RNA–Protein interactions for RNA: ENST00000303538.12

PDS5A-201, Transcript of PDS5 cohesin associated factor A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDS5A, Length 7,176 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5A-201ENST00000303538 JAKMIP3Q5VZ66 844 aa19.58■□□□□ 0.72
PDS5A-201ENST00000303538 TAF4BQ92750 862 aa19.58■□□□□ 0.72
PDS5A-201ENST00000303538 CWC15Q9P013 229 aaKnown RBP19.58■□□□□ 0.72
PDS5A-201ENST00000303538 WAPLQ7Z5K2 1190 aa19.58■□□□□ 0.72
PDS5A-201ENST00000303538 WASF1Q92558 559 aa19.58■□□□□ 0.72
PDS5A-201ENST00000303538 CTNNBL1Q8WYA6 563 aaPredicted RBP19.58■□□□□ 0.72
PDS5A-201ENST00000303538 NUDT16Q96DE0 195 aaKnown RBP19.57■□□□□ 0.72
PDS5A-201ENST00000303538 BIN2Q9UBW5 565 aaPredicted RBP19.57■□□□□ 0.72
PDS5A-201ENST00000303538 AKAP2Q9Y2D5 859 aa19.57■□□□□ 0.72
PDS5A-201ENST00000303538 GUCY1B3Q02153 619 aa19.57■□□□□ 0.72
PDS5A-201ENST00000303538 IFIT5Q13325 482 aaKnown RBP19.57■□□□□ 0.72
PDS5A-201ENST00000303538 RFC4P35249 363 aa19.57■□□□□ 0.72
PDS5A-201ENST00000303538 THUMPD2Q9BTF0 503 aaKnown RBP19.57■□□□□ 0.72
PDS5A-201ENST00000303538 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
PDS5A-201ENST00000303538 CCDC113Q9H0I3 377 aa19.56■□□□□ 0.72
PDS5A-201ENST00000303538 MRE11P49959 708 aa19.56■□□□□ 0.72
PDS5A-201ENST00000303538 FILIP1Q7Z7B0 1213 aa19.56■□□□□ 0.72
PDS5A-201ENST00000303538 WDR33Q9C0J8 1336 aaKnown RBP19.56■□□□□ 0.72
PDS5A-201ENST00000303538 EXOC5O00471 708 aa19.56■□□□□ 0.72
PDS5A-201ENST00000303538 SAMM50Q9Y512 469 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 CBFA2T2O43439 604 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 KCNH5Q8NCM2 988 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 CCDC150Q8NCX0 1101 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 ATAD2BQ9ULI0 1458 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 CETN2P41208 172 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 CFAP45Q9UL16 551 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 EPB41L2O43491 1005 aaKnown RBP19.55■□□□□ 0.72
PDS5A-201ENST00000303538 HMGB2P26583 209 aaKnown RBP19.55■□□□□ 0.72
PDS5A-201ENST00000303538 CAMK4Q16566 473 aa19.55■□□□□ 0.72
PDS5A-201ENST00000303538 ATF7IPQ6VMQ6 1270 aa19.54■□□□□ 0.72
PDS5A-201ENST00000303538 CEP131Q9UPN4 1083 aa19.54■□□□□ 0.72
PDS5A-201ENST00000303538 SPTY2D1Q68D10 685 aaPredicted RBP19.54■□□□□ 0.72
PDS5A-201ENST00000303538 ZNF397Q8NF99 534 aaPredicted RBP19.54■□□□□ 0.72
PDS5A-201ENST00000303538 UPF3BQ9BZI7 483 aaKnown RBP19.54■□□□□ 0.72
PDS5A-201ENST00000303538 F8W031 263 aaPredicted RBP19.54■□□□□ 0.72
PDS5A-201ENST00000303538 CHD1LQ86WJ1 897 aa19.54■□□□□ 0.72
PDS5A-201ENST00000303538 SLC5A1P13866 664 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 FERMT3Q86UX7 667 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 CTCFLQ8NI51 663 aaPredicted RBP19.53■□□□□ 0.72
PDS5A-201ENST00000303538 FGD6Q6ZV73 1430 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 MAP3K12Q12852 859 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 KIAA0754O94854 1291 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 ZNF408Q9H9D4 720 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 SLC52A1Q9NWF4 448 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 SMARCA5O60264 1052 aaPredicted RBP19.53■□□□□ 0.72
PDS5A-201ENST00000303538 ZBTB3Q9H5J0 574 aa19.53■□□□□ 0.72
PDS5A-201ENST00000303538 CFAP100Q494V2 611 aa19.52■□□□□ 0.72
PDS5A-201ENST00000303538 CACNA2D4Q7Z3S7 1137 aa19.52■□□□□ 0.72
PDS5A-201ENST00000303538 CCDC8Q9H0W5 538 aaPredicted RBP19.52■□□□□ 0.72
PDS5A-201ENST00000303538 RBM10P98175 930 aaKnown RBP19.52■□□□□ 0.72
PDS5A-201ENST00000303538 KRT32Q14532 448 aa19.52■□□□□ 0.71
PDS5A-201ENST00000303538 FERMT2Q96AC1 680 aa19.52■□□□□ 0.71
PDS5A-201ENST00000303538 U3KPZ7 1027 aaPredicted RBP19.51■□□□□ 0.71
PDS5A-201ENST00000303538 BRD4O60885 1362 aaPredicted RBP19.51■□□□□ 0.71
PDS5A-201ENST00000303538 CCDC144CPQ8IYA2 1237 aa19.51■□□□□ 0.71
PDS5A-201ENST00000303538 TSG101Q99816 390 aa19.51■□□□□ 0.71
PDS5A-201ENST00000303538 USP8P40818 1118 aa19.51■□□□□ 0.71
PDS5A-201ENST00000303538 IQCA1Q86XH1 822 aa19.51■□□□□ 0.71
PDS5A-201ENST00000303538 PUF60Q9UHX1 559 aaKnown RBP19.51■□□□□ 0.71
PDS5A-201ENST00000303538 MAP3K9P80192 1104 aa19.51■□□□□ 0.71
PDS5A-201ENST00000303538 CHRNA2Q15822 529 aa19.51■□□□□ 0.71
PDS5A-201ENST00000303538 LARP1Q6PKG0 1096 aaKnown RBP19.51■□□□□ 0.71
PDS5A-201ENST00000303538 GOPCQ9HD26 462 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 ERBINQ96RT1 1412 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 K7ELQ4 463 aaPredicted RBP19.5■□□□□ 0.71
PDS5A-201ENST00000303538 SYNJ2O15056 1496 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 GSTTP1A0A1W2PQM5 241 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 NLRP5P59047 1200 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 CCDC83Q8IWF9 413 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 NUP62CLQ9H1M0 184 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 GOLGA6L7A0A1B0GV03 622 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 PPP6R1Q9UPN7 881 aa19.5■□□□□ 0.71
PDS5A-201ENST00000303538 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP19.49■□□□□ 0.71
PDS5A-201ENST00000303538 ANKRD18BA2A2Z9 1011 aa19.49■□□□□ 0.71
PDS5A-201ENST00000303538 NESP48681 1621 aa19.49■□□□□ 0.71
PDS5A-201ENST00000303538 CTNNA2P26232 953 aa19.49■□□□□ 0.71
PDS5A-201ENST00000303538 SLF2Q8IX21 1173 aa19.49■□□□□ 0.71
PDS5A-201ENST00000303538 CUX1P39880 1505 aa19.49■□□□□ 0.71
PDS5A-201ENST00000303538 PRPF40BQ6NWY9 871 aaKnown RBP19.49■□□□□ 0.71
PDS5A-201ENST00000303538 ARHGAP29Q52LW3 1261 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 SMARCA4P51532 1647 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 CCDC178Q5BJE1 867 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 DDX46Q7L014 1031 aaKnown RBP19.48■□□□□ 0.71
PDS5A-201ENST00000303538 DYDC1Q8WWB3 177 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 SLC12A7Q9Y666 1083 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 EHMT1Q9H9B1 1298 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 MYO1BO43795 1136 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 TMEM266Q2M3C6 531 aa19.48■□□□□ 0.71
PDS5A-201ENST00000303538 ZNF213O14771 459 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 CABP5Q9NP86 173 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 GOLGA6L10A0A0M3HER8 536 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 MVPQ14764 893 aaKnown RBP19.47■□□□□ 0.71
PDS5A-201ENST00000303538 CCDC61Q9Y6R9 512 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 SPA17Q15506 151 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 TAF7Q15545 349 aaPredicted RBP19.47■□□□□ 0.71
PDS5A-201ENST00000303538 ZNF354CQ86Y25 554 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 CCDC102AQ96A19 550 aa19.47■□□□□ 0.71
PDS5A-201ENST00000303538 IFIT3O14879 490 aaKnown RBP19.47■□□□□ 0.71
PDS5A-201ENST00000303538 MMRN2Q9H8L6 949 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms