RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 WDR33Q9C0J8 1336 aaKnown RBP9.41□□□□□ -0.9
CD46-201ENST00000322875 GDPD2Q9HCC8 539 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 CPSF1Q10570 1443 aaKnown RBP9.41□□□□□ -0.9
CD46-201ENST00000322875 SMTNL1A8MU46 457 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 FYB1O15117 783 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 DIAPH1O60610 1272 aaKnown RBP9.41□□□□□ -0.9
CD46-201ENST00000322875 CHAF1AQ13111 956 aaPredicted RBP9.41□□□□□ -0.9
CD46-201ENST00000322875 KIF18AQ8NI77 898 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 SRCIN1Q9C0H9 1055 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 PALD1Q9ULE6 856 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 PREX1Q8TCU6 1659 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 ZBTB22O15209 634 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 UBE2HP62256 183 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 FAM193AP78312 1265 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 MBIPQ9NS73 344 aa9.41□□□□□ -0.9
CD46-201ENST00000322875 ABCC3O15438 1527 aa9.4□□□□□ -0.9
CD46-201ENST00000322875 NFE2L2Q16236 605 aa9.4□□□□□ -0.9
CD46-201ENST00000322875 ZNF771Q7L3S4 317 aaPredicted RBP9.4□□□□□ -0.9
CD46-201ENST00000322875 BCL11BQ9C0K0 894 aaPredicted RBP9.4□□□□□ -0.9
CD46-201ENST00000322875 VGFO15240 615 aaPredicted RBP9.39□□□□□ -0.91
CD46-201ENST00000322875 GNAI1P63096 354 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 ESYT1Q9BSJ8 1104 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 CDK12Q9NYV4 1490 aaPredicted RBP9.39□□□□□ -0.91
CD46-201ENST00000322875 EPB41L2O43491 1005 aaKnown RBP9.39□□□□□ -0.91
CD46-201ENST00000322875 C8orf58Q8NAV2 365 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 NEXMIFQ5QGS0 1516 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 PDE1AP54750 535 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 TWISTNBQ3B726 338 aaPredicted RBP9.39□□□□□ -0.91
CD46-201ENST00000322875 AFAP1Q8N556 730 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 PHACTR3Q96KR7 559 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 GGNBP2Q9H3C7 697 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 CNPY2Q9Y2B0 182 aa9.39□□□□□ -0.91
CD46-201ENST00000322875 RPGRIP1LQ68CZ1 1315 aa9.38□□□□□ -0.91
CD46-201ENST00000322875 TMEM132EQ6IEE7 984 aa9.38□□□□□ -0.91
CD46-201ENST00000322875 PRKAR2BP31323 418 aa9.37□□□□□ -0.91
CD46-201ENST00000322875 PAXBP1Q9Y5B6 917 aa9.37□□□□□ -0.91
CD46-201ENST00000322875 ZSCAN22P10073 491 aaPredicted RBP9.37□□□□□ -0.91
CD46-201ENST00000322875 CABP2Q9NPB3 220 aa9.37□□□□□ -0.91
CD46-201ENST00000322875 CREBRFQ8IUR6 639 aa9.37□□□□□ -0.91
CD46-201ENST00000322875 THUMPD2Q9BTF0 503 aaKnown RBP9.37□□□□□ -0.91
CD46-201ENST00000322875 PTPRMP28827 1452 aa9.37□□□□□ -0.91
CD46-201ENST00000322875 KIDINS220Q9ULH0 1771 aa9.37□□□□□ -0.91
CD46-201ENST00000322875 MSH6P52701 1360 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 GOLGA6L6A8MZA4 724 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 CAPN2P17655 700 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 PTGS1P23219 599 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 NAA30Q147X3 362 aaPredicted RBP9.36□□□□□ -0.91
CD46-201ENST00000322875 ERBB3P21860 1342 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 RIMS2Q9UQ26 1411 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 CCDC66A2RUB6 948 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 GIMAP6Q6P9H5 292 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 PLA2G4DQ86XP0 818 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 KRT222Q8N1A0 295 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 TTC14Q96N46 770 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 CRYBG1Q9Y4K1 1723 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 MAP2P11137 1827 aaKnown RBP9.36□□□□□ -0.91
CD46-201ENST00000322875 NPATQ14207 1427 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 CHMLP26374 656 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 SLFNL1Q499Z3 407 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 KMT5BQ4FZB7 885 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 KIF1BPQ96EK5 621 aa9.36□□□□□ -0.91
CD46-201ENST00000322875 VGLL3A8MV65 326 aa9.35□□□□□ -0.91
CD46-201ENST00000322875 KIF3BO15066 747 aa9.35□□□□□ -0.91
CD46-201ENST00000322875 KCNJ4P48050 445 aa9.35□□□□□ -0.91
CD46-201ENST00000322875 TIGD1Q96MW7 591 aa9.35□□□□□ -0.91
CD46-201ENST00000322875 SETD1AO15047 1707 aaKnown RBP9.35□□□□□ -0.91
CD46-201ENST00000322875 F13A1P00488 732 aa9.35□□□□□ -0.91
CD46-201ENST00000322875 PDIA4P13667 645 aaKnown RBP9.35□□□□□ -0.91
CD46-201ENST00000322875 RBM6P78332 1123 aaKnown RBP9.35□□□□□ -0.91
CD46-201ENST00000322875 ZNF397Q8NF99 534 aaPredicted RBP9.35□□□□□ -0.91
CD46-201ENST00000322875 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
CD46-201ENST00000322875 MCCP23508 829 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 HSPA4P34932 840 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.34□□□□□ -0.91
CD46-201ENST00000322875 FAM200AQ8TCP9 573 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 SIGLEC1Q9BZZ2 1709 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 N4BP2Q86UW6 1770 aaPredicted RBP9.34□□□□□ -0.91
CD46-201ENST00000322875 AATKQ6ZMQ8 1374 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 HECW2Q9P2P5 1572 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 SYT1P21579 422 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 KRT24Q2M2I5 525 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 ZSCAN25Q6NSZ9 544 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 SPC24Q8NBT2 197 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 STAP2Q9UGK3 403 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 MRVI1Q9Y6F6 885 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 ELL2O00472 640 aaPredicted RBP9.34□□□□□ -0.91
CD46-201ENST00000322875 STX6O43752 255 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 TNNT1P13805 278 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 FOXD4L6Q3SYB3 417 aaPredicted RBP9.34□□□□□ -0.91
CD46-201ENST00000322875 FOXD4L3Q6VB84 417 aaPredicted RBP9.34□□□□□ -0.91
CD46-201ENST00000322875 RBM43Q6ZSC3 357 aaKnown RBP9.34□□□□□ -0.91
CD46-201ENST00000322875 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 POLKQ9UBT6 870 aa9.34□□□□□ -0.91
CD46-201ENST00000322875 KDM4FA0A1W2PPD8 638 aa9.33□□□□□ -0.92
CD46-201ENST00000322875 LRMPQ12912 555 aa9.33□□□□□ -0.92
CD46-201ENST00000322875 RICTORQ6R327 1708 aa9.33□□□□□ -0.92
CD46-201ENST00000322875 NYAP1Q6ZVC0 841 aa9.33□□□□□ -0.92
CD46-201ENST00000322875 MEIS3Q99687 375 aa9.33□□□□□ -0.92
CD46-201ENST00000322875 PTPRCP08575 1304 aa9.33□□□□□ -0.92
CD46-201ENST00000322875 CCDC192P0DO97 292 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms