RNA–Protein interactions for RNA: ENST00000297933.10

GAPVD1-202, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GAPVD1, Length 6,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-202ENST00000297933 NAIPQ13075 1403 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 AEBP1Q8IUX7 1158 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 DACH1Q9UI36 760 aa8.17□□□□□ -1.1
GAPVD1-202ENST00000297933 TMPOP42166 694 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 BLOC1S2Q6QNY1 142 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 RABEP1Q15276 862 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 NBPF6Q5VWK0 638 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 NBPF5PQ86XG9 351 aaPredicted RBP8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 NBPF4Q96M43 638 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 NPHP3Q7Z494 1330 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 KRT32Q14532 448 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 ZBTB3Q9H5J0 574 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 IFT57Q9NWB7 429 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 ZNHIT6Q9NWK9 470 aaKnown RBP8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 LMTK3Q96Q04 1460 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 MNS1Q8NEH6 495 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 CABP5Q9NP86 173 aa8.16□□□□□ -1.1
GAPVD1-202ENST00000297933 ATP6V1AP38606 617 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 DCTN1Q14203 1278 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 NUTM1Q86Y26 1132 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 NAPBQ9H115 298 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 HDAC9Q9UKV0 1011 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 PDRG1Q9NUG6 133 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 PRXQ9BXM0 1461 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 LDHCP07864 332 aa8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 MPHOSPH6Q99547 160 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 SEPT11Q9NVA2 429 aaKnown RBP8.15□□□□□ -1.1
GAPVD1-202ENST00000297933 RAB11FIP3O75154 756 aa8.15□□□□□ -1.11
GAPVD1-202ENST00000297933 ME1P48163 572 aa8.15□□□□□ -1.11
GAPVD1-202ENST00000297933 MVPQ14764 893 aaKnown RBP8.15□□□□□ -1.11
GAPVD1-202ENST00000297933 SMARCC1Q92922 1105 aaPredicted RBP8.15□□□□□ -1.11
GAPVD1-202ENST00000297933 KIF1BPQ96EK5 621 aa8.15□□□□□ -1.11
GAPVD1-202ENST00000297933 TTC21BQ7Z4L5 1316 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 HLA-DOAP06340 250 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 PPM1FP49593 454 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 DDB1Q16531 1140 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 RPAP2Q8IXW5 612 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 ZCRB1Q8TBF4 217 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 SETDB2Q96T68 719 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 ACBD3Q9H3P7 528 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 DEF6Q9H4E7 631 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 LUC7LQ9NQ29 371 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 EMILIN1Q9Y6C2 1016 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 RANBP6O60518 1105 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 JAKMIP1Q96N16 626 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 PARP3Q9Y6F1 533 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 SPTY2D1Q68D10 685 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 DBF4Q9UBU7 674 aaPredicted RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 CEP57L1Q8IYX8 460 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 THUMPD2Q9BTF0 503 aaKnown RBP8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 CEP131Q9UPN4 1083 aa8.14□□□□□ -1.11
GAPVD1-202ENST00000297933 FIBPO43427 364 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 BAG3O95817 575 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 CWC25Q9NXE8 425 aaPredicted RBP8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 U3KPZ7 1027 aaPredicted RBP8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 ACEP12821 1306 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 CHD1LQ86WJ1 897 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 DNAAF4Q8WXU2 420 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 TFCP2L1Q9NZI6 479 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 NOS1P29475 1434 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 NF2P35240 595 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 CTCFLQ8NI51 663 aaPredicted RBP8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 ADGRF5Q8IZF2 1346 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 POTEJP0CG39 1038 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 LARP1BQ659C4 914 aaKnown RBP8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 IQCA1Q86XH1 822 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 TRIM5Q9C035 493 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 SERPINC1P01008 464 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 CCDC152Q4G0S7 254 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 TXLNBQ8N3L3 684 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 ZSCAN31Q96LW9 406 aaPredicted RBP8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 TSHZ2Q9NRE2 1034 aa8.13□□□□□ -1.11
GAPVD1-202ENST00000297933 HSPA2P54652 639 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 GSTO1P78417 241 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 NCKAP5LQ9HCH0 1330 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 BOLA2Q9H3K6 86 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 PPP1R12BO60237 982 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 PPFIBP1Q86W92 1011 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 RNF41Q9H4P4 317 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 SNRPA1P09661 255 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 ARGLU1Q9NWB6 273 aaPredicted RBP8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 DHX29Q7Z478 1369 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 NOM1Q5C9Z4 860 aaKnown RBP8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 OGFOD1Q8N543 542 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 VTI1AQ96AJ9 217 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 DRC1Q96MC2 740 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 EXOC6BQ9Y2D4 811 aa8.12□□□□□ -1.11
GAPVD1-202ENST00000297933 CCDC196A0A1B0GTZ2 297 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 TTF1Q15361 905 aaPredicted RBP8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 LDHAL6AQ6ZMR3 332 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 LRRC59Q96AG4 307 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 MAP3K2Q9Y2U5 619 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 NCOA1Q15788 1441 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 GLRX3O76003 335 aaKnown RBP8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 ERLIN2O94905 339 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 PTPN23Q9H3S7 1636 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 UHRF1BP1LA0JNW5 1464 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 CCP110O43303 1012 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 MBD3O95983 291 aa8.11□□□□□ -1.11
GAPVD1-202ENST00000297933 ASXL2Q76L83 1435 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms