RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 PLEKHH1Q9ULM0 1364 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 RLBP1P12271 317 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 ZSCAN23Q3MJ62 389 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 RBM27Q9P2N5 1060 aaKnown RBP9.51□□□□□ -0.89
UBE4B-202ENST00000343090 ZKSCAN5Q9Y2L8 839 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 NUP153P49790 1475 aaKnown RBP9.51□□□□□ -0.89
UBE4B-202ENST00000343090 CALCOCO1Q9P1Z2 691 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 TCEAL9Q9UHQ7 104 aa9.51□□□□□ -0.89
UBE4B-202ENST00000343090 PTCD1O75127 700 aaKnown RBP9.5□□□□□ -0.89
UBE4B-202ENST00000343090 PDIA4P13667 645 aaKnown RBP9.5□□□□□ -0.89
UBE4B-202ENST00000343090 CEBPAP49715 358 aaPredicted RBP9.5□□□□□ -0.89
UBE4B-202ENST00000343090 FLIIQ13045 1269 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 BMP2KLQ5H9B9 411 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 MYD88Q99836 296 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 GLRX3O76003 335 aaKnown RBP9.5□□□□□ -0.89
UBE4B-202ENST00000343090 BAG4O95429 457 aaKnown RBP9.5□□□□□ -0.89
UBE4B-202ENST00000343090 TESK2Q96S53 571 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 CEP126Q9P2H0 1117 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 PPP6R1Q9UPN7 881 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 FANCAO15360 1455 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 ANXA1P04083 346 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 ANKLE2Q86XL3 938 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 ASXL1Q8IXJ9 1541 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 RAPGEF6Q8TEU7 1601 aa9.5□□□□□ -0.89
UBE4B-202ENST00000343090 VGLL3A8MV65 326 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 TSPYL1Q9H0U9 437 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 PRDM11Q9NQV5 511 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 CCDC69A6NI79 296 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 ATP10BO94823 1461 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 GUCY1B3Q02153 619 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 NUCB1Q02818 461 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 PIBF1Q8WXW3 757 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 RAB11FIP3O75154 756 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 IDH1O75874 414 aaKnown RBP9.49□□□□□ -0.89
UBE4B-202ENST00000343090 CAGE1Q8TC20 777 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 PATL2C9JE40 543 aaKnown RBP9.49□□□□□ -0.89
UBE4B-202ENST00000343090 PPFIA3O75145 1194 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 MAP3K11Q16584 847 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 TTC22Q5TAA0 569 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 DNAAF4Q8WXU2 420 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 TIGD1Q96MW7 591 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 ZRANB1Q9UGI0 708 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 AMOTL2Q9Y2J4 779 aa9.49□□□□□ -0.89
UBE4B-202ENST00000343090 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
UBE4B-202ENST00000343090 C16orf71Q8IYS4 520 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-202ENST00000343090 MEIS3Q99687 375 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 DHX29Q7Z478 1369 aaKnown RBP9.48□□□□□ -0.89
UBE4B-202ENST00000343090 ZNF830Q96NB3 372 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-202ENST00000343090 USP25Q9UHP3 1055 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 JMYQ8N9B5 988 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 JARID2Q92833 1246 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-202ENST00000343090 CARD14Q9BXL6 1004 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 CFAP45Q9UL16 551 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 TRIM22Q8IYM9 498 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 C8orf58Q8NAV2 365 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 MPHOSPH8Q99549 860 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 CTDP1Q9Y5B0 961 aaPredicted RBP9.48□□□□□ -0.89
UBE4B-202ENST00000343090 SYCP2Q9BX26 1530 aa9.48□□□□□ -0.89
UBE4B-202ENST00000343090 FOXO3O43524 673 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 KRT32Q14532 448 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 CKAP2LQ8IYA6 745 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 HDAC1Q13547 482 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-202ENST00000343090 HS1BP3Q53T59 392 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 HSP90B2PQ58FF3 399 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 NSD2O96028 1365 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 SDSP20132 328 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 IKQ13123 557 aaPredicted RBP9.47□□□□□ -0.89
UBE4B-202ENST00000343090 FILIP1LQ4L180 1135 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 HSP90AB2PQ58FF8 381 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 PTPRCP08575 1304 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 KIF20AO95235 890 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 TDO2P48775 406 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 LEKR1Q6ZMV7 388 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 CEP57L1Q8IYX8 460 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 RUFY1Q96T51 708 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 NACAP1Q9BZK3 213 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 KDM5BQ9UGL1 1544 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 TERF1P54274 439 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 PPP1R42Q7Z4L9 355 aa9.47□□□□□ -0.89
UBE4B-202ENST00000343090 TFIP11Q9UBB9 837 aaKnown RBP9.47□□□□□ -0.89
UBE4B-202ENST00000343090 KDM2BQ8NHM5 1336 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 EPS15P42566 896 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 NOLC1Q14978 699 aaKnown RBP eCLIP9.46□□□□□ -0.89
UBE4B-202ENST00000343090 LIMCH1Q9UPQ0 1083 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 ACEP12821 1306 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 ANKRD36BQ8N2N9 1353 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 CCDC183Q5T5S1 534 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 TSPYL6Q8N831 410 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 AK7Q96M32 723 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 MAP3K2Q9Y2U5 619 aa9.46□□□□□ -0.89
UBE4B-202ENST00000343090 IRX3P78415 501 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 LARP1Q6PKG0 1096 aaKnown RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 KCNH5Q8NCM2 988 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 CCDC43Q96MW1 224 aaKnown RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 NOL7Q9UMY1 257 aaKnown RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 IL16Q14005 1332 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 PI4KAP2A4QPH2 592 aa9.46□□□□□ -0.9
UBE4B-202ENST00000343090 NUTM2BA6NNL0 878 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 NUTM2EB1AL46 878 aaPredicted RBP9.46□□□□□ -0.9
UBE4B-202ENST00000343090 PER1O15534 1290 aaPredicted RBP9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 140.5 ms