RNA–Protein interactions for RNA: ENST00000334668.8

HLA-F-217, Transcript of major histocompatibility complex, class I, F, humanhuman

APPRIS ALT2 BASIC

Gene HLA-F, Length 1,283 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-217ENST00000334668 PHACTR3Q96KR7 559 aa24.53■■□□□ 1.52
HLA-F-217ENST00000334668 SLC27A3Q5K4L6 730 aa24.52■■□□□ 1.52
HLA-F-217ENST00000334668 TMOD3Q9NYL9 352 aa24.52■■□□□ 1.52
HLA-F-217ENST00000334668 PAPPAQ13219 1627 aa24.52■■□□□ 1.52
HLA-F-217ENST00000334668 GAS2L2Q8NHY3 880 aa24.51■■□□□ 1.51
HLA-F-217ENST00000334668 LRRC4BQ9NT99 713 aa24.51■■□□□ 1.51
HLA-F-217ENST00000334668 NBPF14Q5TI25 921 aa24.5■■□□□ 1.51
HLA-F-217ENST00000334668 SMARCC1Q92922 1105 aaPredicted RBP24.49■■□□□ 1.51
HLA-F-217ENST00000334668 RNMTO43148 476 aaKnown RBP24.48■■□□□ 1.51
HLA-F-217ENST00000334668 MRC1P22897 1456 aa24.48■■□□□ 1.51
HLA-F-217ENST00000334668 PALLDQ8WX93 1383 aa24.48■■□□□ 1.51
HLA-F-217ENST00000334668 PLEKHF1Q96S99 279 aa24.48■■□□□ 1.51
HLA-F-217ENST00000334668 LGR6Q9HBX8 967 aa24.48■■□□□ 1.51
HLA-F-217ENST00000334668 ANO8Q9HCE9 1232 aaPredicted RBP24.48■■□□□ 1.51
HLA-F-217ENST00000334668 SRCAPQ6ZRS2 3230 aa24.47■■□□□ 1.51
HLA-F-217ENST00000334668 MAP3K5Q99683 1374 aa24.47■■□□□ 1.51
HLA-F-217ENST00000334668 TAF1LQ8IZX4 1826 aa24.47■■□□□ 1.51
HLA-F-217ENST00000334668 CABP4P57796 275 aa24.46■■□□□ 1.51
HLA-F-217ENST00000334668 R3HDM1Q15032 1099 aaKnown RBP24.46■■□□□ 1.51
HLA-F-217ENST00000334668 ASAP1Q9ULH1 1129 aa24.46■■□□□ 1.51
HLA-F-217ENST00000334668 GNAT3A8MTJ3 354 aa24.45■■□□□ 1.5
HLA-F-217ENST00000334668 ATG3Q9NT62 314 aa24.45■■□□□ 1.5
HLA-F-217ENST00000334668 DLG5Q8TDM6 1919 aa24.44■■□□□ 1.5
HLA-F-217ENST00000334668 PSDA5PKW4 1024 aaPredicted RBP24.44■■□□□ 1.5
HLA-F-217ENST00000334668 NFATC2IPQ8NCF5 419 aa24.44■■□□□ 1.5
HLA-F-217ENST00000334668 SLC52A2Q9HAB3 445 aa24.44■■□□□ 1.5
HLA-F-217ENST00000334668 PNNQ9H307 717 aaKnown RBP24.43■■□□□ 1.5
HLA-F-217ENST00000334668 CCNL1Q9UK58 526 aaPredicted RBP24.43■■□□□ 1.5
HLA-F-217ENST00000334668 ZNF831Q5JPB2 1677 aa24.43■■□□□ 1.5
HLA-F-217ENST00000334668 SIPA1L3O60292 1781 aaPredicted RBP24.42■■□□□ 1.5
HLA-F-217ENST00000334668 IL17REQ8NFR9 667 aa24.42■■□□□ 1.5
HLA-F-217ENST00000334668 CEMIPQ8WUJ3 1361 aa24.42■■□□□ 1.5
HLA-F-217ENST00000334668 C5P01031 1676 aa24.41■■□□□ 1.5
HLA-F-217ENST00000334668 ANP32CO43423 234 aa24.41■■□□□ 1.5
HLA-F-217ENST00000334668 KCNQ4P56696 695 aa24.41■■□□□ 1.5
HLA-F-217ENST00000334668 SLC15A2Q16348 729 aa24.41■■□□□ 1.5
HLA-F-217ENST00000334668 AKT1S1Q96B36 256 aa24.41■■□□□ 1.5
HLA-F-217ENST00000334668 QSER1Q2KHR3 1735 aa24.41■■□□□ 1.5
HLA-F-217ENST00000334668 LOC102724428A0A0B4J2F2 783 aa24.4■■□□□ 1.5
HLA-F-217ENST00000334668 SIK1P57059 783 aa24.4■■□□□ 1.5
HLA-F-217ENST00000334668 STK32BQ9NY57 414 aa24.4■■□□□ 1.5
HLA-F-217ENST00000334668 HMGB2P26583 209 aaKnown RBP24.39■■□□□ 1.49
HLA-F-217ENST00000334668 TUBGCP6Q96RT7 1819 aa24.38■■□□□ 1.49
HLA-F-217ENST00000334668 HTATSF1O43719 755 aaKnown RBP24.38■■□□□ 1.49
HLA-F-217ENST00000334668 ZNF827Q17R98 1081 aa24.38■■□□□ 1.49
HLA-F-217ENST00000334668 CASZ1Q86V15 1759 aa24.38■■□□□ 1.49
HLA-F-217ENST00000334668 NEFMP07197 916 aa24.37■■□□□ 1.49
HLA-F-217ENST00000334668 WDR43Q15061 677 aaKnown RBP eCLIP24.36■■□□□ 1.49
HLA-F-217ENST00000334668 NFE2L2Q16236 605 aa24.36■■□□□ 1.49
HLA-F-217ENST00000334668 SLC4A9Q96Q91 983 aa24.36■■□□□ 1.49
HLA-F-217ENST00000334668 ADAMTS8Q9UP79 889 aa24.36■■□□□ 1.49
HLA-F-217ENST00000334668 CCDC184Q52MB2 194 aa24.35■■□□□ 1.49
HLA-F-217ENST00000334668 CICQ96RK0 1608 aaPredicted RBP24.35■■□□□ 1.49
HLA-F-217ENST00000334668 UBR2Q8IWV8 1755 aa24.34■■□□□ 1.49
HLA-F-217ENST00000334668 C4BP0C0L5 1744 aa24.34■■□□□ 1.49
HLA-F-217ENST00000334668 MAPK8IP3Q9UPT6 1336 aa24.34■■□□□ 1.49
HLA-F-217ENST00000334668 ITPK1Q13572 414 aa24.33■■□□□ 1.49
HLA-F-217ENST00000334668 COL5A3P25940 1745 aaPredicted RBP24.32■■□□□ 1.48
HLA-F-217ENST00000334668 TEFQ10587 303 aa24.32■■□□□ 1.48
HLA-F-217ENST00000334668 RTF1Q92541 710 aaKnown RBP24.32■■□□□ 1.48
HLA-F-217ENST00000334668 ATP6V1AP38606 617 aa24.31■■□□□ 1.48
HLA-F-217ENST00000334668 UBR3Q6ZT12 1888 aa24.31■■□□□ 1.48
HLA-F-217ENST00000334668 MCM10Q7L590 875 aa24.31■■□□□ 1.48
HLA-F-217ENST00000334668 LINC00116Q8NCU8 138 aa24.31■■□□□ 1.48
HLA-F-217ENST00000334668 LRP5O75197 1615 aa24.31■■□□□ 1.48
HLA-F-217ENST00000334668 KCPQ6ZWJ8 1503 aa24.3■■□□□ 1.48
HLA-F-217ENST00000334668 SLC39A6Q13433 755 aa24.3■■□□□ 1.48
HLA-F-217ENST00000334668 RUNDC1Q96C34 613 aa24.3■■□□□ 1.48
HLA-F-217ENST00000334668 RBM42Q9BTD8 480 aaKnown RBP24.3■■□□□ 1.48
HLA-F-217ENST00000334668 PDGFDQ9GZP0 370 aaPredicted RBP24.3■■□□□ 1.48
HLA-F-217ENST00000334668 MYH14Q7Z406 1995 aaKnown RBP24.3■■□□□ 1.48
HLA-F-217ENST00000334668 DCTN1Q14203 1278 aa24.29■■□□□ 1.48
HLA-F-217ENST00000334668 TJP1Q07157 1748 aa24.29■■□□□ 1.48
HLA-F-217ENST00000334668 PTCD1O75127 700 aaKnown RBP24.28■■□□□ 1.48
HLA-F-217ENST00000334668 TMPOP42166 694 aaKnown RBP24.28■■□□□ 1.48
HLA-F-217ENST00000334668 CCDC146Q8IYE0 955 aa24.28■■□□□ 1.48
HLA-F-217ENST00000334668 TFCP2L1Q9NZI6 479 aa24.28■■□□□ 1.48
HLA-F-217ENST00000334668 PNPLA7Q6ZV29 1317 aa24.28■■□□□ 1.48
HLA-F-217ENST00000334668 PNISRQ8TF01 805 aaKnown RBP24.27■■□□□ 1.48
HLA-F-217ENST00000334668 ZNF790Q6PG37 636 aa24.26■■□□□ 1.47
HLA-F-217ENST00000334668 RIPK4P57078 832 aa24.25■■□□□ 1.47
HLA-F-217ENST00000334668 RC3H1Q5TC82 1133 aaKnown RBP24.25■■□□□ 1.47
HLA-F-217ENST00000334668 VSIG10Q8N0Z9 540 aa24.25■■□□□ 1.47
HLA-F-217ENST00000334668 MRS2Q9HD23 443 aa24.25■■□□□ 1.47
HLA-F-217ENST00000334668 BTBD11A6QL63 1104 aa24.23■■□□□ 1.47
HLA-F-217ENST00000334668 TAF7Q15545 349 aaPredicted RBP24.23■■□□□ 1.47
HLA-F-217ENST00000334668 AK7Q96M32 723 aa24.23■■□□□ 1.47
HLA-F-217ENST00000334668 CNTNAP4Q9C0A0 1308 aa24.23■■□□□ 1.47
HLA-F-217ENST00000334668 COL24A1Q17RW2 1714 aa24.23■■□□□ 1.47
HLA-F-217ENST00000334668 ATXN8OSP0DMR3 200 aa24.22■■□□□ 1.47
HLA-F-217ENST00000334668 AMIGO3Q86WK7 504 aa24.22■■□□□ 1.47
HLA-F-217ENST00000334668 TTC5Q8N0Z6 440 aa24.22■■□□□ 1.47
HLA-F-217ENST00000334668 FLAD1Q8NFF5 587 aa24.22■■□□□ 1.47
HLA-F-217ENST00000334668 SLC16A10Q8TF71 515 aa24.22■■□□□ 1.47
HLA-F-217ENST00000334668 COL23A1Q86Y22 540 aaPredicted RBP24.21■■□□□ 1.47
HLA-F-217ENST00000334668 ZNF496Q96IT1 587 aaPredicted RBP24.21■■□□□ 1.47
HLA-F-217ENST00000334668 KCNQ3O43525 872 aa24.2■■□□□ 1.46
HLA-F-217ENST00000334668 LMOD3Q0VAK6 560 aa24.2■■□□□ 1.46
HLA-F-217ENST00000334668 THUMPD2Q9BTF0 503 aaKnown RBP24.2■■□□□ 1.46
HLA-F-217ENST00000334668 MTFR1LQ9H019 292 aa24.2■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms