RNA–Protein interactions for RNA: ENST00000341866.3

LINC01164-201, Transcript of long intergenic non-protein coding RNA 1164, humanhuman

TSL 2 BASIC

Gene LINC01164, Length 3,384 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01164-201ENST00000341866 IGSF1Q8N6C5 1336 aa15.5■□□□□ 0.07
LINC01164-201ENST00000341866 HSPA2P54652 639 aa15.49■□□□□ 0.07
LINC01164-201ENST00000341866 XPCQ01831 940 aaPredicted RBP15.49■□□□□ 0.07
LINC01164-201ENST00000341866 PROSER2Q86WR7 435 aaPredicted RBP15.49■□□□□ 0.07
LINC01164-201ENST00000341866 OTUD7AQ8TE49 926 aaPredicted RBP15.49■□□□□ 0.07
LINC01164-201ENST00000341866 RGPD5Q99666 1765 aa15.49■□□□□ 0.07
LINC01164-201ENST00000341866 ZBTB7BO15156 539 aaPredicted RBP15.49■□□□□ 0.07
LINC01164-201ENST00000341866 NOL8Q76FK4 1167 aaKnown RBP15.49■□□□□ 0.07
LINC01164-201ENST00000341866 AHDC1Q5TGY3 1603 aaPredicted RBP15.49■□□□□ 0.07
LINC01164-201ENST00000341866 TSPYL4Q9UJ04 414 aa15.49■□□□□ 0.07
LINC01164-201ENST00000341866 FOXD4L5Q5VV16 416 aaPredicted RBP15.48■□□□□ 0.07
LINC01164-201ENST00000341866 FOXD4L4Q8WXT5 416 aaPredicted RBP15.48■□□□□ 0.07
LINC01164-201ENST00000341866 VIRMAQ69YN4 1812 aaKnown RBP15.48■□□□□ 0.07
LINC01164-201ENST00000341866 CT47B1P0C2W7 299 aaPredicted RBP15.48■□□□□ 0.07
LINC01164-201ENST00000341866 ZHX1Q9UKY1 873 aaPredicted RBP15.48■□□□□ 0.07
LINC01164-201ENST00000341866 SIPA1L3O60292 1781 aaPredicted RBP15.48■□□□□ 0.07
LINC01164-201ENST00000341866 HDAC1Q13547 482 aaPredicted RBP15.47■□□□□ 0.07
LINC01164-201ENST00000341866 CFAP44Q96MT7 982 aa15.47■□□□□ 0.07
LINC01164-201ENST00000341866 SMC5Q8IY18 1101 aa15.47■□□□□ 0.07
LINC01164-201ENST00000341866 ORAI2Q96SN7 254 aa15.47■□□□□ 0.07
LINC01164-201ENST00000341866 PRDM10Q9NQV6 1147 aa15.47■□□□□ 0.07
LINC01164-201ENST00000341866 TNS3Q68CZ2 1445 aa15.47■□□□□ 0.07
LINC01164-201ENST00000341866 EIF2S2P20042 333 aaKnown RBP15.46■□□□□ 0.07
LINC01164-201ENST00000341866 IFT57Q9NWB7 429 aa15.46■□□□□ 0.07
LINC01164-201ENST00000341866 NUCB1Q02818 461 aa15.46■□□□□ 0.07
LINC01164-201ENST00000341866 LMOD3Q0VAK6 560 aa15.46■□□□□ 0.07
LINC01164-201ENST00000341866 SIRT2Q8IXJ6 389 aa15.46■□□□□ 0.07
LINC01164-201ENST00000341866 MEIS3Q99687 375 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 PKD1L3Q7Z443 1732 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 MSH6P52701 1360 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 ZNF853P0CG23 659 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 ALDH1L2Q3SY69 923 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 G2E3Q7L622 706 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 CADPS2Q86UW7 1296 aa15.45■□□□□ 0.06
LINC01164-201ENST00000341866 HOXC9P31274 260 aa15.44■□□□□ 0.06
LINC01164-201ENST00000341866 PDE4CQ08493 712 aa15.44■□□□□ 0.06
LINC01164-201ENST00000341866 API5Q9BZZ5 524 aaKnown RBP15.44■□□□□ 0.06
LINC01164-201ENST00000341866 CPDO75976 1380 aa15.44■□□□□ 0.06
LINC01164-201ENST00000341866 ABTB2Q8N961 1025 aa15.44■□□□□ 0.06
LINC01164-201ENST00000341866 NCLP19338 710 aaKnown RBP15.43■□□□□ 0.06
LINC01164-201ENST00000341866 FKBP5Q13451 457 aaPredicted RBP15.43■□□□□ 0.06
LINC01164-201ENST00000341866 TBC1D9Q6ZT07 1266 aa15.43■□□□□ 0.06
LINC01164-201ENST00000341866 EXOC6BQ9Y2D4 811 aa15.43■□□□□ 0.06
LINC01164-201ENST00000341866 ESCO1Q5FWF5 840 aa15.43■□□□□ 0.06
LINC01164-201ENST00000341866 GAS2L3Q86XJ1 694 aa15.43■□□□□ 0.06
LINC01164-201ENST00000341866 SOS2Q07890 1332 aaPredicted RBP15.43■□□□□ 0.06
LINC01164-201ENST00000341866 MTHFSDQ2M296 383 aaKnown RBP15.42■□□□□ 0.06
LINC01164-201ENST00000341866 FOXD4L6Q3SYB3 417 aaPredicted RBP15.42■□□□□ 0.06
LINC01164-201ENST00000341866 FOXD4L3Q6VB84 417 aaPredicted RBP15.42■□□□□ 0.06
LINC01164-201ENST00000341866 KCNH5Q8NCM2 988 aa15.42■□□□□ 0.06
LINC01164-201ENST00000341866 R3HCC1Q9Y3T6 440 aaKnown RBP15.42■□□□□ 0.06
LINC01164-201ENST00000341866 KDM3BQ7LBC6 1761 aa15.42■□□□□ 0.06
LINC01164-201ENST00000341866 IP6K1Q92551 441 aa15.42■□□□□ 0.06
LINC01164-201ENST00000341866 PARP4Q9UKK3 1724 aaKnown RBP15.42■□□□□ 0.06
LINC01164-201ENST00000341866 CRB1P82279 1406 aa15.41■□□□□ 0.06
LINC01164-201ENST00000341866 ARHGEF25Q86VW2 580 aa15.41■□□□□ 0.06
LINC01164-201ENST00000341866 ZNF335Q9H4Z2 1342 aaPredicted RBP15.41■□□□□ 0.06
LINC01164-201ENST00000341866 CD2BP2O95400 341 aaKnown RBP15.41■□□□□ 0.06
LINC01164-201ENST00000341866 CHMP5Q9NZZ3 219 aa15.41■□□□□ 0.06
LINC01164-201ENST00000341866 ANXA1P04083 346 aa15.41■□□□□ 0.06
LINC01164-201ENST00000341866 BRPF1P55201 1214 aaPredicted RBP15.41■□□□□ 0.06
LINC01164-201ENST00000341866 N4BP2Q86UW6 1770 aaPredicted RBP15.41■□□□□ 0.06
LINC01164-201ENST00000341866 OVOS2A0A0G2JMS6 1433 aa15.4■□□□□ 0.06
LINC01164-201ENST00000341866 SPATA31A3Q5VYP0 1347 aa15.4■□□□□ 0.06
LINC01164-201ENST00000341866 STK31Q9BXU1 1019 aa15.39■□□□□ 0.05
LINC01164-201ENST00000341866 ROBO1Q9Y6N7 1651 aa15.39■□□□□ 0.05
LINC01164-201ENST00000341866 TRIM6-TRIM34B2RNG4 842 aa15.39■□□□□ 0.05
LINC01164-201ENST00000341866 RILPL2Q969X0 211 aa15.39■□□□□ 0.05
LINC01164-201ENST00000341866 BRINP3Q76B58 766 aa15.38■□□□□ 0.05
LINC01164-201ENST00000341866 KRT28Q7Z3Y7 464 aa15.38■□□□□ 0.05
LINC01164-201ENST00000341866 EYA1Q99502 592 aa15.38■□□□□ 0.05
LINC01164-201ENST00000341866 SHANK3Q9BYB0 1731 aa15.38■□□□□ 0.05
LINC01164-201ENST00000341866 MSNP26038 577 aaKnown RBP15.38■□□□□ 0.05
LINC01164-201ENST00000341866 NPHP3Q7Z494 1330 aa15.38■□□□□ 0.05
LINC01164-201ENST00000341866 MAP4K4O95819 1239 aaPredicted RBP15.38■□□□□ 0.05
LINC01164-201ENST00000341866 GCC1Q96CN9 775 aa15.38■□□□□ 0.05
LINC01164-201ENST00000341866 PSME1Q06323 249 aa15.37■□□□□ 0.05
LINC01164-201ENST00000341866 PLCH1Q4KWH8 1693 aa15.37■□□□□ 0.05
LINC01164-201ENST00000341866 OFD1O75665 1012 aa15.37■□□□□ 0.05
LINC01164-201ENST00000341866 DTNBO60941 627 aa15.36■□□□□ 0.05
LINC01164-201ENST00000341866 ATF3P18847 181 aa15.36■□□□□ 0.05
LINC01164-201ENST00000341866 CHMP4BQ9H444 224 aaKnown RBP15.36■□□□□ 0.05
LINC01164-201ENST00000341866 WNK3Q9BYP7 1800 aa15.36■□□□□ 0.05
LINC01164-201ENST00000341866 IL1RAPL2Q9NP60 686 aa15.36■□□□□ 0.05
LINC01164-201ENST00000341866 DDX11L8A8MPP1 907 aa15.36■□□□□ 0.05
LINC01164-201ENST00000341866 HTATSF1O43719 755 aaKnown RBP15.36■□□□□ 0.05
LINC01164-201ENST00000341866 COL16A1Q07092 1604 aaPredicted RBP15.35■□□□□ 0.05
LINC01164-201ENST00000341866 GCP02774 474 aa15.35■□□□□ 0.05
LINC01164-201ENST00000341866 GSPT1P15170 499 aaKnown RBP15.35■□□□□ 0.05
LINC01164-201ENST00000341866 ZSCAN30Q86W11 494 aa15.35■□□□□ 0.05
LINC01164-201ENST00000341866 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.35■□□□□ 0.05
LINC01164-201ENST00000341866 SCN11AQ9UI33 1791 aa15.34■□□□□ 0.05
LINC01164-201ENST00000341866 BMP2KLQ5H9B9 411 aa15.34■□□□□ 0.05
LINC01164-201ENST00000341866 CDC45O75419 566 aa15.34■□□□□ 0.05
LINC01164-201ENST00000341866 PLEKHM2Q8IWE5 1019 aa15.34■□□□□ 0.05
LINC01164-201ENST00000341866 CHAMP1Q96JM3 812 aa15.34■□□□□ 0.05
LINC01164-201ENST00000341866 CEMIPQ8WUJ3 1361 aa15.34■□□□□ 0.05
LINC01164-201ENST00000341866 UQCRHLA0A096LP55 91 aa15.33■□□□□ 0.04
LINC01164-201ENST00000341866 UQCRHP07919 91 aa15.33■□□□□ 0.04
LINC01164-201ENST00000341866 BBXQ8WY36 941 aaPredicted RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms