RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 IBTKQ9P2D0 1353 aaPredicted RBP23.21■■□□□ 1.31
HERPUD2-201ENST00000311350 A0A0U1RQG5 324 aaPredicted RBP23.2■■□□□ 1.3
HERPUD2-201ENST00000311350 SOCS7O14512 581 aa23.2■■□□□ 1.3
HERPUD2-201ENST00000311350 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
HERPUD2-201ENST00000311350 CLEC17AQ6ZS10 378 aa23.2■■□□□ 1.3
HERPUD2-201ENST00000311350 MAP7D2Q96T17 732 aa23.2■■□□□ 1.3
HERPUD2-201ENST00000311350 ZBTB7CA1YPR0 619 aa23.19■■□□□ 1.3
HERPUD2-201ENST00000311350 ANKRD45Q5TZF3 282 aa23.19■■□□□ 1.3
HERPUD2-201ENST00000311350 PDLIM2Q96JY6 352 aa23.19■■□□□ 1.3
HERPUD2-201ENST00000311350 PXDNQ92626 1479 aa23.18■■□□□ 1.3
HERPUD2-201ENST00000311350 CHAMP1Q96JM3 812 aa23.18■■□□□ 1.3
HERPUD2-201ENST00000311350 LMBRD1Q9NUN5 540 aa23.18■■□□□ 1.3
HERPUD2-201ENST00000311350 PHACTR3Q96KR7 559 aa23.18■■□□□ 1.3
HERPUD2-201ENST00000311350 ZHX1Q9UKY1 873 aaPredicted RBP23.18■■□□□ 1.3
HERPUD2-201ENST00000311350 ANKARQ7Z5J8 1434 aa23.18■■□□□ 1.3
HERPUD2-201ENST00000311350 PHF8Q9UPP1 1060 aa23.17■■□□□ 1.3
HERPUD2-201ENST00000311350 MAP2P11137 1827 aaKnown RBP23.17■■□□□ 1.3
HERPUD2-201ENST00000311350 HS1BP3Q53T59 392 aa23.17■■□□□ 1.3
HERPUD2-201ENST00000311350 JARID2Q92833 1246 aaPredicted RBP23.17■■□□□ 1.3
HERPUD2-201ENST00000311350 MBIPQ9NS73 344 aa23.16■■□□□ 1.3
HERPUD2-201ENST00000311350 KIF1AQ12756 1690 aa23.16■■□□□ 1.3
HERPUD2-201ENST00000311350 WASLO00401 505 aaPredicted RBP23.16■■□□□ 1.3
HERPUD2-201ENST00000311350 POTEAQ6S8J7 498 aa23.16■■□□□ 1.3
HERPUD2-201ENST00000311350 C1orf115Q9H7X2 142 aa23.16■■□□□ 1.3
HERPUD2-201ENST00000311350 ZKSCAN5Q9Y2L8 839 aa23.16■■□□□ 1.3
HERPUD2-201ENST00000311350 SIRT2Q8IXJ6 389 aa23.15■■□□□ 1.3
HERPUD2-201ENST00000311350 CDC45O75419 566 aa23.14■■□□□ 1.29
HERPUD2-201ENST00000311350 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.14■■□□□ 1.291e-6■■■□□ 15
HERPUD2-201ENST00000311350 TWISTNBQ3B726 338 aaPredicted RBP23.14■■□□□ 1.29
HERPUD2-201ENST00000311350 TSPYL6Q8N831 410 aa23.14■■□□□ 1.29
HERPUD2-201ENST00000311350 PRPF40AO75400 957 aaKnown RBP23.13■■□□□ 1.29
HERPUD2-201ENST00000311350 SMAP1Q8IYB5 467 aaPredicted RBP23.13■■□□□ 1.29
HERPUD2-201ENST00000311350 GPT2Q8TD30 523 aa23.13■■□□□ 1.29
HERPUD2-201ENST00000311350 HAP1P54257 671 aaPredicted RBP23.13■■□□□ 1.29
HERPUD2-201ENST00000311350 MON2Q7Z3U7 1717 aa23.12■■□□□ 1.29
HERPUD2-201ENST00000311350 DYNC1I1O14576 645 aa23.11■■□□□ 1.29
HERPUD2-201ENST00000311350 KRT28Q7Z3Y7 464 aa23.11■■□□□ 1.29
HERPUD2-201ENST00000311350 PRR36Q9H6K5 1346 aa23.11■■□□□ 1.29
HERPUD2-201ENST00000311350 HMOX1P09601 288 aa23.11■■□□□ 1.29
HERPUD2-201ENST00000311350 NRKQ7Z2Y5 1582 aa23.11■■□□□ 1.29
HERPUD2-201ENST00000311350 RGPD8O14715 1765 aaPredicted RBP23.11■■□□□ 1.29
HERPUD2-201ENST00000311350 NSFL1CQ9UNZ2 370 aaKnown RBP23.1■■□□□ 1.29
HERPUD2-201ENST00000311350 ZNF772Q68DY9 489 aaPredicted RBP23.1■■□□□ 1.29
HERPUD2-201ENST00000311350 TSC1Q92574 1164 aa23.09■■□□□ 1.29
HERPUD2-201ENST00000311350 EMILIN1Q9Y6C2 1016 aa23.09■■□□□ 1.29
HERPUD2-201ENST00000311350 INTS3Q68E01 1043 aaKnown RBP23.09■■□□□ 1.29
HERPUD2-201ENST00000311350 THUMPD2Q9BTF0 503 aaKnown RBP23.09■■□□□ 1.29
HERPUD2-201ENST00000311350 DCTPP1Q9H773 170 aa23.09■■□□□ 1.29
HERPUD2-201ENST00000311350 SPATA31A3Q5VYP0 1347 aa23.09■■□□□ 1.29
HERPUD2-201ENST00000311350 ADAMTS2O95450 1211 aa23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 CYP2E1P05181 493 aaPredicted RBP23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 PSME1Q06323 249 aa23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 COL22A1Q8NFW1 1626 aaPredicted RBP23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 SYCE3A1L190 88 aa23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 RNF214Q8ND24 703 aa23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 C8orf37Q96NL8 207 aa23.08■■□□□ 1.29
HERPUD2-201ENST00000311350 DLG5Q8TDM6 1919 aa23.08■■□□□ 1.28
HERPUD2-201ENST00000311350 SASS6Q6UVJ0 657 aa23.07■■□□□ 1.28
HERPUD2-201ENST00000311350 ZGPATQ8N5A5 531 aaKnown RBP23.07■■□□□ 1.28
HERPUD2-201ENST00000311350 TMEM63CQ9P1W3 806 aa23.07■■□□□ 1.28
HERPUD2-201ENST00000311350 AFF2P51816 1311 aa23.07■■□□□ 1.28
HERPUD2-201ENST00000311350 C8orf58Q8NAV2 365 aa23.06■■□□□ 1.28
HERPUD2-201ENST00000311350 COG3Q96JB2 828 aa23.06■■□□□ 1.28
HERPUD2-201ENST00000311350 RABEP1Q15276 862 aa23.06■■□□□ 1.28
HERPUD2-201ENST00000311350 CSPP1Q1MSJ5 1256 aa23.06■■□□□ 1.28
HERPUD2-201ENST00000311350 MPNDQ8N594 471 aa23.06■■□□□ 1.28
HERPUD2-201ENST00000311350 AKAP12Q02952 1782 aa23.06■■□□□ 1.28
HERPUD2-201ENST00000311350 FOXD4L5Q5VV16 416 aaPredicted RBP23.05■■□□□ 1.28
HERPUD2-201ENST00000311350 PLEKHM2Q8IWE5 1019 aa23.05■■□□□ 1.28
HERPUD2-201ENST00000311350 FOXD4L4Q8WXT5 416 aaPredicted RBP23.05■■□□□ 1.28
HERPUD2-201ENST00000311350 NME9Q86XW9 330 aa23.05■■□□□ 1.28
HERPUD2-201ENST00000311350 ZDHHC9Q9Y397 364 aa23.05■■□□□ 1.28
HERPUD2-201ENST00000311350 KIAA0232Q92628 1395 aa23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 NUCB2P80303 420 aa23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 NUDT16Q96DE0 195 aaKnown RBP23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 SBNO1A3KN83 1393 aa23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 GSPT1P15170 499 aaKnown RBP23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 FBLN1P23142 703 aa23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 RPAP2Q8IXW5 612 aaPredicted RBP23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 ANKRD44Q8N8A2 993 aa23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 TNS3Q68CZ2 1445 aa23.04■■□□□ 1.28
HERPUD2-201ENST00000311350 TTC22Q5TAA0 569 aa23.03■■□□□ 1.28
HERPUD2-201ENST00000311350 ATP10DQ9P241 1426 aa23.02■■□□□ 1.28
HERPUD2-201ENST00000311350 LRSAM1Q6UWE0 723 aa23.02■■□□□ 1.28
HERPUD2-201ENST00000311350 NGLY1Q96IV0 654 aa23.02■■□□□ 1.28
HERPUD2-201ENST00000311350 CCDC61Q9Y6R9 512 aa23.02■■□□□ 1.28
HERPUD2-201ENST00000311350 MTERF4Q7Z6M4 381 aaKnown RBP23.02■■□□□ 1.28
HERPUD2-201ENST00000311350 CCDC39Q9UFE4 941 aa23.02■■□□□ 1.28
HERPUD2-201ENST00000311350 RGS12O14924 1447 aa23.01■■□□□ 1.27
HERPUD2-201ENST00000311350 CCDC94Q9BW85 323 aaPredicted RBP23.01■■□□□ 1.27
HERPUD2-201ENST00000311350 NGDNQ8NEJ9 315 aaKnown RBP23.01■■□□□ 1.27
HERPUD2-201ENST00000311350 PTPRCP08575 1304 aa23.01■■□□□ 1.27
HERPUD2-201ENST00000311350 ITSN1Q15811 1721 aa23■■□□□ 1.27
HERPUD2-201ENST00000311350 FAM177BA6PVY3 158 aa23■■□□□ 1.27
HERPUD2-201ENST00000311350 ZSCAN20P17040 1043 aaPredicted RBP23■■□□□ 1.27
HERPUD2-201ENST00000311350 MCM5P33992 734 aa22.99■■□□□ 1.27
HERPUD2-201ENST00000311350 ARHGEF10O15013 1369 aa22.99■■□□□ 1.27
HERPUD2-201ENST00000311350 ELL2O00472 640 aaPredicted RBP22.99■■□□□ 1.27
HERPUD2-201ENST00000311350 DMTNQ08495 405 aa22.99■■□□□ 1.27
HERPUD2-201ENST00000311350 LMOD2Q6P5Q4 547 aa22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms