RNA–Protein interactions for RNA: ENST00000340748.8

DNMT1-201, Transcript of DNA methyltransferase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DNMT1, Length 5,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-201ENST00000340748 ZNF396Q96N95 335 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-201ENST00000340748 GPTP24298 496 aa15.29■□□□□ 0.04
DNMT1-201ENST00000340748 CYP46A1Q9Y6A2 500 aa15.29■□□□□ 0.04
DNMT1-201ENST00000340748 LTKP29376 864 aa15.29■□□□□ 0.04
DNMT1-201ENST00000340748 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.29■□□□□ 0.046e-7■■■□□ 15.2
DNMT1-201ENST00000340748 TSPY26PQ9H489 355 aa15.29■□□□□ 0.04
DNMT1-201ENST00000340748 ANO8Q9HCE9 1232 aaPredicted RBP15.29■□□□□ 0.04
DNMT1-201ENST00000340748 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-201ENST00000340748 ARHGEF10O15013 1369 aa15.28■□□□□ 0.04
DNMT1-201ENST00000340748 TAF7Q15545 349 aaPredicted RBP15.28■□□□□ 0.04
DNMT1-201ENST00000340748 SETDB2Q96T68 719 aa15.28■□□□□ 0.04
DNMT1-201ENST00000340748 SDF4Q9BRK5 362 aa15.28■□□□□ 0.04
DNMT1-201ENST00000340748 CAVIN1Q6NZI2 390 aaKnown RBP15.28■□□□□ 0.04
DNMT1-201ENST00000340748 DDX46Q7L014 1031 aaKnown RBP15.28■□□□□ 0.04
DNMT1-201ENST00000340748 ALDH1L2Q3SY69 923 aa15.28■□□□□ 0.04
DNMT1-201ENST00000340748 IFT57Q9NWB7 429 aa15.27■□□□□ 0.04
DNMT1-201ENST00000340748 SLC3A2P08195 630 aaKnown RBP15.27■□□□□ 0.03
DNMT1-201ENST00000340748 NKTRP30414 1462 aaKnown RBP15.27■□□□□ 0.03
DNMT1-201ENST00000340748 SCAF11Q99590 1463 aaKnown RBP15.27■□□□□ 0.03
DNMT1-201ENST00000340748 PRPF40AO75400 957 aaKnown RBP15.27■□□□□ 0.03
DNMT1-201ENST00000340748 CIZ1Q9ULV3 898 aaPredicted RBP15.26■□□□□ 0.03
DNMT1-201ENST00000340748 KINO60870 393 aaKnown RBP15.26■□□□□ 0.03
DNMT1-201ENST00000340748 PPP1R42Q7Z4L9 355 aa15.26■□□□□ 0.03
DNMT1-201ENST00000340748 SIL1Q9H173 461 aa15.26■□□□□ 0.03
DNMT1-201ENST00000340748 TRPM2O94759 1503 aa15.26■□□□□ 0.03
DNMT1-201ENST00000340748 WDR33Q9C0J8 1336 aaKnown RBP15.26■□□□□ 0.03
DNMT1-201ENST00000340748 MAGI2Q86UL8 1455 aa15.26■□□□□ 0.03
DNMT1-201ENST00000340748 NSD2O96028 1365 aa15.26■□□□□ 0.03
DNMT1-201ENST00000340748 ZBTB3Q9H5J0 574 aa15.25■□□□□ 0.03
DNMT1-201ENST00000340748 PDE4CQ08493 712 aa15.25■□□□□ 0.03
DNMT1-201ENST00000340748 CCDC43Q96MW1 224 aaKnown RBP15.25■□□□□ 0.03
DNMT1-201ENST00000340748 C11orf95C9JLR9 678 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-201ENST00000340748 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.25■□□□□ 0.03
DNMT1-201ENST00000340748 CCDC173Q0VFZ6 552 aa15.25■□□□□ 0.03
DNMT1-201ENST00000340748 TRAPPC3LQ5T215 181 aa15.25■□□□□ 0.03
DNMT1-201ENST00000340748 GNPATO15228 680 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 TMEM57Q8N5G2 664 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 CNKSR2Q8WXI2 1034 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 ZSCAN25Q6NSZ9 544 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 RIMBP3CA6NJZ7 1639 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 RIMBP3BA6NNM3 1639 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 RIMBP3Q9UFD9 1639 aa15.24■□□□□ 0.03
DNMT1-201ENST00000340748 MYD88Q99836 296 aa15.23■□□□□ 0.03
DNMT1-201ENST00000340748 ARGLU1Q9NWB6 273 aaPredicted RBP15.23■□□□□ 0.03
DNMT1-201ENST00000340748 ZSCAN31Q96LW9 406 aaPredicted RBP15.23■□□□□ 0.03
DNMT1-201ENST00000340748 RAI14Q9P0K7 980 aa15.23■□□□□ 0.03
DNMT1-201ENST00000340748 CAVIN4Q5BKX8 364 aa15.23■□□□□ 0.03
DNMT1-201ENST00000340748 JDP2Q8WYK2 163 aa15.23■□□□□ 0.03
DNMT1-201ENST00000340748 SRGAP3O43295 1099 aa15.23■□□□□ 0.03
DNMT1-201ENST00000340748 PDIA4P13667 645 aaKnown RBP15.22■□□□□ 0.03
DNMT1-201ENST00000340748 DCTN1Q14203 1278 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 SPINK5Q9NQ38 1064 aaPredicted RBP15.22■□□□□ 0.03
DNMT1-201ENST00000340748 RARSP54136 660 aaKnown RBP15.22■□□□□ 0.03
DNMT1-201ENST00000340748 TEX35Q5T0J7 233 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 RNF214Q8ND24 703 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 JMYQ8N9B5 988 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 MNS1Q8NEH6 495 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 CEP126Q9P2H0 1117 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 LMOD1P29536 600 aaPredicted RBP15.22■□□□□ 0.03
DNMT1-201ENST00000340748 DHX8Q14562 1220 aaKnown RBP15.22■□□□□ 0.03
DNMT1-201ENST00000340748 AACSQ86V21 672 aa15.22■□□□□ 0.03
DNMT1-201ENST00000340748 NACAP1Q9BZK3 213 aa15.21■□□□□ 0.03
DNMT1-201ENST00000340748 TRIM5Q9C035 493 aa15.21■□□□□ 0.03
DNMT1-201ENST00000340748 STK38Q15208 465 aa15.21■□□□□ 0.03
DNMT1-201ENST00000340748 FIBPO43427 364 aa15.21■□□□□ 0.02
DNMT1-201ENST00000340748 METTL24Q5JXM2 366 aa15.21■□□□□ 0.02
DNMT1-201ENST00000340748 LARP1Q6PKG0 1096 aaKnown RBP15.21■□□□□ 0.02
DNMT1-201ENST00000340748 CCP110O43303 1012 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 PCDH11XQ9BZA7 1347 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 PCDH11YQ9BZA8 1340 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 RAB11FIP3O75154 756 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 KRI1Q8N9T8 703 aaKnown RBP15.2■□□□□ 0.02
DNMT1-201ENST00000340748 SIRT1Q96EB6 747 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 FAM13BQ9NYF5 915 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 KRT32Q14532 448 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 HSP90AB2PQ58FF8 381 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 MAPKBP1O60336 1514 aa15.2■□□□□ 0.02
DNMT1-201ENST00000340748 UGGT1Q9NYU2 1555 aa15.19■□□□□ 0.02
DNMT1-201ENST00000340748 SNRPA1P09661 255 aaKnown RBP15.19■□□□□ 0.02
DNMT1-201ENST00000340748 PIP4K2AP48426 406 aaPredicted RBP15.19■□□□□ 0.02
DNMT1-201ENST00000340748 DUSP27Q5VZP5 1158 aa15.19■□□□□ 0.02
DNMT1-201ENST00000340748 ACBD3Q9H3P7 528 aa15.19■□□□□ 0.02
DNMT1-201ENST00000340748 TXLNAP40222 546 aa15.19■□□□□ 0.02
DNMT1-201ENST00000340748 MYO1BO43795 1136 aa15.19■□□□□ 0.02
DNMT1-201ENST00000340748 KRT85P78386 507 aa15.19■□□□□ 0.02
DNMT1-201ENST00000340748 YTHDC2Q9H6S0 1430 aaKnown RBP15.19■□□□□ 0.02
DNMT1-201ENST00000340748 SETQ01105 290 aaPredicted RBP15.18■□□□□ 0.02
DNMT1-201ENST00000340748 PDRG1Q9NUG6 133 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 LRP2BPQ9P2M1 347 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 CTNNA3Q9UI47 895 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 NPATQ14207 1427 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 ERCC6L2Q5T890 1561 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 CCDC192P0DO97 292 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 FBLN1P23142 703 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 BLOC1S2Q6QNY1 142 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 KRT27Q7Z3Y8 459 aa15.18■□□□□ 0.02
DNMT1-201ENST00000340748 MTERF4Q7Z6M4 381 aaKnown RBP15.18■□□□□ 0.02
DNMT1-201ENST00000340748 ZCCHC11Q5TAX3 1644 aaKnown RBP15.18■□□□□ 0.02
DNMT1-201ENST00000340748 THUMPD2Q9BTF0 503 aaKnown RBP15.18■□□□□ 0.02
DNMT1-201ENST00000340748 BEGAINQ9BUH8 593 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms