RNA–Protein interactions for RNA: ENST00000304338.7

PPP4R4-201, Transcript of protein phosphatase 4 regulatory subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PPP4R4, Length 3,868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R4-201ENST00000304338 CEP85Q6P2H3 762 aa18.66■□□□□ 0.58
PPP4R4-201ENST00000304338 OTUD7AQ8TE49 926 aaPredicted RBP18.66■□□□□ 0.58
PPP4R4-201ENST00000304338 IL1RAPL2Q9NP60 686 aa18.66■□□□□ 0.58
PPP4R4-201ENST00000304338 SETD1AO15047 1707 aaKnown RBP18.66■□□□□ 0.58
PPP4R4-201ENST00000304338 ANKRD44Q8N8A2 993 aa18.65■□□□□ 0.58
PPP4R4-201ENST00000304338 DDX54Q8TDD1 881 aaKnown RBP18.65■□□□□ 0.58
PPP4R4-201ENST00000304338 CHMP4AQ9BY43 222 aa18.65■□□□□ 0.58
PPP4R4-201ENST00000304338 USP19O94966 1318 aa18.65■□□□□ 0.58
PPP4R4-201ENST00000304338 NFKBIBQ15653 356 aa18.64■□□□□ 0.57
PPP4R4-201ENST00000304338 NPHP3Q7Z494 1330 aa18.64■□□□□ 0.57
PPP4R4-201ENST00000304338 KIAA0232Q92628 1395 aa18.64■□□□□ 0.57
PPP4R4-201ENST00000304338 PIP4K2AP48426 406 aaPredicted RBP18.64■□□□□ 0.57
PPP4R4-201ENST00000304338 TBC1D32Q96NH3 1257 aa18.63■□□□□ 0.57
PPP4R4-201ENST00000304338 SSH2Q76I76 1423 aa18.63■□□□□ 0.57
PPP4R4-201ENST00000304338 CDC45O75419 566 aa18.63■□□□□ 0.57
PPP4R4-201ENST00000304338 SPG7Q9UQ90 795 aa18.63■□□□□ 0.57
PPP4R4-201ENST00000304338 RIC3Q7Z5B4 369 aa18.62■□□□□ 0.57
PPP4R4-201ENST00000304338 DCTPP1Q9H773 170 aa18.62■□□□□ 0.57
PPP4R4-201ENST00000304338 RNMTO43148 476 aaKnown RBP18.62■□□□□ 0.57
PPP4R4-201ENST00000304338 ANKRD26Q9UPS8 1709 aa18.61■□□□□ 0.57
PPP4R4-201ENST00000304338 SRGAP3O43295 1099 aa18.61■□□□□ 0.57
PPP4R4-201ENST00000304338 NFATC2IPQ8NCF5 419 aa18.61■□□□□ 0.57
PPP4R4-201ENST00000304338 FRAT2O75474 233 aaPredicted RBP18.61■□□□□ 0.57
PPP4R4-201ENST00000304338 TBC1D9Q6ZT07 1266 aa18.61■□□□□ 0.57
PPP4R4-201ENST00000304338 BMP2KLQ5H9B9 411 aa18.6■□□□□ 0.57
PPP4R4-201ENST00000304338 DNAAF4Q8WXU2 420 aa18.6■□□□□ 0.57
PPP4R4-201ENST00000304338 CABP4P57796 275 aa18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 TBC1D2Q9BYX2 928 aa18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 LRRCC1Q9C099 1032 aa18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 CRB1P82279 1406 aa18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 EIF4A1P60842 406 aaKnown RBP18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 KDRP35968 1356 aa18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 CHMP3Q9Y3E7 222 aa18.59■□□□□ 0.57
PPP4R4-201ENST00000304338 PRAMEF22A3QJZ6 481 aa18.58■□□□□ 0.57
PPP4R4-201ENST00000304338 MAP4K4O95819 1239 aaPredicted RBP18.58■□□□□ 0.57
PPP4R4-201ENST00000304338 DBF4Q9UBU7 674 aaPredicted RBP18.58■□□□□ 0.56
PPP4R4-201ENST00000304338 DDX58O95786 925 aaKnown RBP18.58■□□□□ 0.56
PPP4R4-201ENST00000304338 NOL8Q76FK4 1167 aaKnown RBP18.58■□□□□ 0.56
PPP4R4-201ENST00000304338 PLEKHM2Q8IWE5 1019 aa18.57■□□□□ 0.56
PPP4R4-201ENST00000304338 MAP3K2Q9Y2U5 619 aa18.57■□□□□ 0.56
PPP4R4-201ENST00000304338 CCDC9Q9Y3X0 531 aaKnown RBP18.57■□□□□ 0.56
PPP4R4-201ENST00000304338 PTCD1O75127 700 aaKnown RBP18.57■□□□□ 0.56
PPP4R4-201ENST00000304338 KNDC1Q76NI1 1749 aa18.57■□□□□ 0.56
PPP4R4-201ENST00000304338 NUTM1Q86Y26 1132 aa18.57■□□□□ 0.56
PPP4R4-201ENST00000304338 PNMA6EA0A0J9YXQ4 647 aa18.56■□□□□ 0.56
PPP4R4-201ENST00000304338 NEXNQ0ZGT2 675 aa18.56■□□□□ 0.56
PPP4R4-201ENST00000304338 JARID2Q92833 1246 aaPredicted RBP18.56■□□□□ 0.56
PPP4R4-201ENST00000304338 RTL1A6NKG5 1358 aa18.56■□□□□ 0.56
PPP4R4-201ENST00000304338 PPP1R42Q7Z4L9 355 aa18.55■□□□□ 0.56
PPP4R4-201ENST00000304338 SYTL4Q96C24 671 aaPredicted RBP18.55■□□□□ 0.56
PPP4R4-201ENST00000304338 MON2Q7Z3U7 1717 aa18.55■□□□□ 0.56
PPP4R4-201ENST00000304338 RGPD8O14715 1765 aaPredicted RBP18.55■□□□□ 0.56
PPP4R4-201ENST00000304338 IFNL2Q8IZJ0 200 aa18.55■□□□□ 0.56
PPP4R4-201ENST00000304338 CWF19L2Q2TBE0 894 aaKnown RBP18.54■□□□□ 0.56
PPP4R4-201ENST00000304338 KIF24Q5T7B8 1368 aa18.54■□□□□ 0.56
PPP4R4-201ENST00000304338 SIL1Q9H173 461 aa18.54■□□□□ 0.56
PPP4R4-201ENST00000304338 ERBB3P21860 1342 aa18.54■□□□□ 0.56
PPP4R4-201ENST00000304338 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
PPP4R4-201ENST00000304338 GZF1Q9H116 711 aaPredicted RBP18.53■□□□□ 0.56
PPP4R4-201ENST00000304338 ANO2Q9NQ90 1003 aa18.53■□□□□ 0.56
PPP4R4-201ENST00000304338 NBPF7P0C2Y1 421 aaPredicted RBP18.53■□□□□ 0.56
PPP4R4-201ENST00000304338 TTC22Q5TAA0 569 aa18.53■□□□□ 0.56
PPP4R4-201ENST00000304338 SLAIN2Q9P270 581 aa18.53■□□□□ 0.56
PPP4R4-201ENST00000304338 SDSP20132 328 aa18.53■□□□□ 0.56
PPP4R4-201ENST00000304338 PROSER3Q2NL68 480 aa18.52■□□□□ 0.56
PPP4R4-201ENST00000304338 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
PPP4R4-201ENST00000304338 C1orf167Q5SNV9 1468 aa18.52■□□□□ 0.56
PPP4R4-201ENST00000304338 USP44Q9H0E7 712 aa18.52■□□□□ 0.56
PPP4R4-201ENST00000304338 ATP8B2P98198 1209 aa18.51■□□□□ 0.55
PPP4R4-201ENST00000304338 GSPT1P15170 499 aaKnown RBP18.5■□□□□ 0.55
PPP4R4-201ENST00000304338 MX1P20591 662 aa18.5■□□□□ 0.55
PPP4R4-201ENST00000304338 REC8O95072 547 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 ZNF790Q6PG37 636 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 GIGYF1O75420 1035 aaPredicted RBP18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 PDE1AP54750 535 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 COPS6Q7L5N1 327 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 MYD88Q99836 296 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 BABAM1Q9NWV8 329 aa18.49■□□□□ 0.55
PPP4R4-201ENST00000304338 IFIT2P09913 472 aaKnown RBP18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 ZNF496Q96IT1 587 aaPredicted RBP18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 ATP5J2-PTCD1G3V325 749 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 BRINP3Q76B58 766 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 XAGE3Q8WTP9 111 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 PEAK1Q9H792 1746 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 EIF5BO60841 1220 aaKnown RBP18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 KCNJ4P48050 445 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 G3BP1Q13283 466 aaKnown RBP eCLIP18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 HYPKQ9NX55 129 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 HDAC5Q9UQL6 1122 aa18.48■□□□□ 0.55
PPP4R4-201ENST00000304338 PA2G4Q9UQ80 394 aaKnown RBP18.47■□□□□ 0.55
PPP4R4-201ENST00000304338 KAT6BQ8WYB5 2073 aa18.47■□□□□ 0.55
PPP4R4-201ENST00000304338 MCCP23508 829 aa18.47■□□□□ 0.55
PPP4R4-201ENST00000304338 CLASRPQ8N2M8 674 aaKnown RBP18.47■□□□□ 0.55
PPP4R4-201ENST00000304338 TPRNQ4KMQ1 711 aa18.46■□□□□ 0.55
PPP4R4-201ENST00000304338 KIAA1211Q6ZU35 1233 aa18.46■□□□□ 0.55
PPP4R4-201ENST00000304338 PHKG2P15735 406 aa18.46■□□□□ 0.54
PPP4R4-201ENST00000304338 FOXD4L5Q5VV16 416 aaPredicted RBP18.46■□□□□ 0.54
PPP4R4-201ENST00000304338 KSR2Q6VAB6 950 aa18.46■□□□□ 0.54
PPP4R4-201ENST00000304338 FOXD4L4Q8WXT5 416 aaPredicted RBP18.46■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms