RNA–Protein interactions for RNA: ENST00000339363.7

RPGR-202, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 3,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-202ENST00000339363 RRS1Q15050 365 aaKnown RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 C10orf67Q8IYJ2 551 aa11.16□□□□□ -0.62
RPGR-202ENST00000339363 GOLGA6L1Q8N7Z2 621 aa11.16□□□□□ -0.62
RPGR-202ENST00000339363 MED14O60244 1454 aa11.16□□□□□ -0.62
RPGR-202ENST00000339363 HTATSF1O43719 755 aaKnown RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 TRHP20396 242 aaPredicted RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 FBXO31Q5XUX0 539 aaPredicted RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 NOL10Q9BSC4 688 aaKnown RBP11.16□□□□□ -0.62
RPGR-202ENST00000339363 HCLS1P14317 486 aaPredicted RBP11.15□□□□□ -0.62
RPGR-202ENST00000339363 CASC1Q6TDU7 716 aa11.15□□□□□ -0.62
RPGR-202ENST00000339363 TERF2Q15554 542 aa11.15□□□□□ -0.62
RPGR-202ENST00000339363 MIS18AQ9NYP9 233 aa11.15□□□□□ -0.62
RPGR-202ENST00000339363 RABEP1Q15276 862 aa11.15□□□□□ -0.62
RPGR-202ENST00000339363 USP32Q8NFA0 1604 aa11.15□□□□□ -0.62
RPGR-202ENST00000339363 POLR3GO15318 223 aaPredicted RBP11.14□□□□□ -0.63
RPGR-202ENST00000339363 TNNT1P13805 278 aa11.14□□□□□ -0.63
RPGR-202ENST00000339363 FKBP5Q13451 457 aaPredicted RBP11.14□□□□□ -0.63
RPGR-202ENST00000339363 NME9Q86XW9 330 aa11.14□□□□□ -0.63
RPGR-202ENST00000339363 FAM184AQ8NB25 1140 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 IL25Q9H293 177 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 RASSF4Q9H2L5 321 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 CWC22Q9HCG8 908 aaKnown RBP11.13□□□□□ -0.63
RPGR-202ENST00000339363 CDK19Q9BWU1 502 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 NEXMIFQ5QGS0 1516 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 PNPLA6Q8IY17 1366 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 CLGNO14967 610 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
RPGR-202ENST00000339363 USP26Q9BXU7 913 aa11.13□□□□□ -0.63
RPGR-202ENST00000339363 PTPRMP28827 1452 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 MYO5BQ9ULV0 1848 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 LOC102724159A0A0B4J2E5 919 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 SLFN14P0C7P3 912 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 SDSP20132 328 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 GPS2Q13227 327 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 NAA30Q147X3 362 aaPredicted RBP11.12□□□□□ -0.63
RPGR-202ENST00000339363 PWP2Q15269 919 aaKnown RBP11.12□□□□□ -0.63
RPGR-202ENST00000339363 CHMP3Q9Y3E7 222 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 MYCNP04198 464 aaPredicted RBP11.12□□□□□ -0.63
RPGR-202ENST00000339363 ABCC4O15439 1325 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 NEURL4Q96JN8 1562 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 LMOD3Q0VAK6 560 aa11.12□□□□□ -0.63
RPGR-202ENST00000339363 FAM135BQ49AJ0 1406 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 ASXL2Q76L83 1435 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 TPM3P06753 285 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 GTF3C6Q969F1 213 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 MEIS3Q99687 375 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 CDC45O75419 566 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 HNRNPH2P55795 449 aaKnown RBP11.11□□□□□ -0.63
RPGR-202ENST00000339363 TWISTNBQ3B726 338 aaPredicted RBP11.11□□□□□ -0.63
RPGR-202ENST00000339363 PALD1Q9ULE6 856 aa11.11□□□□□ -0.63
RPGR-202ENST00000339363 LARP6Q9BRS8 491 aaKnown RBP11.11□□□□□ -0.63
RPGR-202ENST00000339363 ZNF853P0CG23 659 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 NCBP1Q09161 790 aaKnown RBP11.1□□□□□ -0.63
RPGR-202ENST00000339363 MCM10Q7L590 875 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 F6X3S4 739 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 CNPY4Q8N129 248 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 CWC15Q9P013 229 aaKnown RBP11.1□□□□□ -0.63
RPGR-202ENST00000339363 CTNNA3Q9UI47 895 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 PYCARDQ9ULZ3 195 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 ABCC3O15438 1527 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 RGS12O14924 1447 aa11.1□□□□□ -0.63
RPGR-202ENST00000339363 CT47B1P0C2W7 299 aaPredicted RBP11.1□□□□□ -0.63
RPGR-202ENST00000339363 DDX41Q9UJV9 622 aaKnown RBP11.1□□□□□ -0.63
RPGR-202ENST00000339363 ATP10DQ9P241 1426 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 ALDH1L2Q3SY69 923 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 YTHDC2Q9H6S0 1430 aaKnown RBP11.09□□□□□ -0.63
RPGR-202ENST00000339363 IL16Q14005 1332 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 CAPN2P17655 700 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 IL13P35225 146 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 TTC22Q5TAA0 569 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 G2E3Q7L622 706 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 PTCH1Q13635 1447 aa11.09□□□□□ -0.63
RPGR-202ENST00000339363 IPO8O15397 1037 aaKnown RBP11.08□□□□□ -0.63
RPGR-202ENST00000339363 NEK4P51957 841 aa11.08□□□□□ -0.63
RPGR-202ENST00000339363 NFE2L2Q16236 605 aa11.08□□□□□ -0.63
RPGR-202ENST00000339363 NOM1Q5C9Z4 860 aaKnown RBP11.08□□□□□ -0.63
RPGR-202ENST00000339363 BANK1Q8NDB2 785 aa11.08□□□□□ -0.63
RPGR-202ENST00000339363 DEF6Q9H4E7 631 aa11.08□□□□□ -0.63
RPGR-202ENST00000339363 FOXO3O43524 673 aa11.08□□□□□ -0.64
RPGR-202ENST00000339363 ZNF397Q8NF99 534 aaPredicted RBP11.08□□□□□ -0.64
RPGR-202ENST00000339363 TRIM5Q9C035 493 aa11.08□□□□□ -0.64
RPGR-202ENST00000339363 PIK3R4Q99570 1358 aa11.08□□□□□ -0.64
RPGR-202ENST00000339363 UVSSAQ2YD98 709 aa11.08□□□□□ -0.64
RPGR-202ENST00000339363 ANKRD7Q92527 254 aa11.08□□□□□ -0.64
RPGR-202ENST00000339363 LMTK2Q8IWU2 1503 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 SMTNL1A8MU46 457 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 GADD45BO75293 160 aaPredicted RBP11.07□□□□□ -0.64
RPGR-202ENST00000339363 FCHSD2O94868 740 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 FAM193AP78312 1265 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 MLECQ14165 292 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 NEK11Q8NG66 645 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 DRC1Q96MC2 740 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 ST7Q9NRC1 585 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 FEZ2Q9UHY8 353 aaPredicted RBP11.07□□□□□ -0.64
RPGR-202ENST00000339363 PIK3C2BO00750 1634 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 SOX12O15370 315 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 PTGS1P23219 599 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 RAD51AP2Q09MP3 1159 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 UNC5CLQ8IV45 518 aa11.07□□□□□ -0.64
RPGR-202ENST00000339363 KIF18AQ8NI77 898 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms