RNA–Protein interactions for RNA: ENST00000344780.4

SNX21-202, Transcript of sorting nexin family member 21, humanhuman

TSL 2

Gene SNX21, Length 3,106 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-202ENST00000344780 PTPRUQ92729 1446 aa16.31■□□□□ 0.2
SNX21-202ENST00000344780 MAP4K4O95819 1239 aaPredicted RBP16.31■□□□□ 0.2
SNX21-202ENST00000344780 JARID2Q92833 1246 aaPredicted RBP16.31■□□□□ 0.2
SNX21-202ENST00000344780 PIK3R4Q99570 1358 aa16.31■□□□□ 0.2
SNX21-202ENST00000344780 ANKRD26Q9UPS8 1709 aa16.31■□□□□ 0.2
SNX21-202ENST00000344780 ANO2Q9NQ90 1003 aa16.3■□□□□ 0.2
SNX21-202ENST00000344780 RTL1A6NKG5 1358 aa16.3■□□□□ 0.2
SNX21-202ENST00000344780 REC8O95072 547 aa16.3■□□□□ 0.2
SNX21-202ENST00000344780 MPNDQ8N594 471 aa16.3■□□□□ 0.2
SNX21-202ENST00000344780 IL1RAPL2Q9NP60 686 aa16.3■□□□□ 0.2
SNX21-202ENST00000344780 NASPP49321 788 aaPredicted RBP16.3■□□□□ 0.2
SNX21-202ENST00000344780 USP6P35125 1406 aa16.29■□□□□ 0.2
SNX21-202ENST00000344780 NRXN3Q9Y4C0 1643 aa16.29■□□□□ 0.2
SNX21-202ENST00000344780 ESCO1Q5FWF5 840 aa16.29■□□□□ 0.2
SNX21-202ENST00000344780 LRRC59Q96AG4 307 aaKnown RBP16.29■□□□□ 0.2
SNX21-202ENST00000344780 PHAXQ9H814 394 aaKnown RBP16.29■□□□□ 0.2
SNX21-202ENST00000344780 NCOA3Q9Y6Q9 1424 aa16.29■□□□□ 0.2
SNX21-202ENST00000344780 DLC1Q96QB1 1528 aa16.28■□□□□ 0.2
SNX21-202ENST00000344780 ERC2O15083 957 aa16.28■□□□□ 0.2
SNX21-202ENST00000344780 RBM27Q9P2N5 1060 aaKnown RBP16.28■□□□□ 0.2
SNX21-202ENST00000344780 DTNBO60941 627 aa16.28■□□□□ 0.2
SNX21-202ENST00000344780 GNAI2P04899 355 aa16.28■□□□□ 0.2
SNX21-202ENST00000344780 PDE1AP54750 535 aa16.28■□□□□ 0.2
SNX21-202ENST00000344780 PNMA6EA0A0J9YXQ4 647 aa16.27■□□□□ 0.2
SNX21-202ENST00000344780 NUCB2P80303 420 aa16.27■□□□□ 0.2
SNX21-202ENST00000344780 IL17REQ8NFR9 667 aa16.27■□□□□ 0.2
SNX21-202ENST00000344780 UPF3BQ9BZI7 483 aaKnown RBP16.27■□□□□ 0.2
SNX21-202ENST00000344780 DLG5Q8TDM6 1919 aa16.27■□□□□ 0.2
SNX21-202ENST00000344780 CDC42BPGQ6DT37 1551 aa16.27■□□□□ 0.2
SNX21-202ENST00000344780 AGLP35573 1532 aa16.27■□□□□ 0.19
SNX21-202ENST00000344780 FLIIQ13045 1269 aa16.27■□□□□ 0.19
SNX21-202ENST00000344780 TSC1Q92574 1164 aa16.27■□□□□ 0.19
SNX21-202ENST00000344780 PTPRCP08575 1304 aa16.27■□□□□ 0.19
SNX21-202ENST00000344780 FAM177BA6PVY3 158 aa16.26■□□□□ 0.19
SNX21-202ENST00000344780 KCNQ3O43525 872 aa16.26■□□□□ 0.19
SNX21-202ENST00000344780 THEMISQ8N1K5 641 aaPredicted RBP16.26■□□□□ 0.19
SNX21-202ENST00000344780 LGR6Q9HBX8 967 aa16.26■□□□□ 0.19
SNX21-202ENST00000344780 GNAT3A8MTJ3 354 aa16.26■□□□□ 0.19
SNX21-202ENST00000344780 HOXC9P31274 260 aa16.26■□□□□ 0.19
SNX21-202ENST00000344780 LRRFIP2Q9Y608 721 aaKnown RBP16.26■□□□□ 0.19
SNX21-202ENST00000344780 PSME1Q06323 249 aa16.25■□□□□ 0.19
SNX21-202ENST00000344780 SIRT1Q96EB6 747 aa16.25■□□□□ 0.19
SNX21-202ENST00000344780 LRRCC1Q9C099 1032 aa16.25■□□□□ 0.19
SNX21-202ENST00000344780 CCT4P50991 539 aaKnown RBP16.24■□□□□ 0.19
SNX21-202ENST00000344780 MPRIPQ6WCQ1 1025 aa16.24■□□□□ 0.19
SNX21-202ENST00000344780 NUTM1Q86Y26 1132 aa16.24■□□□□ 0.19
SNX21-202ENST00000344780 LARP6Q9BRS8 491 aaKnown RBP16.24■□□□□ 0.19
SNX21-202ENST00000344780 ATP10DQ9P241 1426 aa16.24■□□□□ 0.19
SNX21-202ENST00000344780 PTMSP20962 102 aa16.24■□□□□ 0.19
SNX21-202ENST00000344780 KLHL40Q2TBA0 621 aa16.24■□□□□ 0.19
SNX21-202ENST00000344780 HDGFL1Q5TGJ6 251 aa16.24■□□□□ 0.19
SNX21-202ENST00000344780 RIMS1Q86UR5 1692 aaKnown RBP16.23■□□□□ 0.19
SNX21-202ENST00000344780 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.23■□□□□ 0.19
SNX21-202ENST00000344780 FLT4P35916 1363 aa16.23■□□□□ 0.19
SNX21-202ENST00000344780 RNF214Q8ND24 703 aa16.23■□□□□ 0.19
SNX21-202ENST00000344780 ZBTB22O15209 634 aa16.23■□□□□ 0.19
SNX21-202ENST00000344780 PDIA4P13667 645 aaKnown RBP16.23■□□□□ 0.19
SNX21-202ENST00000344780 MX1P20591 662 aa16.22■□□□□ 0.19
SNX21-202ENST00000344780 PAXIP1Q6ZW49 1069 aaPredicted RBP16.22■□□□□ 0.19
SNX21-202ENST00000344780 OVOS2A0A0J9YW53 1432 aa16.22■□□□□ 0.19
SNX21-202ENST00000344780 OVOS2Q6IE36 1432 aa16.22■□□□□ 0.19
SNX21-202ENST00000344780 SETD1AO15047 1707 aaKnown RBP16.22■□□□□ 0.19
SNX21-202ENST00000344780 PALD1Q9ULE6 856 aa16.22■□□□□ 0.19
SNX21-202ENST00000344780 PLEKHG1Q9ULL1 1385 aa16.22■□□□□ 0.19
SNX21-202ENST00000344780 CCDC30Q5VVM6 783 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 NBPF6Q5VWK0 638 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 NBPF4Q96M43 638 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 GDPD2Q9HCC8 539 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 TBX22Q9Y458 520 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 MSNP26038 577 aaKnown RBP16.21■□□□□ 0.19
SNX21-202ENST00000344780 ZSCAN23Q3MJ62 389 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 TMX3Q96JJ7 454 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 LMBRD1Q9NUN5 540 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 CRB1P82279 1406 aa16.21■□□□□ 0.19
SNX21-202ENST00000344780 SURF6O75683 361 aaKnown RBP16.21■□□□□ 0.18
SNX21-202ENST00000344780 PHF8Q9UPP1 1060 aa16.21■□□□□ 0.18
SNX21-202ENST00000344780 UBTFL1P0CB47 393 aaPredicted RBP16.2■□□□□ 0.18
SNX21-202ENST00000344780 MCCP23508 829 aa16.2■□□□□ 0.18
SNX21-202ENST00000344780 UNC5CLQ8IV45 518 aa16.2■□□□□ 0.18
SNX21-202ENST00000344780 ISY1Q9ULR0 285 aaKnown RBP16.2■□□□□ 0.18
SNX21-202ENST00000344780 NAP1L2Q9ULW6 460 aaPredicted RBP16.2■□□□□ 0.18
SNX21-202ENST00000344780 RGS12O14924 1447 aa16.2■□□□□ 0.18
SNX21-202ENST00000344780 TPM2P07951 284 aa16.2■□□□□ 0.18
SNX21-202ENST00000344780 PRIM1P49642 420 aaKnown RBP16.2■□□□□ 0.18
SNX21-202ENST00000344780 ORAI2Q96SN7 254 aa16.2■□□□□ 0.18
SNX21-202ENST00000344780 KNDC1Q76NI1 1749 aa16.2■□□□□ 0.18
SNX21-202ENST00000344780 CEP170BQ9Y4F5 1589 aaPredicted RBP16.19■□□□□ 0.18
SNX21-202ENST00000344780 SYCE3A1L190 88 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 GNAI3P08754 354 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 CBX1P83916 185 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 SBNO1A3KN83 1393 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 UQCRHLA0A096LP55 91 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 UQCRHP07919 91 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 AIMP1Q12904 312 aaKnown RBP16.19■□□□□ 0.18
SNX21-202ENST00000344780 OS9Q13438 667 aaPredicted RBP16.19■□□□□ 0.18
SNX21-202ENST00000344780 TAF7Q15545 349 aaPredicted RBP16.19■□□□□ 0.18
SNX21-202ENST00000344780 KIAA0232Q92628 1395 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 ESYT1Q9BSJ8 1104 aa16.19■□□□□ 0.18
SNX21-202ENST00000344780 CWC22Q9HCG8 908 aaKnown RBP16.19■□□□□ 0.18
SNX21-202ENST00000344780 TECPR2O15040 1411 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms