RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 EN1Q05925 392 aaPredicted RBP34.19■■■■□ 3.06
SMDT1-201ENST00000331479 THUMPD2Q9BTF0 503 aaKnown RBP34.19■■■■□ 3.06
SMDT1-201ENST00000331479 TRIM35Q9UPQ4 493 aa34.19■■■■□ 3.06
SMDT1-201ENST00000331479 BAG6P46379 1132 aa34.18■■■■□ 3.06
SMDT1-201ENST00000331479 ASAP1Q9ULH1 1129 aa34.16■■■■□ 3.06
SMDT1-201ENST00000331479 PLSCR1O15162 318 aa34.15■■■■□ 3.06
SMDT1-201ENST00000331479 TEFQ10587 303 aa34.15■■■■□ 3.06
SMDT1-201ENST00000331479 SIPA1L3O60292 1781 aaPredicted RBP34.15■■■■□ 3.06
SMDT1-201ENST00000331479 CAMKK2Q96RR4 588 aa34.14■■■■□ 3.06
SMDT1-201ENST00000331479 ATG3Q9NT62 314 aa34.14■■■■□ 3.06
SMDT1-201ENST00000331479 LMOD3Q0VAK6 560 aa34.13■■■■□ 3.05
SMDT1-201ENST00000331479 EZH2Q15910 746 aaKnown RBP34.13■■■■□ 3.05
SMDT1-201ENST00000331479 PROM2Q8N271 834 aa34.11■■■■□ 3.05
SMDT1-201ENST00000331479 RGPD3A6NKT7 1758 aaPredicted RBP34.1■■■■□ 3.05
SMDT1-201ENST00000331479 RGPD4Q7Z3J3 1758 aa34.1■■■■□ 3.05
SMDT1-201ENST00000331479 PALLDQ8WX93 1383 aa34.09■■■■□ 3.05
SMDT1-201ENST00000331479 SLC39A6Q13433 755 aa34.09■■■■□ 3.05
SMDT1-201ENST00000331479 SMARCC1Q92922 1105 aaPredicted RBP34.07■■■■□ 3.05
SMDT1-201ENST00000331479 SALL2Q9Y467 1007 aaPredicted RBP34.07■■■■□ 3.05
SMDT1-201ENST00000331479 LY75O60449 1722 aa34.07■■■■□ 3.04
SMDT1-201ENST00000331479 PAPPAQ13219 1627 aa34.06■■■■□ 3.04
SMDT1-201ENST00000331479 TXNRD1Q16881 649 aa34.06■■■■□ 3.04
SMDT1-201ENST00000331479 TAF7Q15545 349 aaPredicted RBP34.05■■■■□ 3.04
SMDT1-201ENST00000331479 BTBD11A6QL63 1104 aa34.04■■■■□ 3.04
SMDT1-201ENST00000331479 MIS18AQ9NYP9 233 aa34.04■■■■□ 3.04
SMDT1-201ENST00000331479 KCNQ4P56696 695 aa34.03■■■■□ 3.04
SMDT1-201ENST00000331479 CCDC27Q2M243 656 aa34.02■■■■□ 3.04
SMDT1-201ENST00000331479 KCNQ3O43525 872 aa34.02■■■■□ 3.04
SMDT1-201ENST00000331479 NCBP3Q53F19 620 aaKnown RBP34.02■■■■□ 3.04
SMDT1-201ENST00000331479 LRRC4BQ9NT99 713 aa34.02■■■■□ 3.04
SMDT1-201ENST00000331479 RREB1Q92766 1687 aa34.01■■■■□ 3.04
SMDT1-201ENST00000331479 ZNF790Q6PG37 636 aa34.01■■■■□ 3.03
SMDT1-201ENST00000331479 WWC1Q8IX03 1113 aa34.01■■■■□ 3.03
SMDT1-201ENST00000331479 PTCD1O75127 700 aaKnown RBP34■■■■□ 3.03
SMDT1-201ENST00000331479 LOC102724428A0A0B4J2F2 783 aa33.99■■■■□ 3.03
SMDT1-201ENST00000331479 SIK1P57059 783 aa33.99■■■■□ 3.03
SMDT1-201ENST00000331479 SLC4A9Q96Q91 983 aa33.99■■■■□ 3.03
SMDT1-201ENST00000331479 RBM42Q9BTD8 480 aaKnown RBP33.99■■■■□ 3.03
SMDT1-201ENST00000331479 CCNL1Q9UK58 526 aaPredicted RBP33.98■■■■□ 3.03
SMDT1-201ENST00000331479 KCPQ6ZWJ8 1503 aa33.98■■■■□ 3.03
SMDT1-201ENST00000331479 UBR2Q8IWV8 1755 aa33.97■■■■□ 3.03
SMDT1-201ENST00000331479 SLC27A3Q5K4L6 730 aa33.97■■■■□ 3.03
SMDT1-201ENST00000331479 NUP188Q5SRE5 1749 aa33.96■■■■□ 3.03
SMDT1-201ENST00000331479 TTC5Q8N0Z6 440 aa33.96■■■■□ 3.03
SMDT1-201ENST00000331479 KDM3BQ7LBC6 1761 aa33.95■■■■□ 3.02
SMDT1-201ENST00000331479 ZNF496Q96IT1 587 aaPredicted RBP33.94■■■■□ 3.02
SMDT1-201ENST00000331479 LAS1LQ9Y4W2 734 aaKnown RBP33.94■■■■□ 3.02
SMDT1-201ENST00000331479 ATP6V1AP38606 617 aa33.93■■■■□ 3.02
SMDT1-201ENST00000331479 NGEFQ8N5V2 710 aa33.93■■■■□ 3.02
SMDT1-201ENST00000331479 TSPYL4Q9UJ04 414 aa33.93■■■■□ 3.02
SMDT1-201ENST00000331479 ITPK1Q13572 414 aa33.92■■■■□ 3.02
SMDT1-201ENST00000331479 CHL1O00533 1208 aa33.91■■■■□ 3.02
SMDT1-201ENST00000331479 CALD1Q05682 793 aaKnown RBP33.9■■■■□ 3.02
SMDT1-201ENST00000331479 ZNF853P0CG23 659 aa33.89■■■■□ 3.02
SMDT1-201ENST00000331479 CFAP44Q96MT7 982 aa33.89■■■■□ 3.02
SMDT1-201ENST00000331479 BABAM1Q9NWV8 329 aa33.89■■■■□ 3.02
SMDT1-201ENST00000331479 ZNF831Q5JPB2 1677 aa33.89■■■■□ 3.02
SMDT1-201ENST00000331479 TAF1LQ8IZX4 1826 aa33.88■■■■□ 3.01
SMDT1-201ENST00000331479 C5P01031 1676 aa33.88■■■■□ 3.01
SMDT1-201ENST00000331479 FMNL2Q96PY5 1086 aa33.88■■■■□ 3.01
SMDT1-201ENST00000331479 IFT57Q9NWB7 429 aa33.88■■■■□ 3.01
SMDT1-201ENST00000331479 ZNF521Q96K83 1311 aa33.88■■■■□ 3.01
SMDT1-201ENST00000331479 HEG1Q9ULI3 1381 aa33.87■■■■□ 3.01
SMDT1-201ENST00000331479 TJP1Q07157 1748 aa33.87■■■■□ 3.01
SMDT1-201ENST00000331479 WDR63Q8IWG1 891 aa33.86■■■■□ 3.01
SMDT1-201ENST00000331479 LINC00116Q8NCU8 138 aa33.86■■■■□ 3.01
SMDT1-201ENST00000331479 ANO8Q9HCE9 1232 aaPredicted RBP33.86■■■■□ 3.01
SMDT1-201ENST00000331479 EIF4A1P60842 406 aaKnown RBP33.85■■■■□ 3.01
SMDT1-201ENST00000331479 DNAJC10Q8IXB1 793 aa33.85■■■■□ 3.01
SMDT1-201ENST00000331479 MBIPQ9NS73 344 aa33.85■■■■□ 3.01
SMDT1-201ENST00000331479 GNAI1P63096 354 aa33.84■■■■□ 3.01
SMDT1-201ENST00000331479 VSIG10Q8N0Z9 540 aa33.84■■■■□ 3.01
SMDT1-201ENST00000331479 IL16Q14005 1332 aa33.83■■■■□ 3.01
SMDT1-201ENST00000331479 CICQ96RK0 1608 aaPredicted RBP33.83■■■■□ 3.01
SMDT1-201ENST00000331479 PRAMEF22A3QJZ6 481 aa33.82■■■■□ 3
SMDT1-201ENST00000331479 HNRNPUQ00839 825 aaKnown RBP eCLIP33.82■■■■□ 3
SMDT1-201ENST00000331479 SPINK5Q9NQ38 1064 aaPredicted RBP33.82■■■■□ 3
SMDT1-201ENST00000331479 COL5A3P25940 1745 aaPredicted RBP33.82■■■■□ 3
SMDT1-201ENST00000331479 ZNF827Q17R98 1081 aa33.81■■■■□ 3
SMDT1-201ENST00000331479 C4BP0C0L5 1744 aa33.81■■■■□ 3
SMDT1-201ENST00000331479 AKT1S1Q96B36 256 aa33.8■■■■□ 3
SMDT1-201ENST00000331479 TSR2Q969E8 191 aaKnown RBP33.79■■■■□ 3
SMDT1-201ENST00000331479 KRT24Q2M2I5 525 aa33.78■■■■□ 3
SMDT1-201ENST00000331479 NBPF14Q5TI25 921 aa33.78■■■■□ 3
SMDT1-201ENST00000331479 SNRPA1P09661 255 aaKnown RBP33.77■■■■□ 3
SMDT1-201ENST00000331479 GIGYF1O75420 1035 aaPredicted RBP33.77■■■■□ 3
SMDT1-201ENST00000331479 CYP19A1P11511 503 aaPredicted RBP33.77■■■■□ 3
SMDT1-201ENST00000331479 SLC15A2Q16348 729 aa33.76■■■□□ 2.99
SMDT1-201ENST00000331479 STK32BQ9NY57 414 aa33.76■■■□□ 2.99
SMDT1-201ENST00000331479 USP16Q9Y5T5 823 aa33.76■■■□□ 2.99
SMDT1-201ENST00000331479 MYH14Q7Z406 1995 aaKnown RBP33.74■■■□□ 2.99
SMDT1-201ENST00000331479 CRKLP46109 303 aaKnown RBP33.73■■■□□ 2.99
SMDT1-201ENST00000331479 TEX13AQ9BXU3 409 aaPredicted RBP33.73■■■□□ 2.99
SMDT1-201ENST00000331479 GOLGA2Q08379 1002 aa33.72■■■□□ 2.99
SMDT1-201ENST00000331479 CNTNAP4Q9C0A0 1308 aa33.72■■■□□ 2.99
SMDT1-201ENST00000331479 FANCIQ9NVI1 1328 aa33.72■■■□□ 2.99
SMDT1-201ENST00000331479 HMGB2P26583 209 aaKnown RBP33.72■■■□□ 2.99
SMDT1-201ENST00000331479 R3HDM1Q15032 1099 aaKnown RBP33.72■■■□□ 2.99
SMDT1-201ENST00000331479 INTS5Q6P9B9 1019 aaKnown RBP33.72■■■□□ 2.99
SMDT1-201ENST00000331479 AMIGO3Q86WK7 504 aa33.72■■■□□ 2.99
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms