RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 NSD3Q9BZ95 1437 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 IFT140Q96RY7 1462 aa17.81■□□□□ 0.44
COL11A2-201ENST00000341947 DDX11Q96FC9 970 aa17.8■□□□□ 0.44
COL11A2-201ENST00000341947 PLCD4Q9BRC7 762 aa17.8■□□□□ 0.44
COL11A2-201ENST00000341947 LRRFIP2Q9Y608 721 aaKnown RBP17.8■□□□□ 0.44
COL11A2-201ENST00000341947 MINDY4BA8MYZ0 360 aa17.8■□□□□ 0.44
COL11A2-201ENST00000341947 DUSP27Q5VZP5 1158 aa17.8■□□□□ 0.44
COL11A2-201ENST00000341947 MYD88Q99836 296 aa17.8■□□□□ 0.44
COL11A2-201ENST00000341947 TSG101Q99816 390 aa17.8■□□□□ 0.44
COL11A2-201ENST00000341947 PTCD1O75127 700 aaKnown RBP17.8■□□□□ 0.44
COL11A2-201ENST00000341947 TROQ12816 1431 aaPredicted RBP17.79■□□□□ 0.44
COL11A2-201ENST00000341947 FAM193AP78312 1265 aa17.79■□□□□ 0.44
COL11A2-201ENST00000341947 CCDC97Q96F63 343 aaPredicted RBP17.79■□□□□ 0.44
COL11A2-201ENST00000341947 CUL5Q93034 780 aa17.79■□□□□ 0.44
COL11A2-201ENST00000341947 CCDC61Q9Y6R9 512 aa17.79■□□□□ 0.44
COL11A2-201ENST00000341947 GLRX3O76003 335 aaKnown RBP17.78■□□□□ 0.44
COL11A2-201ENST00000341947 NAPBQ9H115 298 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 SLC5A1P13866 664 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 TMPOP42166 694 aaKnown RBP17.78■□□□□ 0.44
COL11A2-201ENST00000341947 HSP90AB3PQ58FF7 597 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 CCDC196A0A1B0GTZ2 297 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 AKNAQ7Z591 1439 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 AMOTQ4VCS5 1084 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 CCDC148Q8NFR7 591 aa17.78■□□□□ 0.44
COL11A2-201ENST00000341947 CHMP4BP1P59074 171 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 MAP3K12Q12852 859 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 MIS18AQ9NYP9 233 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 MX1P20591 662 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 CCDC96Q2M329 555 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 RPGRQ92834 1020 aaKnown RBP17.77■□□□□ 0.44
COL11A2-201ENST00000341947 CIZ1Q9ULV3 898 aaPredicted RBP17.77■□□□□ 0.44
COL11A2-201ENST00000341947 ARHGAP29Q52LW3 1261 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 SLF2Q8IX21 1173 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 PHAXQ9H814 394 aaKnown RBP17.77■□□□□ 0.44
COL11A2-201ENST00000341947 EXOC6BQ9Y2D4 811 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
COL11A2-201ENST00000341947 CTCFLQ8NI51 663 aaPredicted RBP17.77■□□□□ 0.43
COL11A2-201ENST00000341947 TMEM57Q8N5G2 664 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 IFIT5Q13325 482 aaKnown RBP17.76■□□□□ 0.43
COL11A2-201ENST00000341947 MAP3K11Q16584 847 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 FKBP15Q5T1M5 1219 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 ZNF444Q8N0Y2 327 aaPredicted RBP17.76■□□□□ 0.43
COL11A2-201ENST00000341947 CFAP100Q494V2 611 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 MCM10Q7L590 875 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 TTLL12Q14166 644 aaPredicted RBP17.76■□□□□ 0.43
COL11A2-201ENST00000341947 GRPEL1Q9HAV7 217 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 NCAPD3P42695 1498 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 NBPF8Q3BBV2 869 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 DAPK1P53355 1430 aa17.76■□□□□ 0.43
COL11A2-201ENST00000341947 SPA17Q15506 151 aa17.75■□□□□ 0.43
COL11A2-201ENST00000341947 MPNDQ8N594 471 aa17.75■□□□□ 0.43
COL11A2-201ENST00000341947 PRPF40BQ6NWY9 871 aaKnown RBP17.75■□□□□ 0.43
COL11A2-201ENST00000341947 FILIP1Q7Z7B0 1213 aa17.75■□□□□ 0.43
COL11A2-201ENST00000341947 RAB34Q9BZG1 259 aa17.75■□□□□ 0.43
COL11A2-201ENST00000341947 TMEM266Q2M3C6 531 aa17.75■□□□□ 0.43
COL11A2-201ENST00000341947 TAF7Q15545 349 aaPredicted RBP17.74■□□□□ 0.43
COL11A2-201ENST00000341947 TRMT112Q9UI30 125 aaKnown RBP17.74■□□□□ 0.43
COL11A2-201ENST00000341947 CCDC83Q8IWF9 413 aa17.74■□□□□ 0.43
COL11A2-201ENST00000341947 UBA5Q9GZZ9 404 aa17.74■□□□□ 0.43
COL11A2-201ENST00000341947 CCDC150Q8NCX0 1101 aa17.74■□□□□ 0.43
COL11A2-201ENST00000341947 ANAPC15P60006 121 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 IQCA1Q86XH1 822 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 RANBP6O60518 1105 aaKnown RBP17.73■□□□□ 0.43
COL11A2-201ENST00000341947 BOLA2Q9H3K6 86 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 ANKRD18BA2A2Z9 1011 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 HMGB1P09429 215 aaKnown RBP17.73■□□□□ 0.43
COL11A2-201ENST00000341947 BACH2Q9BYV9 841 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 RNF41Q9H4P4 317 aaPredicted RBP17.73■□□□□ 0.43
COL11A2-201ENST00000341947 VPS36Q86VN1 386 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 SLC12A7Q9Y666 1083 aa17.73■□□□□ 0.43
COL11A2-201ENST00000341947 MPRIPQ6WCQ1 1025 aa17.72■□□□□ 0.43
COL11A2-201ENST00000341947 CCDC91Q7Z6B0 441 aa17.72■□□□□ 0.43
COL11A2-201ENST00000341947 EPRSP07814 1512 aaKnown RBP17.72■□□□□ 0.43
COL11A2-201ENST00000341947 FGFR1OPO95684 399 aaKnown RBP17.72■□□□□ 0.43
COL11A2-201ENST00000341947 WDR78Q5VTH9 848 aa17.72■□□□□ 0.43
COL11A2-201ENST00000341947 SNAPC4Q5SXM2 1469 aa17.72■□□□□ 0.43
COL11A2-201ENST00000341947 RBM10P98175 930 aaKnown RBP17.72■□□□□ 0.43
COL11A2-201ENST00000341947 CACNA2D4Q7Z3S7 1137 aa17.72■□□□□ 0.43
COL11A2-201ENST00000341947 CAMK4Q16566 473 aa17.71■□□□□ 0.43
COL11A2-201ENST00000341947 CCDC102AQ96A19 550 aa17.71■□□□□ 0.43
COL11A2-201ENST00000341947 ADAMTS2O95450 1211 aa17.71■□□□□ 0.43
COL11A2-201ENST00000341947 PAXIP1Q6ZW49 1069 aaPredicted RBP17.71■□□□□ 0.43
COL11A2-201ENST00000341947 USHBP1Q8N6Y0 703 aa17.71■□□□□ 0.43
COL11A2-201ENST00000341947 C8orf76Q96K31 380 aa17.71■□□□□ 0.43
COL11A2-201ENST00000341947 KIF20AO95235 890 aa17.71■□□□□ 0.42
COL11A2-201ENST00000341947 SSRP1Q08945 709 aaKnown RBP17.71■□□□□ 0.42
COL11A2-201ENST00000341947 ZNF213O14771 459 aa17.7■□□□□ 0.42
COL11A2-201ENST00000341947 SLFN5Q08AF3 891 aa17.7■□□□□ 0.42
COL11A2-201ENST00000341947 ARAP1Q96P48 1450 aa17.7■□□□□ 0.42
COL11A2-201ENST00000341947 SMARCA5O60264 1052 aaPredicted RBP17.7■□□□□ 0.42
COL11A2-201ENST00000341947 ALDH1L2Q3SY69 923 aa17.7■□□□□ 0.42
COL11A2-201ENST00000341947 SH2B1Q9NRF2 756 aaPredicted RBP17.7■□□□□ 0.42
COL11A2-201ENST00000341947 HYPKQ9NX55 129 aa17.7■□□□□ 0.42
COL11A2-201ENST00000341947 WAPLQ7Z5K2 1190 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 ANO10Q9NW15 660 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 CCDC194A0A1B0GVG4 234 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 TAF3Q5VWG9 929 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 FERMT3Q86UX7 667 aa17.69■□□□□ 0.42
COL11A2-201ENST00000341947 THUMPD2Q9BTF0 503 aaKnown RBP17.69■□□□□ 0.42
COL11A2-201ENST00000341947 BAG4O95429 457 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms