RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 TMEM87AQ8NBN3 555 aa22.71■■□□□ 1.23
CHRNB1-201ENST00000306071 LMTK2Q8IWU2 1503 aa22.71■■□□□ 1.23
CHRNB1-201ENST00000306071 CD163L1Q9NR16 1453 aa22.71■■□□□ 1.23
CHRNB1-201ENST00000306071 UBE2HP62256 183 aa22.71■■□□□ 1.23
CHRNB1-201ENST00000306071 BBXQ8WY36 941 aaPredicted RBP22.71■■□□□ 1.23
CHRNB1-201ENST00000306071 RGS12O14924 1447 aa22.71■■□□□ 1.23
CHRNB1-201ENST00000306071 DCTN1Q14203 1278 aa22.7■■□□□ 1.22
CHRNB1-201ENST00000306071 FEZ1Q99689 392 aa22.7■■□□□ 1.22
CHRNB1-201ENST00000306071 GOLGA6L6A8MZA4 724 aa22.7■■□□□ 1.22
CHRNB1-201ENST00000306071 CTIFO43310 598 aaKnown RBP22.7■■□□□ 1.22
CHRNB1-201ENST00000306071 GIMAP6Q6P9H5 292 aa22.69■■□□□ 1.22
CHRNB1-201ENST00000306071 RILPL2Q969X0 211 aa22.69■■□□□ 1.22
CHRNB1-201ENST00000306071 TRIM6-TRIM34B2RNG4 842 aa22.69■■□□□ 1.22
CHRNB1-201ENST00000306071 GGT6Q6P531 493 aa22.69■■□□□ 1.22
CHRNB1-201ENST00000306071 RIMS2Q9UQ26 1411 aa22.68■■□□□ 1.22
CHRNB1-201ENST00000306071 AP5Z1O43299 807 aa22.68■■□□□ 1.22
CHRNB1-201ENST00000306071 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.68■■□□□ 1.22
CHRNB1-201ENST00000306071 CABP1Q9NZU7 370 aa22.68■■□□□ 1.22
CHRNB1-201ENST00000306071 TAF3Q5VWG9 929 aa22.67■■□□□ 1.22
CHRNB1-201ENST00000306071 OGFRQ9NZT2 677 aa22.67■■□□□ 1.22
CHRNB1-201ENST00000306071 FIBPO43427 364 aa22.67■■□□□ 1.22
CHRNB1-201ENST00000306071 RPAP1Q9BWH6 1393 aaPredicted RBP22.67■■□□□ 1.22
CHRNB1-201ENST00000306071 CHD1O14646 1710 aa22.67■■□□□ 1.22
CHRNB1-201ENST00000306071 ZSCAN22P10073 491 aaPredicted RBP22.66■■□□□ 1.22
CHRNB1-201ENST00000306071 PRAM1Q96QH2 718 aa22.66■■□□□ 1.22
CHRNB1-201ENST00000306071 CHMLP26374 656 aa22.66■■□□□ 1.22
CHRNB1-201ENST00000306071 EMILIN1Q9Y6C2 1016 aa22.66■■□□□ 1.22
CHRNB1-201ENST00000306071 KIF20BQ96Q89 1820 aa22.65■■□□□ 1.22
CHRNB1-201ENST00000306071 ABCC3O15438 1527 aa22.65■■□□□ 1.22
CHRNB1-201ENST00000306071 CGNQ9P2M7 1197 aaKnown RBP22.65■■□□□ 1.22
CHRNB1-201ENST00000306071 EXOC6BQ9Y2D4 811 aa22.65■■□□□ 1.22
CHRNB1-201ENST00000306071 HAP1P54257 671 aaPredicted RBP22.64■■□□□ 1.22
CHRNB1-201ENST00000306071 NCBP1Q09161 790 aaKnown RBP22.64■■□□□ 1.22
CHRNB1-201ENST00000306071 FUCA2Q9BTY2 467 aa22.64■■□□□ 1.21
CHRNB1-201ENST00000306071 IL13P35225 146 aa22.63■■□□□ 1.21
CHRNB1-201ENST00000306071 DLG5Q8TDM6 1919 aa22.63■■□□□ 1.21
CHRNB1-201ENST00000306071 STX6O43752 255 aa22.62■■□□□ 1.21
CHRNB1-201ENST00000306071 ASXL2Q76L83 1435 aa22.62■■□□□ 1.21
CHRNB1-201ENST00000306071 SLC4A10Q6U841 1118 aa22.62■■□□□ 1.21
CHRNB1-201ENST00000306071 CDK19Q9BWU1 502 aa22.62■■□□□ 1.21
CHRNB1-201ENST00000306071 ATP6V1DQ9Y5K8 247 aa22.62■■□□□ 1.21
CHRNB1-201ENST00000306071 PTPRCP08575 1304 aa22.62■■□□□ 1.21
CHRNB1-201ENST00000306071 ABCA9Q8IUA7 1624 aa22.61■■□□□ 1.21
CHRNB1-201ENST00000306071 PTGS1P23219 599 aa22.61■■□□□ 1.21
CHRNB1-201ENST00000306071 GTF2E1P29083 439 aaPredicted RBP22.61■■□□□ 1.21
CHRNB1-201ENST00000306071 MAP2P11137 1827 aaKnown RBP22.61■■□□□ 1.21
CHRNB1-201ENST00000306071 SSH2Q76I76 1423 aa22.61■■□□□ 1.21
CHRNB1-201ENST00000306071 YTHDC2Q9H6S0 1430 aaKnown RBP22.61■■□□□ 1.21
CHRNB1-201ENST00000306071 SYT1P21579 422 aa22.6■■□□□ 1.21
CHRNB1-201ENST00000306071 LRRCC1Q9C099 1032 aa22.6■■□□□ 1.21
CHRNB1-201ENST00000306071 C16orf45Q96MC5 204 aaPredicted RBP22.6■■□□□ 1.21
CHRNB1-201ENST00000306071 F13A1P00488 732 aa22.59■■□□□ 1.21
CHRNB1-201ENST00000306071 CCDC192P0DO97 292 aa22.59■■□□□ 1.21
CHRNB1-201ENST00000306071 CTNNA3Q9UI47 895 aa22.59■■□□□ 1.21
CHRNB1-201ENST00000306071 UHRF1BP1LA0JNW5 1464 aa22.59■■□□□ 1.21
CHRNB1-201ENST00000306071 CPSF1Q10570 1443 aaKnown RBP22.59■■□□□ 1.21
CHRNB1-201ENST00000306071 NEXMIFQ5QGS0 1516 aa22.59■■□□□ 1.21
CHRNB1-201ENST00000306071 KIDINS220Q9ULH0 1771 aa22.58■■□□□ 1.21
CHRNB1-201ENST00000306071 LARP6Q9BRS8 491 aaKnown RBP22.58■■□□□ 1.21
CHRNB1-201ENST00000306071 SLC4A2P04920 1241 aa22.58■■□□□ 1.21
CHRNB1-201ENST00000306071 GABPB1Q06547 395 aaPredicted RBP22.58■■□□□ 1.21
CHRNB1-201ENST00000306071 SMC3Q9UQE7 1217 aa22.58■■□□□ 1.21
CHRNB1-201ENST00000306071 SMTNL1A8MU46 457 aa22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 FRMPD1Q5SYB0 1578 aa22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 SALL3Q9BXA9 1300 aa22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 SYCP1Q15431 976 aa22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 DRC7Q8IY82 874 aa22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 IL17RAQ96F46 866 aa22.57■■□□□ 1.2
CHRNB1-201ENST00000306071 PTPRMP28827 1452 aa22.56■■□□□ 1.2
CHRNB1-201ENST00000306071 HSPA4P34932 840 aa22.56■■□□□ 1.2
CHRNB1-201ENST00000306071 DNM1Q05193 864 aaKnown RBP22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 UNC5CLQ8IV45 518 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 KIAA0232Q92628 1395 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 F6X3S4 739 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 GNAI2P04899 355 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 CCDC186Q7Z3E2 898 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 KLHL34Q8N239 644 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 TMEM51Q9NW97 253 aa22.55■■□□□ 1.2
CHRNB1-201ENST00000306071 TNNT1P13805 278 aa22.54■■□□□ 1.2
CHRNB1-201ENST00000306071 DDX41Q9UJV9 622 aaKnown RBP22.54■■□□□ 1.2
CHRNB1-201ENST00000306071 LRMPQ12912 555 aa22.54■■□□□ 1.2
CHRNB1-201ENST00000306071 NAA30Q147X3 362 aaPredicted RBP22.54■■□□□ 1.2
CHRNB1-201ENST00000306071 FAM200AQ8TCP9 573 aa22.54■■□□□ 1.2
CHRNB1-201ENST00000306071 IL25Q9H293 177 aa22.54■■□□□ 1.2
CHRNB1-201ENST00000306071 AK2P54819 239 aa22.53■■□□□ 1.2
CHRNB1-201ENST00000306071 CCDC112Q8NEF3 446 aa22.53■■□□□ 1.2
CHRNB1-201ENST00000306071 CLTCQ00610 1675 aaKnown RBP22.53■■□□□ 1.2
CHRNB1-201ENST00000306071 LIMCH1Q9UPQ0 1083 aa22.53■■□□□ 1.2
CHRNB1-201ENST00000306071 CHMP3Q9Y3E7 222 aa22.52■■□□□ 1.2
CHRNB1-201ENST00000306071 CCT4P50991 539 aaKnown RBP22.52■■□□□ 1.2
CHRNB1-201ENST00000306071 LUZP1Q86V48 1076 aa22.52■■□□□ 1.2
CHRNB1-201ENST00000306071 CHL1O00533 1208 aa22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 SLFN14P0C7P3 912 aa22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 MCM10Q7L590 875 aa22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 PAXBP1Q9Y5B6 917 aa22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 RUFY3Q7L099 469 aa22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 BCL11BQ9C0K0 894 aaPredicted RBP22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 TUBGCP6Q96RT7 1819 aa22.51■■□□□ 1.19
CHRNB1-201ENST00000306071 RRS1Q15050 365 aaKnown RBP22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms