RNA–Protein interactions for RNA: ENST00000295324.3

CDC42EP3-201, Transcript of CDC42 effector protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP3, Length 5,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-201ENST00000295324 TMEM132AQ24JP5 1023 aa21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 CWC27Q6UX04 472 aaKnown RBP21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 LMTK3Q96Q04 1460 aa21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 NAT10Q9H0A0 1025 aaKnown RBP21.03■□□□□ 0.96
CDC42EP3-201ENST00000295324 UHRF1BP1Q6BDS2 1440 aa21.02■□□□□ 0.96
CDC42EP3-201ENST00000295324 WWC2Q6AWC2 1192 aa21.02■□□□□ 0.96
CDC42EP3-201ENST00000295324 GOLGA6L1Q8N7Z2 621 aa21.02■□□□□ 0.96
CDC42EP3-201ENST00000295324 PTPRKQ15262 1439 aa21.02■□□□□ 0.96
CDC42EP3-201ENST00000295324 NUTM1Q86Y26 1132 aa21.02■□□□□ 0.96
CDC42EP3-201ENST00000295324 F6X3S4 739 aa21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 IMMTQ16891 758 aaKnown RBP21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 CWC25Q9NXE8 425 aaPredicted RBP21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 STK38Q15208 465 aa21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 DZIP1Q86YF9 867 aaKnown RBP21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 MAP3K12Q12852 859 aa21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 SLF2Q8IX21 1173 aa21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 SHANK2Q9UPX8 1470 aa21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 DDX46Q7L014 1031 aaKnown RBP21.01■□□□□ 0.95
CDC42EP3-201ENST00000295324 USP5P45974 858 aa21■□□□□ 0.95
CDC42EP3-201ENST00000295324 EPS15P42566 896 aa21■□□□□ 0.95
CDC42EP3-201ENST00000295324 KINO60870 393 aaKnown RBP21■□□□□ 0.95
CDC42EP3-201ENST00000295324 MX1P20591 662 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 CCDC70Q6NSX1 233 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 IL16Q14005 1332 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 WDHD1O75717 1129 aaPredicted RBP20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 KRT18P05783 430 aaKnown RBP20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 AEBP1Q8IUX7 1158 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 C6orf229H3BNL8 230 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 CRACR2BQ8N4Y2 399 aaPredicted RBP20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 NKTRP30414 1462 aaKnown RBP20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 IL2RBP14784 551 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 MAP3K2Q9Y2U5 619 aa20.99■□□□□ 0.95
CDC42EP3-201ENST00000295324 TCOF1Q13428 1488 aaKnown RBP20.98■□□□□ 0.95
CDC42EP3-201ENST00000295324 PIK3R4Q99570 1358 aa20.98■□□□□ 0.95
CDC42EP3-201ENST00000295324 POLR3DP05423 398 aaPredicted RBP20.98■□□□□ 0.95
CDC42EP3-201ENST00000295324 STK3Q13188 491 aa20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 LRRFIP2Q9Y608 721 aaKnown RBP20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 NOL7Q9UMY1 257 aaKnown RBP20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 AKAP4Q5JQC9 854 aa20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 CABLES1Q8TDN4 633 aa20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 ZSCAN31Q96LW9 406 aaPredicted RBP20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 U3KPZ7 1027 aaPredicted RBP20.97■□□□□ 0.95
CDC42EP3-201ENST00000295324 PRAG1Q86YV5 1406 aa20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 TRPM2O94759 1503 aa20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 ZNF219Q9P2Y4 722 aaPredicted RBP20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 RALGAPBQ86X10 1494 aa20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 OFD1O75665 1012 aa20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 LDHAL6AQ6ZMR3 332 aa20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 ST5P78524 1137 aa20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 JAKMIP1Q96N16 626 aaKnown RBP20.96■□□□□ 0.95
CDC42EP3-201ENST00000295324 MBD3O95983 291 aa20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 NBPF6Q5VWK0 638 aa20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 ANKRD13DQ6ZTN6 518 aa20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 NBPF5PQ86XG9 351 aaPredicted RBP20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 NBPF4Q96M43 638 aa20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 BOLA2Q9H3K6 86 aa20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 MBIPQ9NS73 344 aa20.95■□□□□ 0.95
CDC42EP3-201ENST00000295324 FLT4P35916 1363 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 GCP02774 474 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 FAM83GA6ND36 823 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 GSE1Q14687 1217 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 PDRG1Q9NUG6 133 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 FBLN1P23142 703 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 ATP6V1AP38606 617 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 MKNK2Q9HBH9 465 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 DISP1Q96F81 1524 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 CT47A1Q5JQC4 288 aaPredicted RBP20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 CCAR2Q8N163 923 aaKnown RBP20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 ACSBG1Q96GR2 724 aa20.95■□□□□ 0.94
CDC42EP3-201ENST00000295324 PI4KAP2A4QPH2 592 aa20.94■□□□□ 0.94
CDC42EP3-201ENST00000295324 PI4KAP1Q8N8J0 262 aa20.94■□□□□ 0.94
CDC42EP3-201ENST00000295324 NAPBQ9H115 298 aa20.94■□□□□ 0.94
CDC42EP3-201ENST00000295324 ATP5J2-PTCD1G3V325 749 aa20.94■□□□□ 0.94
CDC42EP3-201ENST00000295324 MPHOSPH10O00566 681 aaKnown RBP20.94■□□□□ 0.94
CDC42EP3-201ENST00000295324 WASF1Q92558 559 aa20.94■□□□□ 0.94
CDC42EP3-201ENST00000295324 LDHCP07864 332 aa20.93■□□□□ 0.94
CDC42EP3-201ENST00000295324 UBE3BQ7Z3V4 1068 aa20.93■□□□□ 0.94
CDC42EP3-201ENST00000295324 CEP170Q5SW79 1584 aa20.93■□□□□ 0.94
CDC42EP3-201ENST00000295324 ZNF622Q969S3 477 aaKnown RBP eCLIP20.93■□□□□ 0.94
CDC42EP3-201ENST00000295324 NPATQ14207 1427 aa20.92■□□□□ 0.94
CDC42EP3-201ENST00000295324 MINDY4BA8MYZ0 360 aa20.92■□□□□ 0.94
CDC42EP3-201ENST00000295324 PIP4K2AP48426 406 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP3-201ENST00000295324 LETM1O95202 739 aaPredicted RBP20.92■□□□□ 0.94
CDC42EP3-201ENST00000295324 EIF4A2Q14240 407 aaKnown RBP20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 CCDC8Q9H0W5 538 aaPredicted RBP20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 LARP1BQ659C4 914 aaKnown RBP20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 SETDB2Q96T68 719 aa20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 WDR33Q9C0J8 1336 aaKnown RBP20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 CCDC152Q4G0S7 254 aa20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 ODF2Q5BJF6 829 aa20.91■□□□□ 0.94
CDC42EP3-201ENST00000295324 FIBPO43427 364 aa20.9■□□□□ 0.94
CDC42EP3-201ENST00000295324 KRI1Q8N9T8 703 aaKnown RBP20.9■□□□□ 0.94
CDC42EP3-201ENST00000295324 PDIA4P13667 645 aaKnown RBP20.9■□□□□ 0.94
CDC42EP3-201ENST00000295324 HOMER1Q86YM7 354 aa20.9■□□□□ 0.94
CDC42EP3-201ENST00000295324 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.94
CDC42EP3-201ENST00000295324 CEBPZQ03701 1054 aaKnown RBP20.89■□□□□ 0.94
CDC42EP3-201ENST00000295324 POLKQ9UBT6 870 aa20.89■□□□□ 0.94
CDC42EP3-201ENST00000295324 TRIM27P14373 513 aa20.89■□□□□ 0.93
CDC42EP3-201ENST00000295324 ZNF76P36508 570 aa20.89■□□□□ 0.93
CDC42EP3-201ENST00000295324 TTF1Q15361 905 aaPredicted RBP20.89■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms