RNA–Protein interactions for RNA: ENST00000288344.14

HMGN1-201, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,303 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-201ENST00000288344 DIAPH1O60610 1272 aaKnown RBP12.4□□□□□ -0.42
HMGN1-201ENST00000288344 LRRC4BQ9NT99 713 aa12.4□□□□□ -0.42
HMGN1-201ENST00000288344 TXNRD1Q16881 649 aa12.39□□□□□ -0.43
HMGN1-201ENST00000288344 ZBTB47Q9UFB7 747 aaPredicted RBP12.39□□□□□ -0.43
HMGN1-201ENST00000288344 SPG7Q9UQ90 795 aa12.39□□□□□ -0.43
HMGN1-201ENST00000288344 ITGB4P16144 1822 aa12.39□□□□□ -0.43
HMGN1-201ENST00000288344 IFNL2Q8IZJ0 200 aa12.38□□□□□ -0.43
HMGN1-201ENST00000288344 DOT1LQ8TEK3 1739 aa12.38□□□□□ -0.43
HMGN1-201ENST00000288344 LY75O60449 1722 aa12.38□□□□□ -0.43
HMGN1-201ENST00000288344 AMOTQ4VCS5 1084 aa12.37□□□□□ -0.43
HMGN1-201ENST00000288344 PIGBQ92521 554 aa12.37□□□□□ -0.43
HMGN1-201ENST00000288344 ANO8Q9HCE9 1232 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-201ENST00000288344 CIZ1Q9ULV3 898 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-201ENST00000288344 PAPPAQ13219 1627 aa12.37□□□□□ -0.43
HMGN1-201ENST00000288344 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-201ENST00000288344 PLEKHO1Q53GL0 409 aaPredicted RBP12.37□□□□□ -0.43
HMGN1-201ENST00000288344 RSPH6AQ9H0K4 717 aa12.37□□□□□ -0.43
HMGN1-201ENST00000288344 ADAMTS7Q9UKP4 1686 aa12.36□□□□□ -0.43
HMGN1-201ENST00000288344 ERVV-2B6SEH9 535 aa12.36□□□□□ -0.43
HMGN1-201ENST00000288344 HMOX1P09601 288 aa12.36□□□□□ -0.43
HMGN1-201ENST00000288344 NUBP1P53384 320 aa12.36□□□□□ -0.43
HMGN1-201ENST00000288344 CNGB1Q14028 1251 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-201ENST00000288344 RALBP1Q15311 655 aa12.36□□□□□ -0.43
HMGN1-201ENST00000288344 MTHFSDQ2M296 383 aaKnown RBP12.36□□□□□ -0.43
HMGN1-201ENST00000288344 BBXQ8WY36 941 aaPredicted RBP12.36□□□□□ -0.43
HMGN1-201ENST00000288344 DCAF5Q96JK2 942 aa12.35□□□□□ -0.43
HMGN1-201ENST00000288344 PHACTR3Q96KR7 559 aa12.35□□□□□ -0.43
HMGN1-201ENST00000288344 ZNF316A6NFI3 1004 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-201ENST00000288344 SLC27A3Q5K4L6 730 aa12.34□□□□□ -0.43
HMGN1-201ENST00000288344 PLEKHF1Q96S99 279 aa12.34□□□□□ -0.43
HMGN1-201ENST00000288344 PRKRIP1Q9H875 184 aaPredicted RBP12.34□□□□□ -0.43
HMGN1-201ENST00000288344 LGR6Q9HBX8 967 aa12.34□□□□□ -0.43
HMGN1-201ENST00000288344 ATG3Q9NT62 314 aa12.34□□□□□ -0.43
HMGN1-201ENST00000288344 FCHSD2O94868 740 aa12.33□□□□□ -0.44
HMGN1-201ENST00000288344 MNX1P50219 401 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-201ENST00000288344 R3HDM1Q15032 1099 aaKnown RBP12.33□□□□□ -0.44
HMGN1-201ENST00000288344 AKAP4Q5JQC9 854 aa12.33□□□□□ -0.44
HMGN1-201ENST00000288344 MPRIPQ6WCQ1 1025 aa12.33□□□□□ -0.44
HMGN1-201ENST00000288344 SLC4A9Q96Q91 983 aa12.33□□□□□ -0.44
HMGN1-201ENST00000288344 PDGFDQ9GZP0 370 aaPredicted RBP12.33□□□□□ -0.44
HMGN1-201ENST00000288344 SCN11AQ9UI33 1791 aa12.32□□□□□ -0.44
HMGN1-201ENST00000288344 PSDA5PKW4 1024 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-201ENST00000288344 KCNQ4P56696 695 aa12.32□□□□□ -0.44
HMGN1-201ENST00000288344 SLC15A2Q16348 729 aa12.32□□□□□ -0.44
HMGN1-201ENST00000288344 ZNF530Q6P9A1 599 aaPredicted RBP12.32□□□□□ -0.44
HMGN1-201ENST00000288344 IL17REQ8NFR9 667 aa12.32□□□□□ -0.44
HMGN1-201ENST00000288344 ASAP1Q9ULH1 1129 aa12.32□□□□□ -0.44
HMGN1-201ENST00000288344 HSP90AB1P08238 724 aaKnown RBP12.31□□□□□ -0.44
HMGN1-201ENST00000288344 ZNF827Q17R98 1081 aa12.31□□□□□ -0.44
HMGN1-201ENST00000288344 SYTL4Q96C24 671 aaPredicted RBP12.31□□□□□ -0.44
HMGN1-201ENST00000288344 CFAP53Q96M91 514 aa12.31□□□□□ -0.44
HMGN1-201ENST00000288344 CASZ1Q86V15 1759 aa12.3□□□□□ -0.44
HMGN1-201ENST00000288344 C19orf67A6NJJ6 358 aa12.3□□□□□ -0.44
HMGN1-201ENST00000288344 RNMTO43148 476 aaKnown RBP12.3□□□□□ -0.44
HMGN1-201ENST00000288344 TAF1LQ8IZX4 1826 aa12.3□□□□□ -0.44
HMGN1-201ENST00000288344 MRC1P22897 1456 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 ZNF831Q5JPB2 1677 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 U2SURPO15042 1029 aaKnown RBP12.29□□□□□ -0.44
HMGN1-201ENST00000288344 PRKAR2BP31323 418 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 NBPF14Q5TI25 921 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 NFATC2IPQ8NCF5 419 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 MYBBP1AQ9BQG0 1328 aaKnown RBP12.29□□□□□ -0.44
HMGN1-201ENST00000288344 CEMIPQ8WUJ3 1361 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 PALLDQ8WX93 1383 aa12.29□□□□□ -0.44
HMGN1-201ENST00000288344 VIRMAQ69YN4 1812 aaKnown RBP12.28□□□□□ -0.44
HMGN1-201ENST00000288344 AMIGO3Q86WK7 504 aa12.28□□□□□ -0.44
HMGN1-201ENST00000288344 SMARCC1Q92922 1105 aaPredicted RBP12.28□□□□□ -0.44
HMGN1-201ENST00000288344 SGIP1Q9BQI5 828 aa12.28□□□□□ -0.44
HMGN1-201ENST00000288344 TMOD3Q9NYL9 352 aa12.28□□□□□ -0.44
HMGN1-201ENST00000288344 NUDCQ9Y266 331 aa12.28□□□□□ -0.44
HMGN1-201ENST00000288344 QSER1Q2KHR3 1735 aa12.28□□□□□ -0.44
HMGN1-201ENST00000288344 LOC102724428A0A0B4J2F2 783 aa12.27□□□□□ -0.45
HMGN1-201ENST00000288344 U2AF1L5P0DN76 240 aaPredicted RBP12.27□□□□□ -0.45
HMGN1-201ENST00000288344 SIK1P57059 783 aa12.27□□□□□ -0.45
HMGN1-201ENST00000288344 U2AF1Q01081 240 aaKnown RBP eCLIP12.27□□□□□ -0.454e-7■■■■■ 29.1
HMGN1-201ENST00000288344 ITPK1Q13572 414 aa12.27□□□□□ -0.45
HMGN1-201ENST00000288344 COL24A1Q17RW2 1714 aa12.27□□□□□ -0.45
HMGN1-201ENST00000288344 SLC52A2Q9HAB3 445 aa12.27□□□□□ -0.45
HMGN1-201ENST00000288344 UTRNP46939 3433 aa12.27□□□□□ -0.45
HMGN1-201ENST00000288344 SIPA1L3O60292 1781 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-201ENST00000288344 CD44P16070 742 aaKnown RBP12.26□□□□□ -0.45
HMGN1-201ENST00000288344 CCDC184Q52MB2 194 aa12.26□□□□□ -0.45
HMGN1-201ENST00000288344 C1orf141Q5JVX7 400 aa12.26□□□□□ -0.45
HMGN1-201ENST00000288344 CCNL1Q9UK58 526 aaPredicted RBP12.26□□□□□ -0.45
HMGN1-201ENST00000288344 TUBGCP6Q96RT7 1819 aa12.26□□□□□ -0.45
HMGN1-201ENST00000288344 LRP5O75197 1615 aa12.25□□□□□ -0.45
HMGN1-201ENST00000288344 PNPLA7Q6ZV29 1317 aa12.25□□□□□ -0.45
HMGN1-201ENST00000288344 PTGER2P43116 358 aa12.25□□□□□ -0.45
HMGN1-201ENST00000288344 CABP4P57796 275 aa12.25□□□□□ -0.45
HMGN1-201ENST00000288344 GAS2L2Q8NHY3 880 aa12.25□□□□□ -0.45
HMGN1-201ENST00000288344 RNF25Q96BH1 459 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-201ENST00000288344 GOLGB1Q14789 3259 aaKnown RBP12.25□□□□□ -0.45
HMGN1-201ENST00000288344 CICQ96RK0 1608 aaPredicted RBP12.25□□□□□ -0.45
HMGN1-201ENST00000288344 MYH14Q7Z406 1995 aaKnown RBP12.24□□□□□ -0.45
HMGN1-201ENST00000288344 GNAT3A8MTJ3 354 aa12.24□□□□□ -0.45
HMGN1-201ENST00000288344 HTATSF1O43719 755 aaKnown RBP12.24□□□□□ -0.45
HMGN1-201ENST00000288344 LINC00116Q8NCU8 138 aa12.24□□□□□ -0.45
HMGN1-201ENST00000288344 STK32BQ9NY57 414 aa12.24□□□□□ -0.45
HMGN1-201ENST00000288344 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.24□□□□□ -0.45
HMGN1-201ENST00000288344 MAP3K5Q99683 1374 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms