RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 RIMS1Q86UR5 1692 aaKnown RBP10.11□□□□□ -0.79
SNRPD1-201ENST00000300413 RNMTO43148 476 aaKnown RBP10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 ALDH1L1O75891 902 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 AK7Q96M32 723 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 GBP4Q96PP9 640 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.1□□□□□ -0.791e-10■□□□□ 9
SNRPD1-201ENST00000300413 CEP126Q9P2H0 1117 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 TRDNQ13061 729 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 AEBP1Q8IUX7 1158 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 LNPKQ9C0E8 428 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 CCDC34Q96HJ3 373 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 PPP1R42Q7Z4L9 355 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 TRIM34Q9BYJ4 488 aa10.1□□□□□ -0.79
SNRPD1-201ENST00000300413 TECPR2O15040 1411 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 PDE4AP27815 886 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 MED14O60244 1454 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 TMEM57Q8N5G2 664 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 CDK12Q9NYV4 1490 aaPredicted RBP10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 SRGAP3O43295 1099 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 MIS18AQ9NYP9 233 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 FER1L4A9Z1Z3 1794 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 ZNF335Q9H4Z2 1342 aaPredicted RBP10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 KIF1BPQ96EK5 621 aa10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 ISY1Q9ULR0 285 aaKnown RBP10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 BLMP54132 1417 aaPredicted RBP10.09□□□□□ -0.79
SNRPD1-201ENST00000300413 PRR36Q9H6K5 1346 aa10.08□□□□□ -0.8
SNRPD1-201ENST00000300413 ARHGEF25Q86VW2 580 aa10.08□□□□□ -0.8
SNRPD1-201ENST00000300413 CWC25Q9NXE8 425 aaPredicted RBP10.08□□□□□ -0.8
SNRPD1-201ENST00000300413 ERVV-2B6SEH9 535 aa10.08□□□□□ -0.8
SNRPD1-201ENST00000300413 TOMM22Q9NS69 142 aa10.08□□□□□ -0.8
SNRPD1-201ENST00000300413 RTN4Q9NQC3 1192 aaKnown RBP10.08□□□□□ -0.8
SNRPD1-201ENST00000300413 TTC39AQ5SRH9 613 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 MYD88Q99836 296 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 FBLN1P23142 703 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 USP31Q70CQ4 1352 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 CARD10Q9BWT7 1032 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 ANKRD13DQ6ZTN6 518 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 FSD1Q9BTV5 496 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 PDZRN3Q9UPQ7 1066 aa10.07□□□□□ -0.8
SNRPD1-201ENST00000300413 ADAMTS13Q76LX8 1427 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 SPATA31A3Q5VYP0 1347 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 QRICH2Q9H0J4 1663 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 FAM83GA6ND36 823 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 PSMA5P28066 241 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 ATP6V1DQ9Y5K8 247 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 DCCP43146 1447 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 KIAA0232Q92628 1395 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 SLC3A2P08195 630 aaKnown RBP10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 KSR2Q6VAB6 950 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 IFIT5Q13325 482 aaKnown RBP10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 CHD1LQ86WJ1 897 aa10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 CDC5LQ99459 802 aaKnown RBP10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 RBM19Q9Y4C8 960 aaKnown RBP10.06□□□□□ -0.8
SNRPD1-201ENST00000300413 BRINP3Q76B58 766 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 IL27Q8NEV9 243 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 ANO2Q9NQ90 1003 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 TRMT112Q9UI30 125 aaKnown RBP10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 USP21Q9UK80 565 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 THRAP3Q9Y2W1 955 aaKnown RBP10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 ERICH2A1L162 156 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 FAM177BA6PVY3 158 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 APPP05067 770 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 TRIM27P14373 513 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 AKAP17AQ02040 695 aaKnown RBP10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 NYXQ9GZU5 481 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 IGSF1Q8N6C5 1336 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 TNS3Q68CZ2 1445 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 ANKRD18BA2A2Z9 1011 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 IFIT1P09914 478 aaKnown RBP10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 ERBB4Q15303 1308 aa10.05□□□□□ -0.8
SNRPD1-201ENST00000300413 RFC4P35249 363 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 ATP6V1AP38606 617 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 MAP3K2Q9Y2U5 619 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 SLIT1O75093 1534 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 WASHC4Q2M389 1173 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 SLC52A2Q9HAB3 445 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 TRPC5Q9UL62 973 aaPredicted RBP10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 WDR17Q8IZU2 1322 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 MYO3AQ8NEV4 1616 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 CHL1O00533 1208 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 MCM2P49736 904 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 RALYLQ86SE5 291 aaKnown RBP10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 PHACTR3Q96KR7 559 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 DDX21Q9NR30 783 aaKnown RBP eCLIP10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 NBPF6Q5VWK0 638 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 MRPL50Q8N5N7 158 aaKnown RBP10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 LINS1Q8NG48 757 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 NBPF4Q96M43 638 aa10.04□□□□□ -0.8
SNRPD1-201ENST00000300413 TMEM131LA2VDJ0 1609 aa10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 GLRX3O76003 335 aaKnown RBP10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 ZNF772Q68DY9 489 aaPredicted RBP10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 NFATC2IPQ8NCF5 419 aa10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 SYAP1Q96A49 352 aaPredicted RBP10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 IPO9Q96P70 1041 aaKnown RBP10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 NACAP1Q9BZK3 213 aa10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 ZNF790Q6PG37 636 aa10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 PI4KAP2A4QPH2 592 aa10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 ST5P78524 1137 aa10.03□□□□□ -0.8
SNRPD1-201ENST00000300413 PI4KAP1Q8N8J0 262 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms