0 955 aa15.59■□□□□ 0.09
SNCA-202ENST00000345009 SMARCC1Q92922 1105 aaPredicted RBP15.59■□□□□ 0.09
SNCA-202ENST00000345009 HAX1O00165 279 aa15.58■□□□□ 0.08
SNCA-202ENST00000345009 RNMTO43148 476 aaKnown RBP15.58■□□□□ 0.08
SNCA-202ENST00000345009 TEFQ10587 303 aa15.58■□□□□ 0.08
SNCA-202ENST00000345009 FAM9BQ8IZU0 186 aa15.58■□□□□ 0.08
SNCA-202ENST00000345009 CREBZFQ9NS37 354 aa15.58■□□□□ 0.08
SNCA-202ENST00000345009 RIPK4P57078 832 aa15.57■□□□□ 0.08
SNCA-202ENST00000345009 MIER1Q8N108 512 aa15.57■□□□□ 0.08
SNCA-202ENST00000345009 TMPOP42166 694 aaKnown RBP15.56■□□□□ 0.08
SNCA-202ENST00000345009 NFATC2IPQ8NCF5 419 aa15.56■□□□□ 0.08
SNCA-202ENST00000345009 PIGBQ92521 554 aa15.56■□□□□ 0.08
SNCA-202ENST00000345009 LGR6Q9HBX8 967 aa15.56■□□□□ 0.08
SNCA-202ENST00000345009 FBXO3Q9UK99 471 aa15.56■□□□□ 0.08
SNCA-202ENST00000345009 SHANK3Q9BYB0 1731 aa15.55■□□□□ 0.08
SNCA-202ENST00000345009 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
SNCA-202ENST00000345009 DEFB132Q7Z7B7 95 aa15.55■□□□□ 0.08
SNCA-202ENST00000345009 SLC52A2Q9HAB3 445 aa15.55■□□□□ 0.08
SNCA-202ENST00000345009 NEUROD2Q15784 382 aa15.54■□□□□ 0.08
SNCA-202ENST00000345009 PTF1AQ7RTS3 328 aa15.54■□□□□ 0.08
SNCA-202ENST00000345009 IL17REQ8NFR9 667 aa15.54■□□□□ 0.08
SNCA-202ENST00000345009 SBF2Q86WG5 1849 aa15.54■□□□□ 0.08
SNCA-202ENST00000345009 APAF1O14727 1248 aa15.53■□□□□ 0.08
SNCA-202ENST00000345009 CAMKK2Q96RR4 588 aa15.53■□□□□ 0.08
SNCA-202ENST00000345009 FARP1Q9Y4F1 1045 aaPredicted RBP15.53■□□□□ 0.08
SNCA-202ENST00000345009 KDM6AO15550 1401 aaPredicted RBP15.52■□□□□ 0.08
SNCA-202ENST00000345009 SLC27A3Q5K4L6 730 aa15.52■□□□□ 0.08
SNCA-202ENST00000345009 MCM10Q7L590 875 aa15.52■□□□□ 0.08
SNCA-202ENST00000345009 NGEFQ8N5V2 710 aa15.52■□□□□ 0.08
SNCA-202ENST00000345009 NHSQ6T4R5 1651 aa15.51■□□□□ 0.07
SNCA-202ENST00000345009 CALD1Q05682 793 aaKnown RBP15.51■□□□□ 0.07
SNCA-202ENST00000345009 TAF7Q15545 349 aaPredicted RBP15.51■□□□□ 0.07
SNCA-202ENST00000345009 EZH2Q15910 746 aaKnown RBP15.51■□□□□ 0.07
SNCA-202ENST00000345009 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
SNCA-202ENST00000345009 PLCD3Q8N3E9 789 aa15.51■□□□□ 0.07
SNCA-202ENST00000345009 RRP7AQ9Y3A4 280 aaKnown RBP15.51■□□□□ 0.07
SNCA-202ENST00000345009 CEMIPQ8WUJ3 1361 aa15.5■□□□□ 0.07
SNCA-202ENST00000345009 TXNRD1Q16881 649 aa15.5■□□□□ 0.07
SNCA-202ENST00000345009 NBPF14Q5TI25 921 aa15.5■□□□□ 0.07
SNCA-202ENST00000345009 ATG3Q9NT62 314 aa15.5■□□□□ 0.07
SNCA-202ENST00000345009 ASAP1Q9ULH1 1129 aa15.5■□□□□ 0.07
SNCA-202ENST00000345009 DOT1LQ8TEK3 1739 aa15.49■□□□□ 0.07
SNCA-202ENST00000345009 BTBD11A6QL63 1104 aa15.49■□□□□ 0.07
SNCA-202ENST00000345009 DCTN1Q14203 1278 aa15.49■□□□□ 0.07
SNCA-202ENST00000345009 CCNL1Q9UK58 526 aaPredicted RBP15.49■□□□□ 0.07
SNCA-202ENST00000345009 PALLDQ8WX93 1383 aa15.49■□□□□ 0.07
SNCA-202ENST00000345009 SCN11AQ9UI33 1791 aa15.47■□□□□ 0.07
SNCA-202ENST00000345009 LOC102724428A0A0B4J2F2 783 aa15.47■□□□□ 0.07
SNCA-202ENST00000345009 SIK1P57059 783 aa15.47■□□□□ 0.07
SNCA-202ENST00000345009 BABAM1Q9NWV8 329 aa15.47■□□□□ 0.07
SNCA-202ENST00000345009 BTAF1O14981 1849 aa15.47■□□□□ 0.07
SNCA-202ENST00000345009 TNS1Q9HBL0 1735 aaKnown RBP15.46■□□□□ 0.07
SNCA-202ENST00000345009 ITGB4P16144 1822 aa15.46■□□□□ 0.07
SNCA-202ENST00000345009 PTCD1O75127 700 aaKnown RBP15.46■□□□□ 0.07
SNCA-202ENST00000345009 CCDC27Q2M243 656 aa15.46■□□□□ 0.07
SNCA-202ENST00000345009 ZNF790Q6PG37 636 aa15.46■□□□□ 0.07
SNCA-202ENST00000345009 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
SNCA-202ENST00000345009 TRIM35Q9UPQ4 493 aa15.45■□□□□ 0.06
SNCA-202ENST00000345009 TOGARAM1Q9Y4F4 1720 aa15.44■□□□□ 0.06
SNCA-202ENST00000345009 SLC39A6Q13433 755 aa15.44■□□□□ 0.06
SNCA-202ENST00000345009 FMNL2Q96PY5 1086 aa15.44■□□□□ 0.06
SNCA-202ENST00000345009 THUMPD2Q9BTF0 503 aaKnown RBP15.44■□□□□ 0.06
SNCA-202ENST00000345009 TEX13AQ9BXU3 409 aaPredicted RBP15.44■□□□□ 0.06
SNCA-202ENST00000345009 STK32BQ9NY57 414 aa15.44■□□□□ 0.06
SNCA-202ENST00000345009 MRC1P22897 1456 aa15.44■□□□□ 0.06
SNCA-202ENST00000345009 VSIG10Q8N0Z9 540 aa15.43■□□□□ 0.06
SNCA-202ENST00000345009 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
SNCA-202ENST00000345009 ADAMTS7Q9UKP4 1686 aa15.43■□□□□ 0.06
SNCA-202ENST00000345009 RGPD3A6NKT7 1758 aaPredicted RBP15.42■□□□□ 0.06
SNCA-202ENST00000345009 RGPD4Q7Z3J3 1758 aa15.42■□□□□ 0.06
SNCA-202ENST00000345009 GNAI1P63096 354 aa15.42■□□□□ 0.06
SNCA-202ENST00000345009 LAS1LQ9Y4W2 734 aaKnown RBP15.42■□□□□ 0.06
SNCA-202ENST00000345009 DLG5Q8TDM6 1919 aa15.41■□□□□ 0.06
SNCA-202ENST00000345009 STARD3NLO95772 234 aa15.41■□□□□ 0.06
SNCA-202ENST00000345009 WDR63Q8IWG1 891 aa15.41■□□□□ 0.06
SNCA-202ENST00000345009 WWC1Q8IX03 1113 aa15.41■□□□□ 0.06
SNCA-202ENST00000345009 CFAP44Q96MT7 982 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms