RNA–Protein interactions for RNA: ENST00000336803.1

CLDN2-201, Transcript of claudin 2, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CLDN2, Length 2,959 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN2-201ENST00000336803 TNS3Q68CZ2 1445 aa11.56□□□□□ -0.56
CLDN2-201ENST00000336803 RPAP2Q8IXW5 612 aaPredicted RBP11.55□□□□□ -0.56
CLDN2-201ENST00000336803 ANKRD44Q8N8A2 993 aa11.55□□□□□ -0.56
CLDN2-201ENST00000336803 NPHP3Q7Z494 1330 aa11.55□□□□□ -0.56
CLDN2-201ENST00000336803 SEC24BO95487 1268 aa11.55□□□□□ -0.56
CLDN2-201ENST00000336803 CCT4P50991 539 aaKnown RBP11.55□□□□□ -0.56
CLDN2-201ENST00000336803 LRRC59Q96AG4 307 aaKnown RBP11.55□□□□□ -0.56
CLDN2-201ENST00000336803 DCTPP1Q9H773 170 aa11.55□□□□□ -0.56
CLDN2-201ENST00000336803 AXIN2Q9Y2T1 843 aa11.55□□□□□ -0.56
CLDN2-201ENST00000336803 ERBB3P21860 1342 aa11.54□□□□□ -0.56
CLDN2-201ENST00000336803 G2E3Q7L622 706 aa11.54□□□□□ -0.56
CLDN2-201ENST00000336803 STK31Q9BXU1 1019 aa11.54□□□□□ -0.56
CLDN2-201ENST00000336803 CHMP4AQ9BY43 222 aa11.54□□□□□ -0.56
CLDN2-201ENST00000336803 C1orf115Q9H7X2 142 aa11.54□□□□□ -0.56
CLDN2-201ENST00000336803 CPDO75976 1380 aa11.53□□□□□ -0.56
CLDN2-201ENST00000336803 EIF4A1P60842 406 aaKnown RBP11.53□□□□□ -0.56
CLDN2-201ENST00000336803 LGR6Q9HBX8 967 aa11.53□□□□□ -0.56
CLDN2-201ENST00000336803 HEG1Q9ULI3 1381 aa11.52□□□□□ -0.56
CLDN2-201ENST00000336803 CEP85Q6P2H3 762 aa11.52□□□□□ -0.56
CLDN2-201ENST00000336803 SPATA31A3Q5VYP0 1347 aa11.52□□□□□ -0.56
CLDN2-201ENST00000336803 RNMTO43148 476 aaKnown RBP11.52□□□□□ -0.57
CLDN2-201ENST00000336803 BMP2KLQ5H9B9 411 aa11.52□□□□□ -0.57
CLDN2-201ENST00000336803 ZNF530Q6P9A1 599 aaPredicted RBP11.52□□□□□ -0.57
CLDN2-201ENST00000336803 TBC1D32Q96NH3 1257 aa11.52□□□□□ -0.57
CLDN2-201ENST00000336803 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
CLDN2-201ENST00000336803 FLIIQ13045 1269 aa11.52□□□□□ -0.57
CLDN2-201ENST00000336803 KDM4FA0A1W2PPD8 638 aa11.51□□□□□ -0.57
CLDN2-201ENST00000336803 ANKRD45Q5TZF3 282 aa11.51□□□□□ -0.57
CLDN2-201ENST00000336803 PKD1L3Q7Z443 1732 aa11.51□□□□□ -0.57
CLDN2-201ENST00000336803 LNPKQ9C0E8 428 aa11.51□□□□□ -0.57
CLDN2-201ENST00000336803 ZMYND15Q9H091 742 aa11.51□□□□□ -0.57
CLDN2-201ENST00000336803 LMOD2Q6P5Q4 547 aa11.51□□□□□ -0.57
CLDN2-201ENST00000336803 HSPA2P54652 639 aa11.5□□□□□ -0.57
CLDN2-201ENST00000336803 NBR1Q14596 966 aa11.5□□□□□ -0.57
CLDN2-201ENST00000336803 MEIS3Q99687 375 aa11.5□□□□□ -0.57
CLDN2-201ENST00000336803 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.5□□□□□ -0.57
CLDN2-201ENST00000336803 ZBTB7CA1YPR0 619 aa11.5□□□□□ -0.57
CLDN2-201ENST00000336803 UPF2Q9HAU5 1272 aaKnown RBP11.5□□□□□ -0.57
CLDN2-201ENST00000336803 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
CLDN2-201ENST00000336803 MRC1P22897 1456 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 BTBD11A6QL63 1104 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 F6X3S4 739 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 TEFQ10587 303 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 HDGFL1Q5TGJ6 251 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 GNAI3P08754 354 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
CLDN2-201ENST00000336803 BRINP3Q76B58 766 aa11.48□□□□□ -0.57
CLDN2-201ENST00000336803 DDX17Q92841 729 aaKnown RBP11.48□□□□□ -0.57
CLDN2-201ENST00000336803 PARP4Q9UKK3 1724 aaKnown RBP11.48□□□□□ -0.57
CLDN2-201ENST00000336803 ABCA3Q99758 1704 aa11.47□□□□□ -0.57
CLDN2-201ENST00000336803 SOS2Q07890 1332 aaPredicted RBP11.47□□□□□ -0.57
CLDN2-201ENST00000336803 MPRIPQ6WCQ1 1025 aa11.47□□□□□ -0.57
CLDN2-201ENST00000336803 GNAI2P04899 355 aa11.47□□□□□ -0.57
CLDN2-201ENST00000336803 FKBP5Q13451 457 aaPredicted RBP11.47□□□□□ -0.57
CLDN2-201ENST00000336803 HMMRO75330 724 aa11.46□□□□□ -0.57
CLDN2-201ENST00000336803 PLEKHM2Q8IWE5 1019 aa11.46□□□□□ -0.57
CLDN2-201ENST00000336803 NHSL1Q5SYE7 1610 aa11.46□□□□□ -0.57
CLDN2-201ENST00000336803 MEGF6O75095 1541 aa11.46□□□□□ -0.58
CLDN2-201ENST00000336803 KCNQ3O43525 872 aa11.46□□□□□ -0.58
CLDN2-201ENST00000336803 SLC4A10Q6U841 1118 aa11.46□□□□□ -0.58
CLDN2-201ENST00000336803 KDM6AO15550 1401 aaPredicted RBP11.45□□□□□ -0.58
CLDN2-201ENST00000336803 IBTKQ9P2D0 1353 aaPredicted RBP11.45□□□□□ -0.58
CLDN2-201ENST00000336803 GIGYF1O75420 1035 aaPredicted RBP11.45□□□□□ -0.58
CLDN2-201ENST00000336803 TATP17735 454 aaPredicted RBP11.45□□□□□ -0.58
CLDN2-201ENST00000336803 RBM25P49756 843 aaKnown RBP11.45□□□□□ -0.58
CLDN2-201ENST00000336803 ATP8B2P98198 1209 aa11.45□□□□□ -0.58
CLDN2-201ENST00000336803 RAPGEF4Q8WZA2 1011 aa11.45□□□□□ -0.58
CLDN2-201ENST00000336803 C22orf23Q9BZE7 217 aa11.45□□□□□ -0.58
CLDN2-201ENST00000336803 SPG7Q9UQ90 795 aa11.45□□□□□ -0.58
CLDN2-201ENST00000336803 PHKG2P15735 406 aa11.44□□□□□ -0.58
CLDN2-201ENST00000336803 VSIG10Q8N0Z9 540 aa11.44□□□□□ -0.58
CLDN2-201ENST00000336803 PHAXQ9H814 394 aaKnown RBP11.44□□□□□ -0.58
CLDN2-201ENST00000336803 BECN1Q14457 450 aa11.44□□□□□ -0.58
CLDN2-201ENST00000336803 USP44Q9H0E7 712 aa11.44□□□□□ -0.58
CLDN2-201ENST00000336803 SLAIN2Q9P270 581 aa11.44□□□□□ -0.58
CLDN2-201ENST00000336803 TUBGCP6Q96RT7 1819 aa11.44□□□□□ -0.58
CLDN2-201ENST00000336803 TTC22Q5TAA0 569 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 NECTIN2Q92692 538 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 OSBPL3Q9H4L5 887 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 DBF4Q9UBU7 674 aaPredicted RBP11.43□□□□□ -0.58
CLDN2-201ENST00000336803 C5P01031 1676 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 PDE4CQ08493 712 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 SLC52A2Q9HAB3 445 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 CHPF2Q9P2E5 772 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 USP35Q9P2H5 1018 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 BEND3Q5T5X7 828 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 ADCY9O60503 1353 aa11.43□□□□□ -0.58
CLDN2-201ENST00000336803 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
CLDN2-201ENST00000336803 IFNL2Q8IZJ0 200 aa11.42□□□□□ -0.58
CLDN2-201ENST00000336803 CABLES1Q8TDN4 633 aa11.42□□□□□ -0.58
CLDN2-201ENST00000336803 ZNF335Q9H4Z2 1342 aaPredicted RBP11.42□□□□□ -0.58
CLDN2-201ENST00000336803 SLC4A3P48751 1232 aa11.42□□□□□ -0.58
CLDN2-201ENST00000336803 SRCIN1Q9C0H9 1055 aa11.42□□□□□ -0.58
CLDN2-201ENST00000336803 SALL3Q9BXA9 1300 aa11.42□□□□□ -0.58
CLDN2-201ENST00000336803 EIF2S2P20042 333 aaKnown RBP11.41□□□□□ -0.58
CLDN2-201ENST00000336803 MFAP1P55081 439 aaKnown RBP11.41□□□□□ -0.58
CLDN2-201ENST00000336803 TBC1D9Q6ZT07 1266 aa11.41□□□□□ -0.58
CLDN2-201ENST00000336803 DNAAF4Q8WXU2 420 aa11.41□□□□□ -0.58
CLDN2-201ENST00000336803 CDC45O75419 566 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms