RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 SRCIN1Q9C0H9 1055 aa22.09■■□□□ 1.13
SMPD1-201ENST00000342245 SSH2Q76I76 1423 aa22.09■■□□□ 1.13
SMPD1-201ENST00000342245 MUM1L1Q5H9M0 696 aa22.09■■□□□ 1.13
SMPD1-201ENST00000342245 RPAP2Q8IXW5 612 aaPredicted RBP22.09■■□□□ 1.13
SMPD1-201ENST00000342245 DEPDC5O75140 1603 aa22.09■■□□□ 1.13
SMPD1-201ENST00000342245 FAM135BQ49AJ0 1406 aa22.09■■□□□ 1.13
SMPD1-201ENST00000342245 NEMFO60524 1076 aa22.08■■□□□ 1.13
SMPD1-201ENST00000342245 RAD51AP2Q09MP3 1159 aa22.08■■□□□ 1.13
SMPD1-201ENST00000342245 CFAP70Q5T0N1 1121 aa22.08■■□□□ 1.13
SMPD1-201ENST00000342245 EPB41L2O43491 1005 aaKnown RBP22.08■■□□□ 1.13
SMPD1-201ENST00000342245 CCDC186Q7Z3E2 898 aa22.08■■□□□ 1.13
SMPD1-201ENST00000342245 TXLNBQ8N3L3 684 aa22.08■■□□□ 1.13
SMPD1-201ENST00000342245 SECISBP2LQ93073 1101 aaKnown RBP22.08■■□□□ 1.13
SMPD1-201ENST00000342245 ANKRD44Q8N8A2 993 aa22.07■■□□□ 1.12
SMPD1-201ENST00000342245 SLC12A5Q9H2X9 1139 aa22.07■■□□□ 1.12
SMPD1-201ENST00000342245 COL3A1P02461 1466 aaPredicted RBP22.07■■□□□ 1.12
SMPD1-201ENST00000342245 U2SURPO15042 1029 aaKnown RBP22.07■■□□□ 1.12
SMPD1-201ENST00000342245 ZSCAN22P10073 491 aaPredicted RBP22.07■■□□□ 1.12
SMPD1-201ENST00000342245 RBM6P78332 1123 aaKnown RBP22.07■■□□□ 1.12
SMPD1-201ENST00000342245 TET3O43151 1660 aa22.07■■□□□ 1.12
SMPD1-201ENST00000342245 VAMP4O75379 141 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 ZSCAN25Q6NSZ9 544 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 OSBPL3Q9H4L5 887 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 CNPY2Q9Y2B0 182 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 ABCA9Q8IUA7 1624 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 KIF2AO00139 706 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-201ENST00000342245 GIMAP6Q6P9H5 292 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.06■■□□□ 1.12
SMPD1-201ENST00000342245 UGGT1Q9NYU2 1555 aa22.06■■□□□ 1.12
SMPD1-201ENST00000342245 KNDC1Q76NI1 1749 aa22.05■■□□□ 1.12
SMPD1-201ENST00000342245 NAA30Q147X3 362 aaPredicted RBP22.05■■□□□ 1.12
SMPD1-201ENST00000342245 RASSF4Q9H2L5 321 aa22.05■■□□□ 1.12
SMPD1-201ENST00000342245 QRICH2Q9H0J4 1663 aa22.05■■□□□ 1.12
SMPD1-201ENST00000342245 TCHHQ07283 1943 aa22.05■■□□□ 1.12
SMPD1-201ENST00000342245 FBXO38Q6PIJ6 1188 aa22.05■■□□□ 1.12
SMPD1-201ENST00000342245 DRC7Q8IY82 874 aa22.05■■□□□ 1.12
SMPD1-201ENST00000342245 C16orf71Q8IYS4 520 aaPredicted RBP22.04■■□□□ 1.12
SMPD1-201ENST00000342245 NRXN1Q9ULB1 1477 aa22.04■■□□□ 1.12
SMPD1-201ENST00000342245 IFT172Q9UG01 1749 aa22.04■■□□□ 1.12
SMPD1-201ENST00000342245 VWDEQ8N2E2 1590 aa22.04■■□□□ 1.12
SMPD1-201ENST00000342245 SLU7O95391 586 aaKnown RBP22.03■■□□□ 1.12
SMPD1-201ENST00000342245 CDC25BP30305 580 aa22.03■■□□□ 1.12
SMPD1-201ENST00000342245 TPM4P67936 248 aa22.03■■□□□ 1.12
SMPD1-201ENST00000342245 CERS3Q8IU89 383 aa22.03■■□□□ 1.12
SMPD1-201ENST00000342245 ZNF215Q9UL58 517 aaPredicted RBP22.03■■□□□ 1.12
SMPD1-201ENST00000342245 PLA2G4DQ86XP0 818 aa22.02■■□□□ 1.12
SMPD1-201ENST00000342245 AEBP1Q8IUX7 1158 aa22.02■■□□□ 1.12
SMPD1-201ENST00000342245 ADGRF5Q8IZF2 1346 aa22.02■■□□□ 1.12
SMPD1-201ENST00000342245 FOXD4L6Q3SYB3 417 aaPredicted RBP22.02■■□□□ 1.12
SMPD1-201ENST00000342245 FOXD4L3Q6VB84 417 aaPredicted RBP22.02■■□□□ 1.12
SMPD1-201ENST00000342245 PTPN14Q15678 1187 aa22.01■■□□□ 1.11
SMPD1-201ENST00000342245 AEBP2Q6ZN18 517 aaPredicted RBP22.01■■□□□ 1.11
SMPD1-201ENST00000342245 NOP2P46087 812 aaKnown RBP22.01■■□□□ 1.11
SMPD1-201ENST00000342245 ZNF75DP51815 510 aa22.01■■□□□ 1.11
SMPD1-201ENST00000342245 ESYT1Q9BSJ8 1104 aa22.01■■□□□ 1.11
SMPD1-201ENST00000342245 ASXL2Q76L83 1435 aa22■■□□□ 1.11
SMPD1-201ENST00000342245 CWC15Q9P013 229 aaKnown RBP22■■□□□ 1.11
SMPD1-201ENST00000342245 F13A1P00488 732 aa22■■□□□ 1.11
SMPD1-201ENST00000342245 GPS2Q13227 327 aa22■■□□□ 1.11
SMPD1-201ENST00000342245 MROH1Q8NDA8 1641 aa22■■□□□ 1.11
SMPD1-201ENST00000342245 STX6O43752 255 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 H2AFXP16104 143 aaPredicted RBP21.99■■□□□ 1.11
SMPD1-201ENST00000342245 LRMPQ12912 555 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 MAP3K11Q16584 847 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 NYAP1Q6ZVC0 841 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 KCND1Q9NSA2 647 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 RSPH14Q9UHP6 348 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 GNAI1P63096 354 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 ATP10DQ9P241 1426 aa21.99■■□□□ 1.11
SMPD1-201ENST00000342245 CAVIN2O95810 425 aa21.98■■□□□ 1.11
SMPD1-201ENST00000342245 ZNF592Q92610 1267 aa21.98■■□□□ 1.11
SMPD1-201ENST00000342245 KIF1BO60333 1816 aa21.98■■□□□ 1.11
SMPD1-201ENST00000342245 ELF2Q15723 593 aa21.98■■□□□ 1.11
SMPD1-201ENST00000342245 OTUD7AQ8TE49 926 aaPredicted RBP21.98■■□□□ 1.11
SMPD1-201ENST00000342245 TRIM5Q9C035 493 aa21.98■■□□□ 1.11
SMPD1-201ENST00000342245 ELP1O95163 1332 aa21.97■■□□□ 1.11
SMPD1-201ENST00000342245 RAD50Q92878 1312 aa21.97■■□□□ 1.11
SMPD1-201ENST00000342245 CDC42BPGQ6DT37 1551 aa21.97■■□□□ 1.11
SMPD1-201ENST00000342245 FCHSD2O94868 740 aa21.97■■□□□ 1.11
SMPD1-201ENST00000342245 V9GYY5 206 aaPredicted RBP21.97■■□□□ 1.11
SMPD1-201ENST00000342245 ATP8B1O43520 1251 aa21.97■■□□□ 1.11
SMPD1-201ENST00000342245 TDRD7Q8NHU6 1098 aaKnown RBP21.97■■□□□ 1.11
SMPD1-201ENST00000342245 TRERF1Q96PN7 1200 aa21.97■■□□□ 1.11
SMPD1-201ENST00000342245 TUBB4AP04350 444 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 BRD2P25440 801 aaKnown RBP21.96■■□□□ 1.11
SMPD1-201ENST00000342245 TYRO3Q06418 890 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 BRMS1Q9HCU9 246 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 ZNF446Q9NWS9 450 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 FIBPO43427 364 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 RTF1Q92541 710 aaKnown RBP21.96■■□□□ 1.11
SMPD1-201ENST00000342245 ST7Q9NRC1 585 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 MRVI1Q9Y6F6 885 aa21.96■■□□□ 1.11
SMPD1-201ENST00000342245 AXDND1Q5T1B0 1012 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-201ENST00000342245 ARGLU1Q9NWB6 273 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-201ENST00000342245 RNF216Q9NWF9 866 aaPredicted RBP21.95■■□□□ 1.1
SMPD1-201ENST00000342245 DHX16O60231 1041 aaKnown RBP21.95■■□□□ 1.1
SMPD1-201ENST00000342245 HMMRO75330 724 aa21.95■■□□□ 1.1
SMPD1-201ENST00000342245 CEP85Q6P2H3 762 aa21.95■■□□□ 1.1
SMPD1-201ENST00000342245 NUP62CLQ9H1M0 184 aa21.95■■□□□ 1.1
SMPD1-201ENST00000342245 CLIP2Q9UDT6 1046 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms