RNA–Protein interactions for RNA: ENST00000317243.9

ZNF554-201, Transcript of zinc finger protein 554, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF554, Length 2,736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF554-201ENST00000317243 PPP1R9BQ96SB3 815 aa23.9■■□□□ 1.42
ZNF554-201ENST00000317243 KIF2CQ99661 725 aa23.9■■□□□ 1.42
ZNF554-201ENST00000317243 BMP2KLQ5H9B9 411 aa23.89■■□□□ 1.42
ZNF554-201ENST00000317243 PODXL2Q9NZ53 605 aa23.89■■□□□ 1.42
ZNF554-201ENST00000317243 PHF8Q9UPP1 1060 aa23.89■■□□□ 1.42
ZNF554-201ENST00000317243 PRDM4Q9UKN5 801 aa23.88■■□□□ 1.41
ZNF554-201ENST00000317243 PLEKHM2Q8IWE5 1019 aa23.88■■□□□ 1.41
ZNF554-201ENST00000317243 RTL1A6NKG5 1358 aa23.88■■□□□ 1.41
ZNF554-201ENST00000317243 KIAA0232Q92628 1395 aa23.88■■□□□ 1.41
ZNF554-201ENST00000317243 ANP32BQ92688 251 aaKnown RBP23.87■■□□□ 1.41
ZNF554-201ENST00000317243 LRRC59Q96AG4 307 aaKnown RBP23.87■■□□□ 1.41
ZNF554-201ENST00000317243 R3HCC1Q9Y3T6 440 aaKnown RBP23.87■■□□□ 1.41
ZNF554-201ENST00000317243 ORAI2Q96SN7 254 aa23.87■■□□□ 1.41
ZNF554-201ENST00000317243 DCTPP1Q9H773 170 aa23.87■■□□□ 1.41
ZNF554-201ENST00000317243 CIZ1Q9ULV3 898 aaPredicted RBP23.87■■□□□ 1.41
ZNF554-201ENST00000317243 NWD1Q149M9 1564 aa23.87■■□□□ 1.41
ZNF554-201ENST00000317243 TSHZ3Q63HK5 1081 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.85■■□□□ 1.41
ZNF554-201ENST00000317243 ANKRD44Q8N8A2 993 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 GNAT3A8MTJ3 354 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 NBPF6Q5VWK0 638 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 LMOD2Q6P5Q4 547 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 NBPF4Q96M43 638 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 ARID3AQ99856 593 aa23.85■■□□□ 1.41
ZNF554-201ENST00000317243 K7ELQ4 463 aaPredicted RBP23.84■■□□□ 1.41
ZNF554-201ENST00000317243 SSFA2P28290 1259 aa23.84■■□□□ 1.41
ZNF554-201ENST00000317243 ANKLE2Q86XL3 938 aa23.84■■□□□ 1.41
ZNF554-201ENST00000317243 GAS2L2Q8NHY3 880 aa23.84■■□□□ 1.41
ZNF554-201ENST00000317243 LGR6Q9HBX8 967 aa23.83■■□□□ 1.41
ZNF554-201ENST00000317243 DDX49Q9Y6V7 483 aaKnown RBP23.83■■□□□ 1.4
ZNF554-201ENST00000317243 CHMP4BQ9H444 224 aaKnown RBP23.82■■□□□ 1.4
ZNF554-201ENST00000317243 PSME1Q06323 249 aa23.82■■□□□ 1.4
ZNF554-201ENST00000317243 KCNQ3O43525 872 aa23.81■■□□□ 1.4
ZNF554-201ENST00000317243 FKBP5Q13451 457 aaPredicted RBP23.81■■□□□ 1.4
ZNF554-201ENST00000317243 EXOC6BQ9Y2D4 811 aa23.81■■□□□ 1.4
ZNF554-201ENST00000317243 PTPRCP08575 1304 aa23.8■■□□□ 1.4
ZNF554-201ENST00000317243 ANKARQ7Z5J8 1434 aa23.8■■□□□ 1.4
ZNF554-201ENST00000317243 AK9Q5TCS8 1911 aa23.8■■□□□ 1.4
ZNF554-201ENST00000317243 PHAXQ9H814 394 aaKnown RBP23.8■■□□□ 1.4
ZNF554-201ENST00000317243 FLIIQ13045 1269 aa23.79■■□□□ 1.4
ZNF554-201ENST00000317243 LTN1O94822 1766 aa23.79■■□□□ 1.4
ZNF554-201ENST00000317243 RGPD2P0DJD1 1756 aa23.79■■□□□ 1.4
ZNF554-201ENST00000317243 ANXA1P04083 346 aa23.79■■□□□ 1.4
ZNF554-201ENST00000317243 PTMSP20962 102 aa23.79■■□□□ 1.4
ZNF554-201ENST00000317243 EIF2S2P20042 333 aaKnown RBP23.78■■□□□ 1.4
ZNF554-201ENST00000317243 CHD2O14647 1828 aaKnown RBP23.77■■□□□ 1.4
ZNF554-201ENST00000317243 MAP3K5Q99683 1374 aa23.77■■□□□ 1.4
ZNF554-201ENST00000317243 GOLGA6L22H0YM25 854 aa23.77■■□□□ 1.4
ZNF554-201ENST00000317243 PNMA6EA0A0J9YXQ4 647 aa23.76■■□□□ 1.39
ZNF554-201ENST00000317243 TTC22Q5TAA0 569 aa23.76■■□□□ 1.39
ZNF554-201ENST00000317243 STK31Q9BXU1 1019 aa23.76■■□□□ 1.39
ZNF554-201ENST00000317243 NCLP19338 710 aaKnown RBP23.76■■□□□ 1.39
ZNF554-201ENST00000317243 TERF1P54274 439 aa23.75■■□□□ 1.39
ZNF554-201ENST00000317243 KLHL40Q2TBA0 621 aa23.75■■□□□ 1.39
ZNF554-201ENST00000317243 UQCRHLA0A096LP55 91 aa23.75■■□□□ 1.39
ZNF554-201ENST00000317243 UQCRHP07919 91 aa23.75■■□□□ 1.39
ZNF554-201ENST00000317243 RPAP2Q8IXW5 612 aaPredicted RBP23.75■■□□□ 1.39
ZNF554-201ENST00000317243 DDX17Q92841 729 aaKnown RBP23.75■■□□□ 1.39
ZNF554-201ENST00000317243 KIF24Q5T7B8 1368 aa23.74■■□□□ 1.39
ZNF554-201ENST00000317243 CDC45O75419 566 aa23.74■■□□□ 1.39
ZNF554-201ENST00000317243 SDSP20132 328 aa23.74■■□□□ 1.39
ZNF554-201ENST00000317243 MPRIPQ6WCQ1 1025 aa23.74■■□□□ 1.39
ZNF554-201ENST00000317243 BAG4O95429 457 aaKnown RBP23.74■■□□□ 1.39
ZNF554-201ENST00000317243 TAF7Q15545 349 aaPredicted RBP23.73■■□□□ 1.39
ZNF554-201ENST00000317243 HAP1P54257 671 aaPredicted RBP23.73■■□□□ 1.39
ZNF554-201ENST00000317243 IP6K1Q92551 441 aa23.73■■□□□ 1.39
ZNF554-201ENST00000317243 MAP7D2Q96T17 732 aa23.73■■□□□ 1.39
ZNF554-201ENST00000317243 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.72■■□□□ 1.39
ZNF554-201ENST00000317243 MCTP1Q6DN14 999 aa23.72■■□□□ 1.39
ZNF554-201ENST00000317243 CAVIN1Q6NZI2 390 aaKnown RBP23.72■■□□□ 1.39
ZNF554-201ENST00000317243 CCDC30Q5VVM6 783 aa23.71■■□□□ 1.39
ZNF554-201ENST00000317243 NOL7Q9UMY1 257 aaKnown RBP23.71■■□□□ 1.39
ZNF554-201ENST00000317243 AXIN2Q9Y2T1 843 aa23.71■■□□□ 1.39
ZNF554-201ENST00000317243 LRRC37A3O60309 1634 aa23.7■■□□□ 1.39
ZNF554-201ENST00000317243 HDGFL1Q5TGJ6 251 aa23.7■■□□□ 1.39
ZNF554-201ENST00000317243 LRRFIP2Q9Y608 721 aaKnown RBP23.7■■□□□ 1.39
ZNF554-201ENST00000317243 RBSNQ9H1K0 784 aa23.7■■□□□ 1.38
ZNF554-201ENST00000317243 NFAT5O94916 1531 aa23.69■■□□□ 1.38
ZNF554-201ENST00000317243 PRAMEF22A3QJZ6 481 aa23.69■■□□□ 1.38
ZNF554-201ENST00000317243 FAM208AQ9UK61 1670 aaKnown RBP23.69■■□□□ 1.38
ZNF554-201ENST00000317243 CCT4P50991 539 aaKnown RBP23.68■■□□□ 1.38
ZNF554-201ENST00000317243 IBTKQ9P2D0 1353 aaPredicted RBP23.68■■□□□ 1.38
ZNF554-201ENST00000317243 ZSCAN23Q3MJ62 389 aa23.68■■□□□ 1.38
ZNF554-201ENST00000317243 ZNF500O60304 480 aaPredicted RBP23.68■■□□□ 1.38
ZNF554-201ENST00000317243 GCP02774 474 aa23.68■■□□□ 1.38
ZNF554-201ENST00000317243 GNAI2P04899 355 aa23.68■■□□□ 1.38
ZNF554-201ENST00000317243 PKP1Q13835 747 aa23.68■■□□□ 1.38
ZNF554-201ENST00000317243 PRDM10Q9NQV6 1147 aa23.68■■□□□ 1.38
ZNF554-201ENST00000317243 A0A0U1RQG5 324 aaPredicted RBP23.67■■□□□ 1.38
ZNF554-201ENST00000317243 ZNF445P59923 1031 aa23.67■■□□□ 1.38
ZNF554-201ENST00000317243 CHPF2Q9P2E5 772 aa23.67■■□□□ 1.38
ZNF554-201ENST00000317243 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
ZNF554-201ENST00000317243 HTATSF1O43719 755 aaKnown RBP23.66■■□□□ 1.38
ZNF554-201ENST00000317243 ZNF530Q6P9A1 599 aaPredicted RBP23.66■■□□□ 1.38
ZNF554-201ENST00000317243 USP44Q9H0E7 712 aa23.66■■□□□ 1.38
ZNF554-201ENST00000317243 HS1BP3Q53T59 392 aa23.66■■□□□ 1.38
ZNF554-201ENST00000317243 PXDNQ92626 1479 aa23.65■■□□□ 1.38
ZNF554-201ENST00000317243 PRIM1P49642 420 aaKnown RBP23.65■■□□□ 1.38
ZNF554-201ENST00000317243 ZC3H6P61129 1189 aaKnown RBP23.65■■□□□ 1.38
ZNF554-201ENST00000317243 CLEC17AQ6ZS10 378 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms