RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CTDP1Q9Y5B0 961 aaPredicted RBP16.26■□□□□ 0.19
SPAST-201ENST00000315285 TTC21BQ7Z4L5 1316 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 CDKL5O76039 1030 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 SETQ01105 290 aaPredicted RBP16.26■□□□□ 0.19
SPAST-201ENST00000315285 MPHOSPH8Q99549 860 aa16.26■□□□□ 0.19
SPAST-201ENST00000315285 SH2B1Q9NRF2 756 aaPredicted RBP16.26■□□□□ 0.19
SPAST-201ENST00000315285 PIP4K2AP48426 406 aaPredicted RBP16.25■□□□□ 0.19
SPAST-201ENST00000315285 OFD1O75665 1012 aa16.25■□□□□ 0.19
SPAST-201ENST00000315285 C8orf34Q49A92 452 aa16.25■□□□□ 0.19
SPAST-201ENST00000315285 AMOTQ4VCS5 1084 aa16.25■□□□□ 0.19
SPAST-201ENST00000315285 TTC22Q5TAA0 569 aa16.25■□□□□ 0.19
SPAST-201ENST00000315285 PLCH2O75038 1416 aa16.25■□□□□ 0.19
SPAST-201ENST00000315285 SYCP2Q9BX26 1530 aa16.25■□□□□ 0.19
SPAST-201ENST00000315285 STK11IPQ8N1F8 1099 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 POLR3AO14802 1390 aaPredicted RBP16.24■□□□□ 0.19
SPAST-201ENST00000315285 DENND4BO75064 1496 aaPredicted RBP16.24■□□□□ 0.19
SPAST-201ENST00000315285 LIMCH1Q9UPQ0 1083 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 AMOTL2Q9Y2J4 779 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 CCDC183Q5T5S1 534 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 AK7Q96M32 723 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 CCDC43Q96MW1 224 aaKnown RBP16.24■□□□□ 0.19
SPAST-201ENST00000315285 FBLN1P23142 703 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 FILIP1Q7Z7B0 1213 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 CAGE1Q8TC20 777 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 DACH1Q9UI36 760 aa16.24■□□□□ 0.19
SPAST-201ENST00000315285 NUP133Q8WUM0 1156 aa16.23■□□□□ 0.19
SPAST-201ENST00000315285 DBF4Q9UBU7 674 aaPredicted RBP16.23■□□□□ 0.19
SPAST-201ENST00000315285 SCAND2PQ9GZW5 306 aaPredicted RBP16.23■□□□□ 0.19
SPAST-201ENST00000315285 EPS15P42566 896 aa16.23■□□□□ 0.19
SPAST-201ENST00000315285 CAMK4Q16566 473 aa16.23■□□□□ 0.19
SPAST-201ENST00000315285 CCDC85AQ96PX6 553 aaPredicted RBP16.23■□□□□ 0.19
SPAST-201ENST00000315285 IMMTQ16891 758 aaKnown RBP16.23■□□□□ 0.19
SPAST-201ENST00000315285 MPRIPQ6WCQ1 1025 aa16.23■□□□□ 0.19
SPAST-201ENST00000315285 MAGEC2Q9UBF1 373 aaPredicted RBP16.23■□□□□ 0.19
SPAST-201ENST00000315285 CCDC8Q9H0W5 538 aaPredicted RBP16.22■□□□□ 0.19
SPAST-201ENST00000315285 U3KPZ7 1027 aaPredicted RBP16.22■□□□□ 0.19
SPAST-201ENST00000315285 BAG4O95429 457 aaKnown RBP16.22■□□□□ 0.19
SPAST-201ENST00000315285 MYD88Q99836 296 aa16.22■□□□□ 0.19
SPAST-201ENST00000315285 PHF8Q9UPP1 1060 aa16.22■□□□□ 0.19
SPAST-201ENST00000315285 ARHGEF12Q9NZN5 1544 aa16.21■□□□□ 0.19
SPAST-201ENST00000315285 CBFA2T2O43439 604 aa16.21■□□□□ 0.19
SPAST-201ENST00000315285 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
SPAST-201ENST00000315285 SAMD1Q6SPF0 538 aaPredicted RBP16.21■□□□□ 0.19
SPAST-201ENST00000315285 PPFIBP1Q86W92 1011 aa16.21■□□□□ 0.19
SPAST-201ENST00000315285 PER1O15534 1290 aaPredicted RBP16.21■□□□□ 0.18
SPAST-201ENST00000315285 TDO2P48775 406 aa16.21■□□□□ 0.18
SPAST-201ENST00000315285 ERCC4Q92889 916 aaPredicted RBP16.21■□□□□ 0.18
SPAST-201ENST00000315285 CDK5RAP3Q96JB5 506 aa16.21■□□□□ 0.18
SPAST-201ENST00000315285 WDR62O43379 1518 aa16.2■□□□□ 0.18
SPAST-201ENST00000315285 PIK3C2GO75747 1445 aa16.2■□□□□ 0.18
SPAST-201ENST00000315285 ECHDC1Q9NTX5 307 aa16.2■□□□□ 0.18
SPAST-201ENST00000315285 MEX3CQ5U5Q3 659 aaKnown RBP16.2■□□□□ 0.18
SPAST-201ENST00000315285 TSHZ3Q63HK5 1081 aa16.2■□□□□ 0.18
SPAST-201ENST00000315285 UBAC1Q9BSL1 405 aa16.2■□□□□ 0.18
SPAST-201ENST00000315285 EIF2AK4Q9P2K8 1649 aaKnown RBP16.19■□□□□ 0.18
SPAST-201ENST00000315285 HYPKQ9NX55 129 aa16.19■□□□□ 0.18
SPAST-201ENST00000315285 ACEP12821 1306 aa16.19■□□□□ 0.18
SPAST-201ENST00000315285 NOL7Q9UMY1 257 aaKnown RBP16.19■□□□□ 0.18
SPAST-201ENST00000315285 PTCD1O75127 700 aaKnown RBP16.19■□□□□ 0.18
SPAST-201ENST00000315285 KLHL40Q2TBA0 621 aa16.19■□□□□ 0.18
SPAST-201ENST00000315285 TNNQ9UQP3 1299 aa16.19■□□□□ 0.18
SPAST-201ENST00000315285 RLBP1P12271 317 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 PPP1R42Q7Z4L9 355 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 MEIS3Q99687 375 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 GDPD2Q9HCC8 539 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 RRP9O43818 475 aaKnown RBP16.18■□□□□ 0.18
SPAST-201ENST00000315285 IKQ13123 557 aaPredicted RBP16.18■□□□□ 0.18
SPAST-201ENST00000315285 AKAP2Q9Y2D5 859 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 IFIT1P09914 478 aaKnown RBP16.18■□□□□ 0.18
SPAST-201ENST00000315285 SDSP20132 328 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 AIDAQ96BJ3 306 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 EVI5LQ96CN4 794 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 LARP6Q9BRS8 491 aaKnown RBP16.18■□□□□ 0.18
SPAST-201ENST00000315285 SPINK5Q9NQ38 1064 aaPredicted RBP16.18■□□□□ 0.18
SPAST-201ENST00000315285 PIK3R4Q99570 1358 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 METTL24Q5JXM2 366 aa16.18■□□□□ 0.18
SPAST-201ENST00000315285 KIAA0556O60303 1618 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 SMTNL1A8MU46 457 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 CDR1P51861 262 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 ZNHIT6Q9NWK9 470 aaKnown RBP16.17■□□□□ 0.18
SPAST-201ENST00000315285 PZPP20742 1482 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 FOXO3O43524 673 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 WASF1Q92558 559 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 CARD14Q9BXL6 1004 aa16.17■□□□□ 0.18
SPAST-201ENST00000315285 FAM177A1Q8N128 213 aaPredicted RBP16.17■□□□□ 0.18
SPAST-201ENST00000315285 MRPL50Q8N5N7 158 aaKnown RBP16.17■□□□□ 0.18
SPAST-201ENST00000315285 PI4KAP2A4QPH2 592 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 HMGB1P09429 215 aaKnown RBP16.16■□□□□ 0.18
SPAST-201ENST00000315285 STIM1Q13586 685 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 ANKRD44Q8N8A2 993 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 PI4KAP1Q8N8J0 262 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 LRP2BPQ9P2M1 347 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 SHANK2Q9UPX8 1470 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 STARD3NLO95772 234 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 USP25Q9UHP3 1055 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 STX6O43752 255 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 HSP90AB2PQ58FF8 381 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 C8orf58Q8NAV2 365 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 MAP3K2Q9Y2U5 619 aa16.16■□□□□ 0.18
SPAST-201ENST00000315285 CCAR1Q8IX12 1150 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms