RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 GPT2Q8TD30 523 aa19.66■□□□□ 0.74
CRAT-201ENST00000318080 STRCQ7RTU9 1775 aa19.66■□□□□ 0.74
CRAT-201ENST00000318080 CHMP4BQ9H444 224 aaKnown RBP19.66■□□□□ 0.74
CRAT-201ENST00000318080 STRCP1A6NGW2 1772 aa19.66■□□□□ 0.74
CRAT-201ENST00000318080 ACEP12821 1306 aa19.66■□□□□ 0.74
CRAT-201ENST00000318080 SYCE3A1L190 88 aa19.66■□□□□ 0.74
CRAT-201ENST00000318080 CYP2E1P05181 493 aaPredicted RBP19.66■□□□□ 0.74
CRAT-201ENST00000318080 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
CRAT-201ENST00000318080 ZDHHC9Q9Y397 364 aa19.66■□□□□ 0.74
CRAT-201ENST00000318080 NOL7Q9UMY1 257 aaKnown RBP19.65■□□□□ 0.74
CRAT-201ENST00000318080 CDC42BPGQ6DT37 1551 aa19.65■□□□□ 0.74
CRAT-201ENST00000318080 PTMSP20962 102 aa19.64■□□□□ 0.73
CRAT-201ENST00000318080 AEBP1Q8IUX7 1158 aa19.64■□□□□ 0.73
CRAT-201ENST00000318080 CPSF1Q10570 1443 aaKnown RBP19.63■□□□□ 0.73
CRAT-201ENST00000318080 ZNF830Q96NB3 372 aaPredicted RBP19.63■□□□□ 0.73
CRAT-201ENST00000318080 MAP2P11137 1827 aaKnown RBP19.63■□□□□ 0.73
CRAT-201ENST00000318080 CEP85Q6P2H3 762 aa19.62■□□□□ 0.73
CRAT-201ENST00000318080 TMEM63CQ9P1W3 806 aa19.62■□□□□ 0.73
CRAT-201ENST00000318080 C17orf53Q8N3J3 647 aaPredicted RBP19.62■□□□□ 0.73
CRAT-201ENST00000318080 ANKRD44Q8N8A2 993 aa19.62■□□□□ 0.73
CRAT-201ENST00000318080 MEIS3Q99687 375 aa19.62■□□□□ 0.73
CRAT-201ENST00000318080 ZNF335Q9H4Z2 1342 aaPredicted RBP19.62■□□□□ 0.73
CRAT-201ENST00000318080 ZNF445P59923 1031 aa19.61■□□□□ 0.73
CRAT-201ENST00000318080 ATP10DQ9P241 1426 aa19.61■□□□□ 0.73
CRAT-201ENST00000318080 KIF20BQ96Q89 1820 aa19.61■□□□□ 0.73
CRAT-201ENST00000318080 TSHZ3Q63HK5 1081 aa19.61■□□□□ 0.73
CRAT-201ENST00000318080 NUCB2P80303 420 aa19.6■□□□□ 0.73
CRAT-201ENST00000318080 INTS3Q68E01 1043 aaKnown RBP19.6■□□□□ 0.73
CRAT-201ENST00000318080 MCM10Q7L590 875 aa19.6■□□□□ 0.73
CRAT-201ENST00000318080 ZKSCAN5Q9Y2L8 839 aa19.6■□□□□ 0.73
CRAT-201ENST00000318080 NGDNQ8NEJ9 315 aaKnown RBP19.59■□□□□ 0.73
CRAT-201ENST00000318080 ZNF500O60304 480 aaPredicted RBP19.59■□□□□ 0.73
CRAT-201ENST00000318080 ORAI2Q96SN7 254 aa19.59■□□□□ 0.73
CRAT-201ENST00000318080 TOPAZ1Q8N9V7 1692 aa19.59■□□□□ 0.73
CRAT-201ENST00000318080 TMEM94Q12767 1356 aa19.59■□□□□ 0.73
CRAT-201ENST00000318080 IBTKQ9P2D0 1353 aaPredicted RBP19.59■□□□□ 0.73
CRAT-201ENST00000318080 RGS12O14924 1447 aa19.58■□□□□ 0.73
CRAT-201ENST00000318080 ADGRL3Q9HAR2 1447 aa19.58■□□□□ 0.73
CRAT-201ENST00000318080 NOL8Q76FK4 1167 aaKnown RBP19.58■□□□□ 0.73
CRAT-201ENST00000318080 PDLIM2Q96JY6 352 aa19.58■□□□□ 0.73
CRAT-201ENST00000318080 MIS18AQ9NYP9 233 aa19.58■□□□□ 0.73
CRAT-201ENST00000318080 MSH6P52701 1360 aa19.58■□□□□ 0.73
CRAT-201ENST00000318080 PLEKHG3A1L390 1219 aa19.58■□□□□ 0.72
CRAT-201ENST00000318080 SOX12O15370 315 aa19.58■□□□□ 0.72
CRAT-201ENST00000318080 NUTM2GQ5VZR2 741 aa19.57■□□□□ 0.72
CRAT-201ENST00000318080 NWD1Q149M9 1564 aa19.57■□□□□ 0.72
CRAT-201ENST00000318080 ESCO1Q5FWF5 840 aa19.56■□□□□ 0.72
CRAT-201ENST00000318080 RTL1A6NKG5 1358 aa19.56■□□□□ 0.72
CRAT-201ENST00000318080 DNTTIP2Q5QJE6 756 aaKnown RBP19.56■□□□□ 0.72
CRAT-201ENST00000318080 FMN2Q9NZ56 1722 aa19.56■□□□□ 0.72
CRAT-201ENST00000318080 PTMAP06454 111 aaKnown RBP19.55■□□□□ 0.72
CRAT-201ENST00000318080 DLG5Q8TDM6 1919 aa19.55■□□□□ 0.72
CRAT-201ENST00000318080 CBX1P83916 185 aa19.55■□□□□ 0.72
CRAT-201ENST00000318080 EDC4Q6P2E9 1401 aaKnown RBP19.55■□□□□ 0.72
CRAT-201ENST00000318080 F6X3S4 739 aa19.55■□□□□ 0.72
CRAT-201ENST00000318080 SULT6B1Q6IMI4 303 aa19.55■□□□□ 0.72
CRAT-201ENST00000318080 ITSN1Q15811 1721 aa19.54■□□□□ 0.72
CRAT-201ENST00000318080 TTC21BQ7Z4L5 1316 aa19.54■□□□□ 0.72
CRAT-201ENST00000318080 ST18O60284 1047 aa19.54■□□□□ 0.72
CRAT-201ENST00000318080 GDPD2Q9HCC8 539 aa19.54■□□□□ 0.72
CRAT-201ENST00000318080 AKAP12Q02952 1782 aa19.54■□□□□ 0.72
CRAT-201ENST00000318080 LMOD3Q0VAK6 560 aa19.54■□□□□ 0.72
CRAT-201ENST00000318080 RPAP2Q8IXW5 612 aaPredicted RBP19.54■□□□□ 0.72
CRAT-201ENST00000318080 DDX17Q92841 729 aaKnown RBP19.54■□□□□ 0.72
CRAT-201ENST00000318080 G2E3Q7L622 706 aa19.53■□□□□ 0.72
CRAT-201ENST00000318080 BBXQ8WY36 941 aaPredicted RBP19.53■□□□□ 0.72
CRAT-201ENST00000318080 COG3Q96JB2 828 aa19.53■□□□□ 0.72
CRAT-201ENST00000318080 USP6P35125 1406 aa19.53■□□□□ 0.72
CRAT-201ENST00000318080 MON2Q7Z3U7 1717 aa19.53■□□□□ 0.72
CRAT-201ENST00000318080 IGSF3O75054 1194 aa19.53■□□□□ 0.72
CRAT-201ENST00000318080 NEK4P51957 841 aa19.52■□□□□ 0.72
CRAT-201ENST00000318080 SLC4A10Q6U841 1118 aa19.52■□□□□ 0.72
CRAT-201ENST00000318080 SLC4A2P04920 1241 aa19.52■□□□□ 0.72
CRAT-201ENST00000318080 CWC22Q9HCG8 908 aaKnown RBP19.52■□□□□ 0.72
CRAT-201ENST00000318080 PHF8Q9UPP1 1060 aa19.52■□□□□ 0.72
CRAT-201ENST00000318080 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.52■□□□□ 0.72
CRAT-201ENST00000318080 PALD1Q9ULE6 856 aa19.51■□□□□ 0.71
CRAT-201ENST00000318080 CHL1O00533 1208 aa19.51■□□□□ 0.71
CRAT-201ENST00000318080 FOXO3O43524 673 aa19.51■□□□□ 0.71
CRAT-201ENST00000318080 TERF1P54274 439 aa19.51■□□□□ 0.71
CRAT-201ENST00000318080 SASS6Q6UVJ0 657 aa19.51■□□□□ 0.71
CRAT-201ENST00000318080 EXOC6BQ9Y2D4 811 aa19.51■□□□□ 0.71
CRAT-201ENST00000318080 CDK12Q9NYV4 1490 aaPredicted RBP19.5■□□□□ 0.71
CRAT-201ENST00000318080 KIF24Q5T7B8 1368 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 DYNC1I1O14576 645 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 ERC2O15083 957 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 EIF4A2Q14240 407 aaKnown RBP19.5■□□□□ 0.71
CRAT-201ENST00000318080 TMX3Q96JJ7 454 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 DTNBO60941 627 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 CASC1Q6TDU7 716 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 LRSAM1Q6UWE0 723 aa19.5■□□□□ 0.71
CRAT-201ENST00000318080 PDE1AP54750 535 aa19.49■□□□□ 0.71
CRAT-201ENST00000318080 MAP7D2Q96T17 732 aa19.49■□□□□ 0.71
CRAT-201ENST00000318080 C19orf44Q9H6X5 657 aa19.49■□□□□ 0.71
CRAT-201ENST00000318080 REC8O95072 547 aa19.49■□□□□ 0.71
CRAT-201ENST00000318080 ZNF710Q8N1W2 664 aa19.49■□□□□ 0.71
CRAT-201ENST00000318080 ANKARQ7Z5J8 1434 aa19.48■□□□□ 0.71
CRAT-201ENST00000318080 SMAP1Q8IYB5 467 aaPredicted RBP19.48■□□□□ 0.71
CRAT-201ENST00000318080 SPDYE4A6NLX3 237 aa19.48■□□□□ 0.71
CRAT-201ENST00000318080 HS1BP3Q53T59 392 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms