RNA–Protein interactions for RNA: ENST00000287936.8

HMGCR-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCR, Length 4,585 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-201ENST00000287936 ERC1Q8IUD2 1116 aa12.19□□□□□ -0.46
HMGCR-201ENST00000287936 PDE1AP54750 535 aa12.19□□□□□ -0.46
HMGCR-201ENST00000287936 CLASRPQ8N2M8 674 aaKnown RBP12.19□□□□□ -0.46
HMGCR-201ENST00000287936 ANKRD26Q9UPS8 1709 aa12.19□□□□□ -0.46
HMGCR-201ENST00000287936 CCDC173Q0VFZ6 552 aa12.18□□□□□ -0.46
HMGCR-201ENST00000287936 C16orf71Q8IYS4 520 aaPredicted RBP12.18□□□□□ -0.46
HMGCR-201ENST00000287936 MAP3K5Q99683 1374 aa12.18□□□□□ -0.46
HMGCR-201ENST00000287936 ATP8B2P98198 1209 aa12.18□□□□□ -0.46
HMGCR-201ENST00000287936 LRRFIP2Q9Y608 721 aaKnown RBP12.18□□□□□ -0.46
HMGCR-201ENST00000287936 FOXO3O43524 673 aa12.18□□□□□ -0.46
HMGCR-201ENST00000287936 USP26Q9BXU7 913 aa12.18□□□□□ -0.46
HMGCR-201ENST00000287936 LTKP29376 864 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 G3BP1Q13283 466 aaKnown RBP eCLIP12.17□□□□□ -0.462e-9■□□□□ 9.9
HMGCR-201ENST00000287936 KIF1BPQ96EK5 621 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 RTL1A6NKG5 1358 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 REREQ9P2R6 1566 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 ZKSCAN1P17029 563 aaPredicted RBP12.17□□□□□ -0.46
HMGCR-201ENST00000287936 CAVIN1Q6NZI2 390 aaKnown RBP12.17□□□□□ -0.46
HMGCR-201ENST00000287936 SRGAP3O43295 1099 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 AMOTQ4VCS5 1084 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 TECPR2O15040 1411 aa12.17□□□□□ -0.46
HMGCR-201ENST00000287936 BAG4O95429 457 aaKnown RBP12.16□□□□□ -0.46
HMGCR-201ENST00000287936 RBM42Q9BTD8 480 aaKnown RBP12.16□□□□□ -0.46
HMGCR-201ENST00000287936 PRPF40AO75400 957 aaKnown RBP12.16□□□□□ -0.46
HMGCR-201ENST00000287936 BTBD11A6QL63 1104 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 HOXC9P31274 260 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 GOLGA6L4A6NEF3 574 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 XRCC6P12956 609 aaKnown RBP eCLIP12.16□□□□□ -0.467e-11■■■■■ 29.3
HMGCR-201ENST00000287936 FGD1P98174 961 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 KLHL40Q2TBA0 621 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 SIRT2Q8IXJ6 389 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 DIP2BQ9P265 1576 aa12.16□□□□□ -0.46
HMGCR-201ENST00000287936 RAPGEF4Q8WZA2 1011 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 GSPT1P15170 499 aaKnown RBP12.15□□□□□ -0.46
HMGCR-201ENST00000287936 IL1RAPL2Q9NP60 686 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.15□□□□□ -0.46
HMGCR-201ENST00000287936 HIP1O00291 1037 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 ANAPC15P60006 121 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 TPRNQ4KMQ1 711 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 DNAAF4Q8WXU2 420 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 MYO5BQ9ULV0 1848 aa12.15□□□□□ -0.46
HMGCR-201ENST00000287936 G2E3Q7L622 706 aa12.15□□□□□ -0.47
HMGCR-201ENST00000287936 SMC3Q9UQE7 1217 aa12.15□□□□□ -0.47
HMGCR-201ENST00000287936 USHBP1Q8N6Y0 703 aa12.14□□□□□ -0.47
HMGCR-201ENST00000287936 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
HMGCR-201ENST00000287936 RNF20Q5VTR2 975 aa12.14□□□□□ -0.47
HMGCR-201ENST00000287936 TTC5Q8N0Z6 440 aa12.14□□□□□ -0.47
HMGCR-201ENST00000287936 ESYT1Q9BSJ8 1104 aa12.14□□□□□ -0.47
HMGCR-201ENST00000287936 CPS1P31327 1500 aa12.13□□□□□ -0.47
HMGCR-201ENST00000287936 IGSF1Q8N6C5 1336 aa12.13□□□□□ -0.47
HMGCR-201ENST00000287936 RIC3Q7Z5B4 369 aa12.13□□□□□ -0.47
HMGCR-201ENST00000287936 OTUD7AQ8TE49 926 aaPredicted RBP12.13□□□□□ -0.47
HMGCR-201ENST00000287936 GLRX3O76003 335 aaKnown RBP12.13□□□□□ -0.47
HMGCR-201ENST00000287936 NUTM1Q86Y26 1132 aa12.13□□□□□ -0.47
HMGCR-201ENST00000287936 DBF4Q9UBU7 674 aaPredicted RBP12.12□□□□□ -0.47
HMGCR-201ENST00000287936 AOX1Q06278 1338 aa12.12□□□□□ -0.47
HMGCR-201ENST00000287936 USP31Q70CQ4 1352 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 DNTTIP2Q5QJE6 756 aaKnown RBP12.11□□□□□ -0.47
HMGCR-201ENST00000287936 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 ITSN1Q15811 1721 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 ESPNB1AK53 854 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 HOXB7P09629 217 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 KCNA6P17658 529 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 MAP2P11137 1827 aaKnown RBP12.11□□□□□ -0.47
HMGCR-201ENST00000287936 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
HMGCR-201ENST00000287936 PSMA5P28066 241 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 IP6K1Q92551 441 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 OVOS2A0A0J9YW53 1432 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 OVOS2Q6IE36 1432 aa12.11□□□□□ -0.47
HMGCR-201ENST00000287936 PLCB2Q00722 1185 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 KIAA2012Q0VF49 1180 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 RHPN1Q8TCX5 695 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 NLRP2Q9NX02 1062 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 RIMBP3CA6NJZ7 1639 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 RIMBP3BA6NNM3 1639 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 RIMBP3Q9UFD9 1639 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 AIMP1Q12904 312 aaKnown RBP12.1□□□□□ -0.47
HMGCR-201ENST00000287936 AKAP4Q5JQC9 854 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 OSBPL3Q9H4L5 887 aa12.1□□□□□ -0.47
HMGCR-201ENST00000287936 FOXD4L6Q3SYB3 417 aaPredicted RBP12.1□□□□□ -0.47
HMGCR-201ENST00000287936 FOXD4L3Q6VB84 417 aaPredicted RBP12.1□□□□□ -0.47
HMGCR-201ENST00000287936 LETM1O95202 739 aaPredicted RBP12.09□□□□□ -0.47
HMGCR-201ENST00000287936 TATP17735 454 aaPredicted RBP12.09□□□□□ -0.47
HMGCR-201ENST00000287936 TMX3Q96JJ7 454 aa12.09□□□□□ -0.47
HMGCR-201ENST00000287936 ANKARQ7Z5J8 1434 aa12.09□□□□□ -0.47
HMGCR-201ENST00000287936 MAP4K4O95819 1239 aaPredicted RBP12.09□□□□□ -0.47
HMGCR-201ENST00000287936 TSHZ3Q63HK5 1081 aa12.09□□□□□ -0.47
HMGCR-201ENST00000287936 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
HMGCR-201ENST00000287936 ZSCAN31Q96LW9 406 aaPredicted RBP12.09□□□□□ -0.47
HMGCR-201ENST00000287936 HYPKQ9NX55 129 aa12.09□□□□□ -0.47
HMGCR-201ENST00000287936 PI4KAP2A4QPH2 592 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 EPB41L2O43491 1005 aaKnown RBP12.08□□□□□ -0.48
HMGCR-201ENST00000287936 ALDH1L1O75891 902 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 CHMLP26374 656 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 PI4KAP1Q8N8J0 262 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 CYP46A1Q9Y6A2 500 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.08□□□□□ -0.48
HMGCR-201ENST00000287936 TSPY26PQ9H489 355 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 CHMP3Q9Y3E7 222 aa12.08□□□□□ -0.48
HMGCR-201ENST00000287936 ADAMTS13Q76LX8 1427 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms