RNA–Protein interactions for RNA: ENST00000324106.8

CD28-201, Transcript of CD28 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD28, Length 4,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD28-201ENST00000324106 SPTY2D1Q68D10 685 aaPredicted RBP10.62□□□□□ -0.71
CD28-201ENST00000324106 MCM10Q7L590 875 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 NUP133Q8WUM0 1156 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 DNAAF4Q8WXU2 420 aa10.62□□□□□ -0.71
CD28-201ENST00000324106 ZFYVE27Q5T4F4 411 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 TBX22Q9Y458 520 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 PCF11O94913 1555 aaKnown RBP10.61□□□□□ -0.71
CD28-201ENST00000324106 GPS2Q13227 327 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 FILIP1LQ4L180 1135 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 NBPF6Q5VWK0 638 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 NBPF5PQ86XG9 351 aaPredicted RBP10.61□□□□□ -0.71
CD28-201ENST00000324106 NBPF4Q96M43 638 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 MAGEC2Q9UBF1 373 aaPredicted RBP10.61□□□□□ -0.71
CD28-201ENST00000324106 EMILIN1Q9Y6C2 1016 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 AEBP1Q8IUX7 1158 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 ZNF622Q969S3 477 aaKnown RBP eCLIP10.61□□□□□ -0.71
CD28-201ENST00000324106 CCDC196A0A1B0GTZ2 297 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 U3KPZ7 1027 aaPredicted RBP10.61□□□□□ -0.71
CD28-201ENST00000324106 RIMS2Q9UQ26 1411 aa10.61□□□□□ -0.71
CD28-201ENST00000324106 BAG3O95817 575 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 RNF41Q9H4P4 317 aaPredicted RBP10.6□□□□□ -0.71
CD28-201ENST00000324106 C1orf115Q9H7X2 142 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 UHRF1BP1Q6BDS2 1440 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 PTPN23Q9H3S7 1636 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 HSPA2P54652 639 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 ATP10BO94823 1461 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 CCAR2Q8N163 923 aaKnown RBP10.6□□□□□ -0.71
CD28-201ENST00000324106 CWC25Q9NXE8 425 aaPredicted RBP10.6□□□□□ -0.71
CD28-201ENST00000324106 SEC63Q9UGP8 760 aaKnown RBP10.6□□□□□ -0.71
CD28-201ENST00000324106 HDAC9Q9UKV0 1011 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 PDZRN3Q9UPQ7 1066 aa10.6□□□□□ -0.71
CD28-201ENST00000324106 NAP1L1P55209 391 aaKnown RBP10.59□□□□□ -0.71
CD28-201ENST00000324106 IQCA1Q86XH1 822 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 ZNF444Q8N0Y2 327 aaPredicted RBP10.59□□□□□ -0.71
CD28-201ENST00000324106 ZSCAN31Q96LW9 406 aaPredicted RBP10.59□□□□□ -0.71
CD28-201ENST00000324106 ANKRD36BQ8N2N9 1353 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 MBD3O95983 291 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 SETDB2Q96T68 719 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 NAPBQ9H115 298 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 PDCL3Q9H2J4 239 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 EHMT1Q9H9B1 1298 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 CABP5Q9NP86 173 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 HLA-DOAP06340 250 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 IL2RBP14784 551 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 TRAF1Q13077 416 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 PPP4R3BQ5MIZ7 849 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 NLRP3Q96P20 1036 aa10.59□□□□□ -0.71
CD28-201ENST00000324106 LUC7LQ9NQ29 371 aaKnown RBP10.59□□□□□ -0.71
CD28-201ENST00000324106 GPATCH8Q9UKJ3 1502 aaKnown RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 DESP17661 470 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 CCDC152Q4G0S7 254 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 OGFOD1Q8N543 542 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 FAM13BQ9NYF5 915 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 LETM1O95202 739 aaPredicted RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 TTF1Q15361 905 aaPredicted RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 WDR78Q5VTH9 848 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 LDHAL6AQ6ZMR3 332 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 MPHOSPH6Q99547 160 aaKnown RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 FEZ1Q99689 392 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 ZBTB3Q9H5J0 574 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 DUOX2Q9NRD8 1548 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 NF2P35240 595 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 CDR1P51861 262 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 HOMER1Q86YM7 354 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 PUS7Q96PZ0 661 aaKnown RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 NYXQ9GZU5 481 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 DACH1Q9UI36 760 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 C11orf95C9JLR9 678 aaPredicted RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 PPP4R3AQ6IN85 833 aa10.58□□□□□ -0.72
CD28-201ENST00000324106 CTCFLQ8NI51 663 aaPredicted RBP10.58□□□□□ -0.72
CD28-201ENST00000324106 PTPRCP08575 1304 aa10.57□□□□□ -0.72
CD28-201ENST00000324106 GPTP24298 496 aa10.57□□□□□ -0.72
CD28-201ENST00000324106 ZGPATQ8N5A5 531 aaKnown RBP10.57□□□□□ -0.72
CD28-201ENST00000324106 CUL5Q93034 780 aa10.57□□□□□ -0.72
CD28-201ENST00000324106 ZNF219Q9P2Y4 722 aaPredicted RBP10.57□□□□□ -0.72
CD28-201ENST00000324106 BCAR3O75815 825 aa10.57□□□□□ -0.72
CD28-201ENST00000324106 DHX8Q14562 1220 aaKnown RBP10.57□□□□□ -0.72
CD28-201ENST00000324106 C16orf71Q8IYS4 520 aaPredicted RBP10.57□□□□□ -0.72
CD28-201ENST00000324106 IL1RAPL2Q9NP60 686 aa10.57□□□□□ -0.72
CD28-201ENST00000324106 ZMYM3Q14202 1370 aa10.57□□□□□ -0.72
CD28-201ENST00000324106 GSTO1P78417 241 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 SMARCE1Q969G3 411 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 MIS18AQ9NYP9 233 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 KIF13AQ9H1H9 1805 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 CHD1LQ86WJ1 897 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 ZHX3Q9H4I2 956 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 TFCP2L1Q9NZI6 479 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 RTCBQ9Y3I0 505 aaKnown RBP10.56□□□□□ -0.72
CD28-201ENST00000324106 ATP6V1AP38606 617 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 TXLNBQ8N3L3 684 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 UQCRFS1P1P0C7P4 283 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 STK32BQ9NY57 414 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 MYO6Q9UM54 1294 aa10.56□□□□□ -0.72
CD28-201ENST00000324106 TPTE2Q6XPS3 522 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 STK11IPQ8N1F8 1099 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 JDP2Q8WYK2 163 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 RAB34Q9BZG1 259 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 PARP3Q9Y6F1 533 aa10.55□□□□□ -0.72
CD28-201ENST00000324106 MINDY4BA8MYZ0 360 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms