RNA–Protein interactions for RNA: ENST00000342740.5

CARMIL3-201, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CARMIL3, Length 4,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-201ENST00000342740 MAST1Q9Y2H9 1570 aa18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 EXOC5O00471 708 aa18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 MCM4P33991 863 aa18.59■□□□□ 0.57
CARMIL3-201ENST00000342740 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
CARMIL3-201ENST00000342740 KINO60870 393 aaKnown RBP18.58■□□□□ 0.57
CARMIL3-201ENST00000342740 IGHMBP2P38935 993 aaKnown RBP18.58■□□□□ 0.57
CARMIL3-201ENST00000342740 BMP2KLQ5H9B9 411 aa18.58■□□□□ 0.57
CARMIL3-201ENST00000342740 STK11IPQ8N1F8 1099 aa18.58■□□□□ 0.57
CARMIL3-201ENST00000342740 SAMD1Q6SPF0 538 aaPredicted RBP18.58■□□□□ 0.56
CARMIL3-201ENST00000342740 ZBTB3Q9H5J0 574 aa18.58■□□□□ 0.56
CARMIL3-201ENST00000342740 HDAC1Q13547 482 aaPredicted RBP18.58■□□□□ 0.56
CARMIL3-201ENST00000342740 ZSCAN31Q96LW9 406 aaPredicted RBP18.58■□□□□ 0.56
CARMIL3-201ENST00000342740 ABCC1P33527 1531 aa18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 MTHFSDQ2M296 383 aaKnown RBP18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 PPP1R42Q7Z4L9 355 aa18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 MEIS3Q99687 375 aa18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 NPHP3Q7Z494 1330 aa18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 AKAP2Q9Y2D5 859 aa18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 FLT4P35916 1363 aa18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 SPINK5Q9NQ38 1064 aaPredicted RBP18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 CASTP20810 708 aaKnown RBP18.57■□□□□ 0.56
CARMIL3-201ENST00000342740 STK38Q15208 465 aa18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 ZNF396Q96N95 335 aaPredicted RBP18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 ATP10AO60312 1499 aa18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 IFIT5Q13325 482 aaKnown RBP18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 LRP2BPQ9P2M1 347 aa18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 ATP5J2-PTCD1G3V325 749 aa18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 LETM1O95202 739 aaPredicted RBP18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 SNRPA1P09661 255 aaKnown RBP18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 MRPL50Q8N5N7 158 aaKnown RBP18.56■□□□□ 0.56
CARMIL3-201ENST00000342740 MSH6P52701 1360 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 KRT85P78386 507 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 TCEAL9Q9UHQ7 104 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 NPC1L1Q9UHC9 1359 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 MBD5Q9P267 1494 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 VAMP4O75379 141 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 PRPF40BQ6NWY9 871 aaKnown RBP18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 TSPYL6Q8N831 410 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 ZNF592Q92610 1267 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 EYA1Q99502 592 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 NAT10Q9H0A0 1025 aaKnown RBP18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 C19orf44Q9H6X5 657 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 TNNQ9UQP3 1299 aa18.55■□□□□ 0.56
CARMIL3-201ENST00000342740 IFIT1P09914 478 aaKnown RBP18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 UBE3BQ7Z3V4 1068 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 PCMTD1Q96MG8 357 aaPredicted RBP18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 TRMT112Q9UI30 125 aaKnown RBP18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 ZNF652Q9Y2D9 606 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 TBC1D9Q6ZT07 1266 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 RAI14Q9P0K7 980 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 MAP3K19Q56UN5 1328 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 TRIM22Q8IYM9 498 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 LRRC59Q96AG4 307 aaKnown RBP18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 ECHDC1Q9NTX5 307 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 CHPF2Q9P2E5 772 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 ABCF2Q9UG63 623 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 TDO2P48775 406 aa18.54■□□□□ 0.56
CARMIL3-201ENST00000342740 RLBP1P12271 317 aa18.53■□□□□ 0.56
CARMIL3-201ENST00000342740 HSP90AB3PQ58FF7 597 aa18.53■□□□□ 0.56
CARMIL3-201ENST00000342740 TBC1D2Q9BYX2 928 aa18.53■□□□□ 0.56
CARMIL3-201ENST00000342740 AKAP4Q5JQC9 854 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 ANKRD13DQ6ZTN6 518 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 NGLY1Q96IV0 654 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 IPO7O95373 1038 aaKnown RBP18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 GCP02774 474 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 GPTP24298 496 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 NUCB1Q02818 461 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 NOC3LQ8WTT2 800 aaKnown RBP18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 TSPY26PQ9H489 355 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 IKQ13123 557 aaPredicted RBP18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 SLC39A6Q13433 755 aa18.52■□□□□ 0.56
CARMIL3-201ENST00000342740 ZFYVE9O95405 1425 aa18.52■□□□□ 0.55
CARMIL3-201ENST00000342740 KRT24Q2M2I5 525 aa18.52■□□□□ 0.55
CARMIL3-201ENST00000342740 OLFM4Q6UX06 510 aa18.52■□□□□ 0.55
CARMIL3-201ENST00000342740 AIDAQ96BJ3 306 aa18.52■□□□□ 0.55
CARMIL3-201ENST00000342740 TEX13AQ9BXU3 409 aaPredicted RBP18.52■□□□□ 0.55
CARMIL3-201ENST00000342740 RSPH6AQ9H0K4 717 aa18.52■□□□□ 0.55
CARMIL3-201ENST00000342740 CCDC69A6NI79 296 aa18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 TSHZ3Q63HK5 1081 aa18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 CCAR2Q8N163 923 aaKnown RBP18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 FAM43AQ8N2R8 423 aa18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 IMMTQ16891 758 aaKnown RBP18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 CABLES1Q8TDN4 633 aa18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 NUP133Q8WUM0 1156 aa18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 U3KPZ7 1027 aaPredicted RBP18.51■□□□□ 0.55
CARMIL3-201ENST00000342740 ANKRD44Q8N8A2 993 aa18.5■□□□□ 0.55
CARMIL3-201ENST00000342740 JMYQ8N9B5 988 aa18.5■□□□□ 0.55
CARMIL3-201ENST00000342740 ME1P48163 572 aa18.5■□□□□ 0.55
CARMIL3-201ENST00000342740 HOMER1Q86YM7 354 aa18.5■□□□□ 0.55
CARMIL3-201ENST00000342740 TRIM5Q9C035 493 aa18.5■□□□□ 0.55
CARMIL3-201ENST00000342740 ZCRB1Q8TBF4 217 aaKnown RBP18.5■□□□□ 0.55
CARMIL3-201ENST00000342740 TTC22Q5TAA0 569 aa18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 CWC25Q9NXE8 425 aaPredicted RBP18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 UBAC1Q9BSL1 405 aa18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 RHPN1Q8TCX5 695 aa18.49■□□□□ 0.55
CARMIL3-201ENST00000342740 CEP89Q96ST8 783 aa18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms