RNA–Protein interactions for RNA: ENST00000299162.9

FOXN4-201, Transcript of forkhead box N4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FOXN4, Length 3,350 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN4-201ENST00000299162 BRPF1P55201 1214 aaPredicted RBP12.46□□□□□ -0.41
FOXN4-201ENST00000299162 PAXIP1Q6ZW49 1069 aaPredicted RBP12.46□□□□□ -0.41
FOXN4-201ENST00000299162 ANKRD44Q8N8A2 993 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 PNMA6EA0A0J9YXQ4 647 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 PIP4K2AP48426 406 aaPredicted RBP12.46□□□□□ -0.41
FOXN4-201ENST00000299162 CHRNA2Q15822 529 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 DCTPP1Q9H773 170 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 PEAK1Q9H792 1746 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 NLRP2Q9NX02 1062 aa12.46□□□□□ -0.41
FOXN4-201ENST00000299162 PRAMEF22A3QJZ6 481 aa12.46□□□□□ -0.42
FOXN4-201ENST00000299162 GCP02774 474 aa12.46□□□□□ -0.42
FOXN4-201ENST00000299162 MON2Q7Z3U7 1717 aa12.45□□□□□ -0.42
FOXN4-201ENST00000299162 CRB1P82279 1406 aa12.45□□□□□ -0.42
FOXN4-201ENST00000299162 CHPF2Q9P2E5 772 aa12.45□□□□□ -0.42
FOXN4-201ENST00000299162 ARHGEF10O15013 1369 aa12.45□□□□□ -0.42
FOXN4-201ENST00000299162 RTL1A6NKG5 1358 aa12.45□□□□□ -0.42
FOXN4-201ENST00000299162 CDC45O75419 566 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 GNAI2P04899 355 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 FOXD4L5Q5VV16 416 aaPredicted RBP12.44□□□□□ -0.42
FOXN4-201ENST00000299162 FOXD4L4Q8WXT5 416 aaPredicted RBP12.44□□□□□ -0.42
FOXN4-201ENST00000299162 BTBD11A6QL63 1104 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 SDSP20132 328 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 AXIN2Q9Y2T1 843 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 SLC39A6Q13433 755 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 TPRNQ4KMQ1 711 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 C1orf141Q5JVX7 400 aa12.44□□□□□ -0.42
FOXN4-201ENST00000299162 FER1L4A9Z1Z3 1794 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 HMMRO75330 724 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 KRT28Q7Z3Y7 464 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 ANKRD24Q8TF21 1146 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 PTPRCP08575 1304 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 SSH2Q76I76 1423 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 RPAP2Q8IXW5 612 aaPredicted RBP12.43□□□□□ -0.42
FOXN4-201ENST00000299162 BBXQ8WY36 941 aaPredicted RBP12.43□□□□□ -0.42
FOXN4-201ENST00000299162 IP6K1Q92551 441 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 MAP3K5Q99683 1374 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 PI4KAP2A4QPH2 592 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 UBTFL1P0CB47 393 aaPredicted RBP12.43□□□□□ -0.42
FOXN4-201ENST00000299162 PI4KAP1Q8N8J0 262 aa12.43□□□□□ -0.42
FOXN4-201ENST00000299162 CCT4P50991 539 aaKnown RBP12.42□□□□□ -0.42
FOXN4-201ENST00000299162 OS9Q13438 667 aaPredicted RBP12.42□□□□□ -0.42
FOXN4-201ENST00000299162 TTC22Q5TAA0 569 aa12.42□□□□□ -0.42
FOXN4-201ENST00000299162 NAP1L2Q9ULW6 460 aaPredicted RBP12.42□□□□□ -0.42
FOXN4-201ENST00000299162 JARID2Q92833 1246 aaPredicted RBP12.42□□□□□ -0.42
FOXN4-201ENST00000299162 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
FOXN4-201ENST00000299162 SURF6O75683 361 aaKnown RBP12.41□□□□□ -0.42
FOXN4-201ENST00000299162 ANTXR1Q9H6X2 564 aa12.41□□□□□ -0.42
FOXN4-201ENST00000299162 MYL6BP14649 208 aa12.41□□□□□ -0.42
FOXN4-201ENST00000299162 TAF7LQ5H9L4 462 aa12.41□□□□□ -0.42
FOXN4-201ENST00000299162 ARHGAP23Q9P227 1491 aa12.4□□□□□ -0.42
FOXN4-201ENST00000299162 NBPF7P0C2Y1 421 aaPredicted RBP12.4□□□□□ -0.42
FOXN4-201ENST00000299162 RGS12O14924 1447 aa12.4□□□□□ -0.42
FOXN4-201ENST00000299162 KIAA0232Q92628 1395 aa12.4□□□□□ -0.42
FOXN4-201ENST00000299162 DTNBO60941 627 aa12.4□□□□□ -0.42
FOXN4-201ENST00000299162 NCLP19338 710 aaKnown RBP12.4□□□□□ -0.42
FOXN4-201ENST00000299162 PROSER3Q2NL68 480 aa12.4□□□□□ -0.42
FOXN4-201ENST00000299162 SRGAP3O43295 1099 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 TRAK2O60296 914 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 ATF3P18847 181 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 GTF2E1P29083 439 aaPredicted RBP12.39□□□□□ -0.43
FOXN4-201ENST00000299162 FOXD4L6Q3SYB3 417 aaPredicted RBP12.39□□□□□ -0.43
FOXN4-201ENST00000299162 FOXD4L3Q6VB84 417 aaPredicted RBP12.39□□□□□ -0.43
FOXN4-201ENST00000299162 KNDC1Q76NI1 1749 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 CHMP5Q9NZZ3 219 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 CCDC9Q9Y3X0 531 aaKnown RBP12.39□□□□□ -0.43
FOXN4-201ENST00000299162 SLIT1O75093 1534 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 PLEKHO1Q53GL0 409 aaPredicted RBP12.39□□□□□ -0.43
FOXN4-201ENST00000299162 CASC1Q6TDU7 716 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 KDRP35968 1356 aa12.39□□□□□ -0.43
FOXN4-201ENST00000299162 CWF19L2Q2TBE0 894 aaKnown RBP12.38□□□□□ -0.43
FOXN4-201ENST00000299162 LRRCC1Q9C099 1032 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 ANO2Q9NQ90 1003 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 ATP10DQ9P241 1426 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 PDE1AP54750 535 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 PPP1R42Q7Z4L9 355 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 KCNH5Q8NCM2 988 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 GNAI3P08754 354 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 KIF2CQ99661 725 aa12.38□□□□□ -0.43
FOXN4-201ENST00000299162 C9orf78Q9NZ63 289 aaPredicted RBP12.38□□□□□ -0.43
FOXN4-201ENST00000299162 MCM4P33991 863 aa12.37□□□□□ -0.43
FOXN4-201ENST00000299162 EIF4A1P60842 406 aaKnown RBP12.37□□□□□ -0.43
FOXN4-201ENST00000299162 PIK3C2AO00443 1686 aa12.37□□□□□ -0.43
FOXN4-201ENST00000299162 RBM25P49756 843 aaKnown RBP12.36□□□□□ -0.43
FOXN4-201ENST00000299162 RAPGEF4Q8WZA2 1011 aa12.36□□□□□ -0.43
FOXN4-201ENST00000299162 CHAMP1Q96JM3 812 aa12.36□□□□□ -0.43
FOXN4-201ENST00000299162 LARP6Q9BRS8 491 aaKnown RBP12.36□□□□□ -0.43
FOXN4-201ENST00000299162 SIL1Q9H173 461 aa12.36□□□□□ -0.43
FOXN4-201ENST00000299162 ZNF330Q9Y3S2 320 aaPredicted RBP12.36□□□□□ -0.43
FOXN4-201ENST00000299162 ESPNB1AK53 854 aa12.36□□□□□ -0.43
FOXN4-201ENST00000299162 UNC5CLQ8IV45 518 aa12.36□□□□□ -0.43
FOXN4-201ENST00000299162 PA2G4Q9UQ80 394 aaKnown RBP12.36□□□□□ -0.43
FOXN4-201ENST00000299162 FAM13BQ9NYF5 915 aa12.36□□□□□ -0.43
FOXN4-201ENST00000299162 MX1P20591 662 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 ARHGEF25Q86VW2 580 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 MAP3K2Q9Y2U5 619 aa12.35□□□□□ -0.43
FOXN4-201ENST00000299162 K7ELQ4 463 aaPredicted RBP12.35□□□□□ -0.43
FOXN4-201ENST00000299162 NFATC2IPQ8NCF5 419 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms