RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 PLCB2Q00722 1185 aa29.26■■■□□ 2.28
SOX1-201ENST00000330949 TSPYL6Q8N831 410 aa29.26■■■□□ 2.28
SOX1-201ENST00000330949 IPO4Q8TEX9 1081 aaKnown RBP29.26■■■□□ 2.28
SOX1-201ENST00000330949 CCDC66A2RUB6 948 aa29.26■■■□□ 2.27
SOX1-201ENST00000330949 PRKAR2BP31323 418 aa29.26■■■□□ 2.27
SOX1-201ENST00000330949 HDGFL2Q7Z4V5 671 aaPredicted RBP29.26■■■□□ 2.27
SOX1-201ENST00000330949 RPAP2Q8IXW5 612 aaPredicted RBP29.26■■■□□ 2.27
SOX1-201ENST00000330949 SMARCA5O60264 1052 aaPredicted RBP29.26■■■□□ 2.27
SOX1-201ENST00000330949 FOXD4L6Q3SYB3 417 aaPredicted RBP29.26■■■□□ 2.27
SOX1-201ENST00000330949 FOXD4L3Q6VB84 417 aaPredicted RBP29.26■■■□□ 2.27
SOX1-201ENST00000330949 GNAI1P63096 354 aa29.25■■■□□ 2.27
SOX1-201ENST00000330949 ANAPC15P60006 121 aa29.24■■■□□ 2.27
SOX1-201ENST00000330949 DDX41Q9UJV9 622 aaKnown RBP29.24■■■□□ 2.27
SOX1-201ENST00000330949 RTL1A6NKG5 1358 aa29.24■■■□□ 2.27
SOX1-201ENST00000330949 UBE2HP62256 183 aa29.23■■■□□ 2.27
SOX1-201ENST00000330949 IFT57Q9NWB7 429 aa29.23■■■□□ 2.27
SOX1-201ENST00000330949 SLFN14P0C7P3 912 aa29.22■■■□□ 2.27
SOX1-201ENST00000330949 LRRC7Q96NW7 1537 aa29.22■■■□□ 2.27
SOX1-201ENST00000330949 NEO1Q92859 1461 aa29.22■■■□□ 2.27
SOX1-201ENST00000330949 ATP10DQ9P241 1426 aa29.22■■■□□ 2.27
SOX1-201ENST00000330949 TWISTNBQ3B726 338 aaPredicted RBP29.21■■■□□ 2.27
SOX1-201ENST00000330949 SMTNL1A8MU46 457 aa29.21■■■□□ 2.27
SOX1-201ENST00000330949 PHACTR3Q96KR7 559 aa29.21■■■□□ 2.27
SOX1-201ENST00000330949 ZRANB1Q9UGI0 708 aa29.21■■■□□ 2.27
SOX1-201ENST00000330949 ATAD2Q6PL18 1390 aa29.21■■■□□ 2.27
SOX1-201ENST00000330949 BCL11BQ9C0K0 894 aaPredicted RBP29.21■■■□□ 2.27
SOX1-201ENST00000330949 RGS12O14924 1447 aa29.2■■■□□ 2.27
SOX1-201ENST00000330949 PNPLA6Q8IY17 1366 aa29.2■■■□□ 2.27
SOX1-201ENST00000330949 ANKRD26Q9UPS8 1709 aa29.2■■■□□ 2.27
SOX1-201ENST00000330949 MORC2Q9Y6X9 1032 aaPredicted RBP29.2■■■□□ 2.27
SOX1-201ENST00000330949 PTPRMP28827 1452 aa29.2■■■□□ 2.26
SOX1-201ENST00000330949 FAM135BQ49AJ0 1406 aa29.19■■■□□ 2.26
SOX1-201ENST00000330949 FUCA2Q9BTY2 467 aa29.19■■■□□ 2.26
SOX1-201ENST00000330949 CD163L1Q9NR16 1453 aa29.19■■■□□ 2.26
SOX1-201ENST00000330949 YTHDC2Q9H6S0 1430 aaKnown RBP29.19■■■□□ 2.26
SOX1-201ENST00000330949 EMILIN1Q9Y6C2 1016 aa29.19■■■□□ 2.26
SOX1-201ENST00000330949 RPAP1Q9BWH6 1393 aaPredicted RBP29.19■■■□□ 2.26
SOX1-201ENST00000330949 CDC42BPGQ6DT37 1551 aa29.19■■■□□ 2.26
SOX1-201ENST00000330949 NCKAP5LQ9HCH0 1330 aa29.18■■■□□ 2.26
SOX1-201ENST00000330949 SRCIN1Q9C0H9 1055 aa29.18■■■□□ 2.26
SOX1-201ENST00000330949 NOL8Q76FK4 1167 aaKnown RBP29.18■■■□□ 2.26
SOX1-201ENST00000330949 CEP85Q6P2H3 762 aa29.17■■■□□ 2.26
SOX1-201ENST00000330949 OSBPL3Q9H4L5 887 aa29.17■■■□□ 2.26
SOX1-201ENST00000330949 SPC24Q8NBT2 197 aa29.17■■■□□ 2.26
SOX1-201ENST00000330949 NFE2L2Q16236 605 aa29.16■■■□□ 2.26
SOX1-201ENST00000330949 MBIPQ9NS73 344 aa29.16■■■□□ 2.26
SOX1-201ENST00000330949 TERF2Q15554 542 aa29.16■■■□□ 2.26
SOX1-201ENST00000330949 APBB1O00213 710 aa29.15■■■□□ 2.26
SOX1-201ENST00000330949 AP5Z1O43299 807 aa29.15■■■□□ 2.26
SOX1-201ENST00000330949 CNPY2Q9Y2B0 182 aa29.15■■■□□ 2.26
SOX1-201ENST00000330949 PAXBP1Q9Y5B6 917 aa29.15■■■□□ 2.26
SOX1-201ENST00000330949 ZNF853P0CG23 659 aa29.14■■■□□ 2.26
SOX1-201ENST00000330949 KCNJ4P48050 445 aa29.14■■■□□ 2.26
SOX1-201ENST00000330949 FAM69CQ0P6D2 419 aa29.14■■■□□ 2.26
SOX1-201ENST00000330949 ESYT1Q9BSJ8 1104 aa29.14■■■□□ 2.26
SOX1-201ENST00000330949 ZBTB22O15209 634 aa29.14■■■□□ 2.26
SOX1-201ENST00000330949 IRX5P78411 483 aaPredicted RBP29.14■■■□□ 2.26
SOX1-201ENST00000330949 POLKQ9UBT6 870 aa29.14■■■□□ 2.26
SOX1-201ENST00000330949 RICTORQ6R327 1708 aa29.14■■■□□ 2.25
SOX1-201ENST00000330949 KRT222Q8N1A0 295 aa29.13■■■□□ 2.25
SOX1-201ENST00000330949 KIF18AQ8NI77 898 aa29.13■■■□□ 2.25
SOX1-201ENST00000330949 TIGD1Q96MW7 591 aa29.13■■■□□ 2.25
SOX1-201ENST00000330949 PALD1Q9ULE6 856 aa29.13■■■□□ 2.25
SOX1-201ENST00000330949 IL17RAQ96F46 866 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 VGLL3A8MV65 326 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 SLC20A2Q08357 652 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 ATP6V1DQ9Y5K8 247 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 TMEM131LA2VDJ0 1609 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 ARHGEF40Q8TER5 1519 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 PDE1AP54750 535 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 GIMAP6Q6P9H5 292 aa29.12■■■□□ 2.25
SOX1-201ENST00000330949 ZFYVE9O95405 1425 aa29.11■■■□□ 2.25
SOX1-201ENST00000330949 SSH2Q76I76 1423 aa29.11■■■□□ 2.25
SOX1-201ENST00000330949 RRS1Q15050 365 aaKnown RBP29.11■■■□□ 2.25
SOX1-201ENST00000330949 NME9Q86XW9 330 aa29.11■■■□□ 2.25
SOX1-201ENST00000330949 CCDC112Q8NEF3 446 aa29.11■■■□□ 2.25
SOX1-201ENST00000330949 ZSCAN22P10073 491 aaPredicted RBP29.1■■■□□ 2.25
SOX1-201ENST00000330949 DCTN1Q14203 1278 aa29.1■■■□□ 2.25
SOX1-201ENST00000330949 FAM83GA6ND36 823 aa29.09■■■□□ 2.25
SOX1-201ENST00000330949 CCDC192P0DO97 292 aa29.09■■■□□ 2.25
SOX1-201ENST00000330949 PTGS1P23219 599 aa29.09■■■□□ 2.25
SOX1-201ENST00000330949 FAM193AP78312 1265 aa29.09■■■□□ 2.25
SOX1-201ENST00000330949 C16orf45Q96MC5 204 aaPredicted RBP29.09■■■□□ 2.25
SOX1-201ENST00000330949 NUTM2FA1L443 756 aa29.09■■■□□ 2.25
SOX1-201ENST00000330949 C8orf58Q8NAV2 365 aa29.09■■■□□ 2.25
SOX1-201ENST00000330949 DNAJC2Q99543 621 aaKnown RBP29.08■■■□□ 2.25
SOX1-201ENST00000330949 ANO2Q9NQ90 1003 aa29.08■■■□□ 2.25
SOX1-201ENST00000330949 HMMRO75330 724 aa29.08■■■□□ 2.25
SOX1-201ENST00000330949 TNNT1P13805 278 aa29.08■■■□□ 2.25
SOX1-201ENST00000330949 PREX1Q8TCU6 1659 aa29.07■■■□□ 2.24
SOX1-201ENST00000330949 CALCOCO1Q9P1Z2 691 aa29.07■■■□□ 2.24
SOX1-201ENST00000330949 PDIA4P13667 645 aaKnown RBP29.06■■■□□ 2.24
SOX1-201ENST00000330949 TPRNQ4KMQ1 711 aa29.06■■■□□ 2.24
SOX1-201ENST00000330949 TXNDC2Q86VQ3 553 aa29.06■■■□□ 2.24
SOX1-201ENST00000330949 UPF3BQ9BZI7 483 aaKnown RBP29.06■■■□□ 2.24
SOX1-201ENST00000330949 SOX12O15370 315 aa29.06■■■□□ 2.24
SOX1-201ENST00000330949 CREBRFQ8IUR6 639 aa29.05■■■□□ 2.24
SOX1-201ENST00000330949 FIBPO43427 364 aa29.05■■■□□ 2.24
SOX1-201ENST00000330949 FAM200AQ8TCP9 573 aa29.05■■■□□ 2.24
SOX1-201ENST00000330949 ZNF397Q8NF99 534 aaPredicted RBP29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 145.1 ms